ZMP

rfx1b

Ensembl ID:

ENSDARG00000075904

ZFIN ID:

ZDB-GENE-041008-101

Human Orthologue:

RFX1

Human Description:

regulatory factor X, 1 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9982]

Mouse Orthologue:

Rfx1

Mouse Description:

regulatory factor X, 1 (influences HLA class II expression) Gene [Source:MGI Symbol;Acc:MGI:105982]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa39704	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa39704

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000005646	Nonsense	312	821	6	17

Genomic Location (Zv9):

Chromosome 1 (position 54665402)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	53438905
GRCz11	1	54098648

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGAGTAAGTCTTCCTCGCTGTACTCTATACTGTCATTACCTCCTGCACTG[C/A]CAGCAGACCAAACTGGAACCCGTGAACGCCGCTTCCTTCGGGAAACTCAT

Long Flanking Sequence:

AGTTATTAAATATAACTGAAATAAGTACTAAAATTACCTAAAATAATCAAAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATACACAAATATAAAGCTGATTTAAAAAAATCTAAATAAATAGTATTTCAATAATACCATTAAAAAAGAAGTTAGTTTAGGAATTCAACTCCTGATGATATCCACATTATGTTTCTATTTACTTTTCTCACTGAAATGTTGTGCTGGTGCAAATTTTTTATTCACATCTGGATTTGACATGCAAAGCTGAAATCACAAGTGCATTATGGGTGTTGAAGTCTTTAAACCCGTTTTATGTCTACCTCCAGGTGCAGTGGCTGATGGATAACTATGAGACGGCAGAAGGAGTAAGTCTTCCTCGCTGTACTCTATACTGTCATTACCTCCTGCACTG[C/A]CAGCAGACCAAACTGGAACCCGTGAACGCCGCTTCCTTCGGGAAACTCATCCGCTCTGTGTTCATGGGCCTCAGAACCAGACGTCTCGGCACCAGGTACAGCCACACTGTCCACCGCTACTGTGCTGCAGTACAGCTTCAATGCTGCGTTTTAATATATTCACTATAGTGGCTAGCTCCGCCCACACTCAAATCTCATTGGTTTAGAATTTTACATAAAAATGATCTCTTCACAGTTTACATACATGCACACACACATGCATATACATGTGGATCTACGATAAATCCTCACACAAAGAGATGCACAATCAAATGTGTGTGTGTGTGTGTGTGTGTGTGTTGTTTCAGAGGGAACTCCAAGTACCATTACTATGGCCTTCGGATCAAGAGCAACTCGCCCCTGCACAGACTGGTAGAGGACCAGCAGCACCTGGCCATGAGACAACAGCCATACTCACAGAAACAGAGGTGTGTGTGTGTGTGTGTGTGTTGATAATCACT

Associated Phenotype:

Not determined