ZMP
si:dkey-30j10.4
Ensembl ID:
ZFIN ID:
Description:
cDNA, clone cssl:d0330 [Source:UniProtKB/TrEMBL;Acc:A8BB00]
Human Orthologues:
LRRC3, LRRC3B
Human Descriptions:
leucine rich repeat containing 3 [Source:HGNC Symbol;Acc:14965]
leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:28105]
leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:28105]
Mouse Orthologues:
Lrrc3, Lrrc3b
Mouse Descriptions:
leucine rich repeat containing 3 Gene [Source:MGI Symbol;Acc:MGI:2447899]
leucine rich repeat containing 3B Gene [Source:MGI Symbol;Acc:MGI:2384996]
leucine rich repeat containing 3B Gene [Source:MGI Symbol;Acc:MGI:2384996]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15295 | Nonsense | Available for shipment | Available now |
sa26027 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa6030 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa15295
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000113421 | Nonsense | 19 | 262 | 1 | 1 |
ENSDART00000147418 | Nonsense | 20 | 204 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 3 (position 16393503)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 16623722 |
GRCz11 | 3 | 16773522 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCCATCCCATGGCCAGCTGCCTTTCTCTCACTCTCACCCTTTTTKTGTA[T/A]CAACTGGATGTGTGTGTGTCTKACTCCCACCACGAAGAATGCCCTGAGAG
Long Flanking Sequence:
AACCCCATGTCATTACACAGATTTGTGTCCTGATATTTAACACACACACACACACACACACACACACACATACGCTCTAAGTATTTGTATAGGGATATTATTACAGTAGACATTACTGAATGCAAAAAATTTGTGAACACTGAAAAACAATACAATAAAACCCAACACAGCAAAAAAAAAAAAAAAAAAACTGCATACATATACACAGTTTCCCTTATTATTTCTTTCTCGTCCCTGCACATCTGAAGATTGCAGCCAAGTTTGCGTCGTAACAAGCAGTTTCCCGATGGCGATTAACCAAACAAGTGCCCATTTACCCTCTAAATAACTCTGCAATCAGCAAAGCGCACCGATAGCAGGCTGTCAGTTGTAATGACTGCTTCTCTTCTCTCTTTATTTCGAGCTTGATGTTCGGGCCCGATCTGCTTCCTCTGGGAGGGCATGATGGGCTGCCATCCCATGGCCAGCTGCCTTTCTCTCACTCTCACCCTTTTTTTGTA[T/A]CAACTGGATGTGTGTGTGTCTGACTCCCACCACGAAGAATGCCCTGAGAGCTGTTTCTGCACTGAGGGTATCAACAGTGGCCTGGTGGTTCACTGCAGCTCCATGCACTTAACTGCAGTGCCACGTGACCTTCCCAACACCACACAGCATCTATACCTAGACAACAATTTGCTGCTCACCATACCGTCCGATGCATTCAAAGGGCTCCCGCTGCTGTTCAAACTGGATCTTTCCCACAACCGGTTGGTCGGTTTGGAGCATGGAGCCTTTCGAGACCTTGCAGACTCTCTGCGCAGCCTGGATCTTTCCTCTAATCTACTGGAGACACTGGACCCCGGGGCGTTCGGCGACCTCAGAGCGCAGACTAACCTCTCTCAAAACCGCTGGCTGTGTGACTGCCGCCTGCAGCTGGCAATGCCACAGCTGCTGCTGGATCCGTCGTCTCTTGCTGAGGTTATGTGCAATTCTTCTGAACCCCAAGAGCTGGGGGCTCAGGGTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26027
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000113421 | Nonsense | 186 | 262 | 1 | 1 |
ENSDART00000147418 | Nonsense | 187 | 204 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 3 (position 16394003)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 16624222 |
GRCz11 | 3 | 16774022 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAGGTTATGTGCAATTCTTCTGAACCCCAAGAGCTGGGGGCTCAGGGTT[T/A]GCCCTTCATCCTGGTGGCGACTGATTTGGATTTTTGTGCAACCATCAGGA
Long Flanking Sequence:
TCAACTGGATGTGTGTGTGTCTGACTCCCACCACGAAGAATGCCCTGAGAGCTGTTTCTGCACTGAGGGTATCAACAGTGGCCTGGTGGTTCACTGCAGCTCCATGCACTTAACTGCAGTGCCACGTGACCTTCCCAACACCACACAGCATCTATACCTAGACAACAATTTGCTGCTCACCATACCGTCCGATGCATTCAAAGGGCTCCCGCTGCTGTTCAAACTGGATCTTTCCCACAACCGGTTGGTCGGTTTGGAGCATGGAGCCTTTCGAGACCTTGCAGACTCTCTGCGCAGCCTGGATCTTTCCTCTAATCTACTGGAGACACTGGACCCCGGGGCGTTCGGCGACCTCAGAGCGCAGACTAACCTCTCTCAAAACCGCTGGCTGTGTGACTGCCGCCTGCAGCTGGCAATGCCACAGCTGCTGCTGGATCCGTCGTCTCTTGCTGAGGTTATGTGCAATTCTTCTGAACCCCAAGAGCTGGGGGCTCAGGGTT[T/A]GCCCTTCATCCTGGTGGCGACTGATTTGGATTTTTGTGCAACCATCAGGAGGACTACTGACGTGGCGATGCTGATAACCATGTTCGGGTGGTTTACGATGGTTATTTCCTATTTAGTTTACTATATAAGGCACAACCAGGAAGATGCAATCCGCCACTTGGAGTATTTGAAGTCTCTGCCCAACAGGCAAGGCAGGTATGAGGAGGCTTTGACACTGAACACGTGGCTTTAGTGGAGTTAAGAGTGACCATTACTAGGAATTACTAGTTACTAAAATAACACTTATAATAACTAGGCATGCTCCGATTAGGAGTTTTGCAGCTGATACCAATTATCGATTCTTTGTCATGATGATTGACTGATACTGAGTACCGATTCTGATGCTCCAAGCTTTATAATGCATTAAGCATATTTTCACTCCAAGTATCATACTTAAGGGGAGATCTCTCCTTACCTAAGGGAATAAATGAAGGATGTTGCATATAACTTCATAAACGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6030
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000113421 | Nonsense | 195 | 262 | 1 | 1 |
ENSDART00000147418 | Nonsense | 196 | 204 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 3 (position 16394030)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 16624249 |
GRCz11 | 3 | 16774049 |
KASP Assay ID:
554-3654.1 (used for ordering genotyping assays)
KASP Sequence:
CCAAGAGCTGGGGGCTCAGGGTTTGCCCTTCATCCTGGTGGCGACTGATT[T/A]GGATTTTTGYGCARCCATCAGGAGGACTACTGACGTGGCGATGCTGATAA
Long Flanking Sequence:
CCACCACGAAGAATGCCCTGAGAGCTGTTTCTGCACTGAGGGTATCAACAGTGGCCTGGTGGTTCACTGCAGCTCCATGCACTTAACTGCAGTGCCACGTGACCTTCCCAACACCACACAGCATCTATACCTAGACAACAATTTGCTGCTCACCATACCGTCCGATGCATTCAAAGGGCTCCCGCTGCTGTTCAAACTGGATCTTTCCCACAACCGGTTGGTCGGTTTGGAGCATGGAGCCTTTCGAGACCTTGCAGACTCTCTGCGCAGCCTGGATCTTTCCTCTAATCTACTGGAGACACTGGACCCCGGGGCGTTCGGCGACCTCAGAGCGCAGACTAACCTCTCTCAAAACCGCTGGCTGTGTGACTGCCGCCTGCAGCTGGCAATGCCACAGCTGCTGCTGGATCCGTCGTCTCTTGCTGAGGTTATGTGCAATTCTTCTGAACCCCAAGAGCTGGGGGCTCAGGGTTTGCCCTTCATCCTGGTGGCGACTGATT[T/A]GGATTTTTGTGCAACCATCAGGAGGACTACTGACGTGGCGATGCTGATAACCATGTTCGGGTGGTTTACGATGGTTATTTCCTATTTAGTTTACTATATAAGGCACAACCAGGAAGATGCAATCCGCCACTTGGAGTATTTGAAGTCTCTGCCCAACAGGCAAGGCAGGTATGAGGAGGCTTTGACACTGAACACGTGGCTTTAGTGGAGTTAAGAGTGACCATTACTAGGAATTACTAGTTACTAAAATAACACTTATAATAACTAGGCATGCTCCGATTAGGAGTTTTGCAGCTGATACCAATTATCGATTCTTTGTCATGATGATTGACTGATACTGAGTACCGATTCTGATGCTCCAAGCTTTATAATGCATTAAGCATATTTTCACTCCAAGTATCATACTTAAGGGGAGATCTCTCCTTACCTAAGGGAATAAATGAAGGATGTTGCATATAACTTCATAAACGTGTCTCTTATAGGCCGAAAGGTGTAGACTT
Associated Phenotype:
Not determined