ZMP

snphb

Ensembl ID:

ENSDARG00000075539

ZFIN ID:

ZDB-GENE-090313-92

Human Orthologue:

SNPH

Human Description:

syntaphilin [Source:HGNC Symbol;Acc:15931]

Mouse Orthologue:

Snph

Mouse Description:

syntaphilin Gene [Source:MGI Symbol;Acc:MGI:2139270]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa43931	Nonsense	Mutation detected in F1 DNA	Not yet available
sa3213	Nonsense	F2 line generated	Not yet available

Mutation Details

Allele Name:

sa43931

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109537	Nonsense	384	710	6	6
ENSDART00000143545	None	None	188	None	3

Genomic Location (Zv9):

Chromosome 23 (position 16811918)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	16714857
GRCz11	23	16641200

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACCTATGAAGGACTGTGCAGCAGTGAGCCGAGAGTTGTGCCACTCCGCTG[C/A]AGTAGTATCGGGGCGGGGGCCAGTGTTAGTTTAAGCCATCCCTGTCTGTC

Long Flanking Sequence:

CTGGGAGATACTGACACAGGGGTGCAGAAGGGCTTCCAAGATATAAACCTACAGAACCACAAACTGGAGTCTTTATTGCAAAGCATGGAGTTGGCTCAGATCGGCACTACCAAAACAGGAGAAGCCCTAGCAGGTGGAGGATTGGTGGGGGCAGGGCTGGAGGTCAGCGAGGGCCTGGCGGGGTCTTCCGAAGGCTCCCCAGCTCGCTCGCTTACCCGCAGCTCTACCTACACCAAGTTGAGTGATCAAGGTGGCCCGGAACGTGAGAGTAACGAAAACGGGTGTGACATTCCATGTTTGTCAGGCGAGGGCACGCAAGACAGCGGGTTTGTTTGCTGTGGAGAGAGTGGGAGAGGAGCCAGCAAGGCAGATTTGCTCCTGGAGGCTGCATTTCTGTCTCAAGAGACAGCCTCGCTGCTCAATGCGTACTCCCGCCTGCCGCATTCCTCCACCTATGAAGGACTGTGCAGCAGTGAGCCGAGAGTTGTGCCACTCCGCTG[C/A]AGTAGTATCGGGGCGGGGGCCAGTGTTAGTTTAAGCCATCCCTGTCTGTCACATCATCACTTATATCTTCACCACCTTCGTGAGCAAGGCATTCAAACTGAATATGACCATGCCCCAGCTTCTGCTCCTGCCCATGGTCCTAGTACATCATTTAACTCTGATCTAGACACTATTGCCGAGCGCACGTTCCGCTCTCAGGCCTGCAGTCCAACCTCCACATGGATGTCTGATGAAGGAGATGATCTGGAGTCAGCAGCCACAGAATCAGCTATTACAGCAACAGTTGCTACAACTTCTGTTGTTGCAGACTTTTCCACCAAGTCCGCACCAGTAGCAATGGGGAATTGGATGCCAACTGCATCTGATTCCAAAGGAGCTGCAACTTTTCCATTGATGCCTATTGATTCCCCTGACAAGGAGACTAGTTTTTCAGAGCCCCTTACAGACTTGCCAATCAGCACAACAGCTTTGACCACAGAGACCATTGGATCACCAGTAAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa3213

Status:

F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109537	Nonsense	590	710	6	6
ENSDART00000143545	None	None	188	None	3

Genomic Location (Zv9):

Chromosome 23 (position 16812534)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	23	16715473
GRCz11	23	16641816

KASP Assay ID:

554-2502.1 (used for ordering genotyping assays)

KASP Sequence:

CTATGCAGCCTTTGGTGGGGRCAGAGGAGGACTCCCTTCCTCARACCACT[C/T]AGCCTCAYAGTGTATTAACAGAGACTGTGGTTCCAGGGGATAATGTGATA

Long Flanking Sequence:

CAGCTTCTGCTCCTGCCCATGGTCCTAGTACATCATTTAACTCTGATCTAGACACTATTGCCGAGCGCACGTTCCGCTCTCAGGCCTGCAGTCCAACCTCCACATGGATGTCTGATGAAGGAGATGATCTGGAGTCAGCAGCCACAGAATCAGCTATTACAGCAACAGTTGCTACAACTTCTGTTGTTGCAGACTTTTCCACCAAGTCCGCACCAGTAGCAATGGGGAATTGGATGCCAACTGCATCTGATTCCAAAGGAGCTGCAACTTTTCCATTGATGCCTATTGATTCCCCTGACAAGGAGACTAGTTTTTCAGAGCCCCTTACAGACTTGCCAATCAGCACAACAGCTTTGACCACAGAGACCATTGGATCACCAGTAACCAACTCAACTGTTCAACCACAACCTATAACAGACCCTTTGCCAAACCCTGGCACATCCCCTTGCTCTATGCAGCCTTTGGTGGGGACAGAGGAGGACTCCCTTCCTCAGACCACT[C/T]AGCCTCACAGTGTATTAACAGAGACTGTGGTTCCAGGGGATAATGTGATAAATATAGGCGCAGATGATGAAGATGAGGGGGATGAAGGTGCAACGAACACAGATTCCAAATCATCTGGCTGTGGTTTACCAGTCAAGAACTACTGGAGTCGGCACTTCCTAGTGGATTTGCTTGCAGTGGTCGTGCCAGTGGTTCCCACCGTGGCATGGTTCTGTCGGGGTCCACATCGTGATGGTCAGCCAATTTACCATATTGGTTCTCTTTTGCGTGGTTGCTGCACCGTGGCCCTCCATTCACTTCGTCGAGGAGGTGGCCTTCGCCACTACCCTGCAGGAGGAGGTGGTCCAGGGGGAATGAATATATGAGACATTCTCTTTCTTGCAAAGCCCTAAAACCAGTGACATCACTGTTCCTCTGTCAGATGTGCTATTAGAGTCTGGGTAAAACATGCAAAATATTGTTTGAAGCAGGGATTGTGTCTGAGCACAGGCCCTTAAAGA

Associated Phenotype:

Not determined