ZMP
zgc:171558
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC100141331 [Source:RefSeq peptide;Acc:NP_001108368]
Human Orthologue:
RAPGEF4
Human Description:
Rap guanine nucleotide exchange factor (GEF) 4 [Source:HGNC Symbol;Acc:16626]
Mouse Orthologue:
Rapgef4
Mouse Description:
Rap guanine nucleotide exchange factor (GEF) 4 Gene [Source:MGI Symbol;Acc:MGI:1917723]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44629 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa44629
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111024 | Essential Splice Site | 333 | 427 | 9 | 13 |
Genomic Location (Zv9):
Chromosome 6 (position 6817621)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 6743637 |
| GRCz11 | 6 | 6900806 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTCTCAGATTGGCCCTGACGCGCACATGCGCATGATCCTCAGGAAACC[G/A]TGAGTGAACCACCGCGCCGCCCGCTGGGTGCATTAAAAATGTTAAATTTT
Long Flanking Sequence:
TGCATAAAACATGTGCTGGATAAGTTGGCGGTTCATACCGTTGCGGCGACCCCTTATTAAAAAAGGGACTAAGTCGAAAAAAGAAATATGAATGAATGAATCTCATAAAGTAAACAATGACAGAATTTTAATTGTTGGGTGAATTATTCCTTTAAGTTTTAATTCTACTCAGTGCTATTTGCTCAGCTCTTGCTGTTTGATTTCTACACTTTATAATAGGAATGACCCTCTCAAAGTTTGACAAAACAACCTCATTAACTTGACTCCAATTAAAGCATCTCTTTATCTCTACTTTTCTTTCTCGTTATGTGGGCAGTCGACCATGAACTCAACTTTCAAGATAAGTACCTCTTTTACCGTTTCCTCGACGATGAGGAGGAGGATGCGGTGTTGCCTAGCGACGATGAGAAACGCGAAGCTGAGGAAGAGCTGCAGGAGACACTCCTCTTCCTCTCTCAGATTGGCCCTGACGCGCACATGCGCATGATCCTCAGGAAACC[G/A]TGAGTGAACCACCGCGCCGCCCGCTGGGTGCATTAAAAATGTTAAATTTTTTTTTTTTTTTTTTTTGCATTTGTAAATTACAATTACAGGAAAAAACGCATCAAAAGCAAAATTTCCACAGATAATTAAAATTTAAATCAAAGAAACATAAACAAAATGAAAGACTTTCACAACACGCCACATGCATGAGTAATATCACAGGAGTAGCTTAAAAATATGGCTGTATATCGACACTGGTGTCCAATCAGTGCTGACATACAGCCACATCGCACTGTTACTCGTGAGATATTGCATTTATATAACAGTTCAACGGCATAATCATGTATATAAAAAAGAAATCAAACACAGAGAGTCCAAAAACCCCTTTTGTAAGAGGAACTACTTCCTTCTGTCAATCTTACACATCTGCAGCCGATGTCAGAACAGCTGAAACCGTTCACAAACGTCACTTTAGAGCTAGTATTTGAATGATTCTTTAGCGTAATGTCTAAAGTGATGAC
Associated Phenotype:
Not determined