Busch Lab

ZMP

ptpn20

Ensembl ID:
ENSDARG00000075459
ZFIN ID:
ZDB-GENE-090313-90
Description:
Novel protein similar to H.sapiens PTPN13, protein tyrosine phosphatase, non-receptor type 13 (APO-1
Human Orthologues:
PTPN20A, PTPN20B, PTPN20C
Human Descriptions:
protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422]
protein tyrosine phosphatase, non-receptor type 20B [Source:HGNC Symbol;Acc:23423]
protein tyrosine phosphatase, non-receptor type 20C [Source:HGNC Symbol;Acc:23424]
Mouse Orthologue:
Ptpn20
Mouse Description:
protein tyrosine phosphatase, non-receptor type 20 Gene [Source:MGI Symbol;Acc:MGI:1196295]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa42229 Nonsense Mutation detected in F1 DNA Not yet available
sa13082 Nonsense Available for shipment Available now
sa7227 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa42230 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa28137 Nonsense Mutation detected in F1 DNA Not yet available
sa16981 Essential Splice Site Available for shipment Available now
sa17567 Essential Splice Site Available for shipment Available now
sa17079 Essential Splice Site Available for shipment Available now
sa35525 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa42229
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Nonsense 664 1925 19 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31407531)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31053479
GRCz11 13 31183929
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAAACATTCTATGTGACTTCAGTGATTTGACTGTAATCATCCGAAGCTA[C/T]AAGAACACCTTTGTGCACCAAAAATTGTAAATACGACTTTATTTGCCATT
Long Flanking Sequence:
TCATCCAGGGCGTTATGGTGGCGTAGTGAGTAGAACAGTCACCTCACAGCAAGAAGGTTGCTGGTTCTAGTCTCGGCTGGGTCAGTTTGCATTTCTGTGTGGAGTTTGCATGTCTCCCCGTGTTGGCGTGGGTTTCCACAGGGTGTTCCGGTTTCCCCCACAAGTCCAAAGACATGTGGTATAGGTGAATTGGGTAAGCTAAATTGTCCGTAGTGTTTGTGTGTGCTTGAGTGTGTATGGATGTTTCTCAGTGATGGGTTGTAGCTGGAAGGGCATCTGCTGCGTAAAACATAAGCTGAATAAGTTGGCGGTTCATTCCGCTGTGGCAACCCCAGATTAATAAAGGGACTAAGCTGAAAAGAAAATCAATGAATGAATGAGCTCCCTCATCCTCCATGCACAGCAACTGTCCACAGATATTCAAAGTCCAAAAAAGCTATCAAAACATGGCTAAACATTCTATGTGACTTCAGTGATTTGACTGTAATCATCCGAAGCTA[C/T]AAGAACACCTTTGTGCACCAAAAATTGTAAATACGACTTTATTTGCCATTTTTTTCTCTTCCTCATCTGGTTGCCAAAGTGCGTCTTTACTAAGAGCATAACATACTGCCATTAGAGTCAGCAGCGAAACACATAAGCAATGTTTTGCTTAGAGTAAATGCTAAGCCTGATCTAATGTGGGAGACATAAGTGAACAAAGTCCTTTTTACCATTTTTGGCGCAAAATATTGTTCGGGGAGCTTTGCATGATTGCAGTCGAGCAACTGAAGTCAAATAGACTGTTTTGATATATTTATTTTTAGTTTCTTTTGTGGGCTTTGAACATCTCAGTTCTATAAAGTATGAGGGAACTCTCTGATTTTACATAAAATATCCTTATTTGTAATTTAATGTTGATCAAATGTCTCAGACGATTGAAACAACATTAGGGTGAGTAATTAATTACTAACAGAACTTTTCATTTTGGGTGAAACTAATCCTTTAAACCTAAAACAACTGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13082
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Nonsense 692 1925 20 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31408064)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31054012
GRCz11 13 31184462
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAACCTAAAACAACTSTCAGTCAATATCTTCATGCTTTTTTTCATGAGTW[G/T]AGGATCTTCGGGGCAGCAAGACTTCACTGGCTCCAAGTAATTTAGGAATG
Long Flanking Sequence:
ACGACTTTATTTGCCATTTTTTTCTCTTCCTCATCTGGTTGCCAAAGTGCGTCTTTACTAAGAGCATAACATACTGCCATTAGAGTCAGCAGCGAAACACATAAGCAATGTTTTGCTTAGAGTAAATGCTAAGCCTGATCTAATGTGGGAGACATAAGTGAACAAAGTCCTTTTTACCATTTTTGGCGCAAAATATTGTTCGGGGAGCTTTGCATGATTGCAGTCGAGCAACTGAAGTCAAATAGACTGTTTTGATATATTTATTTTTAGTTTCTTTTGTGGGCTTTGAACATCTCAGTTCTATAAAGTATGAGGGAACTCTCTGATTTTACATAAAATATCCTTATTTGTAATTTAATGTTGATCAAATGTCTCAGACGATTGAAACAACATTAGGGTGAGTAATTAATTACTAACAGAACTTTTCATTTTGGGTGAAACTAATCCTTTAAACCTAAAACAACTGTCAGTCAATATCTTCATGCTTTTTTTCATGAGTA[G/T]AGGATCTTCGGGGCAGCAAGACTTCACTGGCTCCAAGTAATTTAGGAATGATGCTAGAAAGAAGCTTTGGCTCCCAAAGCACACTGAGCGCCGAGTACAGACCTGTGATGGAGGAGCTGGAGGAGACCCTCTCCAACATCATGGCCCCTAAAATCAACAAACGGATGCACATACCTGTGGTCCGCATTCTGGATATTCAGGTGATTTATAGTAATGCAGTTAACTTCTGGAATGTATCAAAACTAATCACTTTTTTAATGTGAAGACCCTCTTGGCAAAGCTTTGTTAATTTTTTTTTATTCTTCATCCTTTCCAGGACGAGATGTCTAAAAGTTCTTCTGGCTTCAGTTTGAAACCAGGTGAAATAATCTACATGGAGCTCCGAAAGATCAACGGCAGTTTGGGAATCAGTGTTGCTGTGAGTTTTCACTCTGAATGGCATTCATGTGAGTTCTGAAATATTGAAACATGGAGAGTGATACCATTATTTTGATTTCTAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7227
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 765 1925 21 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31408328)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31054276
GRCz11 13 31184726
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATGCAGTTAACTTCTKKAATGTATCAAAACTAAYCACTTTTTTAATKTGA[A/G]GACCYTCTTGGCAAAGCTTTGTTAATTTTTTTTTATTCTTCATCCTTTCC
Long Flanking Sequence:
TTTTAGTTTCTTTTGTGGGCTTTGAACATCTCAGTTCTATAAAGTATGAGGGAACTCTCTGATTTTACATAAAATATCCTTATTTGTAATTTAATGTTGATCAAATGTCTCAGACGATTGAAACAACATTAGGGTGAGTAATTAATTACTAACAGAACTTTTCATTTTGGGTGAAACTAATCCTTTAAACCTAAAACAACTGTCAGTCAATATCTTCATGCTTTTTTTCATGAGTAGAGGATCTTCGGGGCAGCAAGACTTCACTGGCTCCAAGTAATTTAGGAATGATGCTAGAAAGAAGCTTTGGCTCCCAAAGCACACTGAGCGCCGAGTACAGACCTGTGATGGAGGAGCTGGAGGAGACCCTCTCCAACATCATGGCCCCTAAAATCAACAAACGGATGCACATACCTGTGGTCCGCATTCTGGATATTCAGGTGATTTATAGTAATGCAGTTAACTTCTGGAATGTATCAAAACTAATCACTTTTTTAATGTGA[A/G]GACCCTCTTGGCAAAGCTTTGTTAATTTTTTTTTATTCTTCATCCTTTCCAGGACGAGATGTCTAAAAGTTCTTCTGGCTTCAGTTTGAAACCAGGTGAAATAATCTACATGGAGCTCCGAAAGATCAACGGCAGTTTGGGAATCAGTGTTGCTGTGAGTTTTCACTCTGAATGGCATTCATGTGAGTTCTGAAATATTGAAACATGGAGAGTGATACCATTATTTTGATTTCTAGGGTGGGATCAACACTAATGTACATCATGGAGGAATCTACATCAAAAGTGTGATAGCAGGAGGAGCGGCAGATCAAGATGGAAGAATACAGATAGGTTAAGATCCATCATTATTTATAAGACAAAGATGCTCAGTGTTCTGAACTCAAACTAATCTGCTGGTCACACTTTTTTGGAATAATGTTACATTTTGTTTTTGTAAGTAAATCAACATTTTATTCTTGATTACCAAGGCTGTTTATTTGTTCCAAAATGCATGAAAAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42230
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 1030 1925 27 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 Essential Splice Site 82 286 2 4
Genomic Location (Zv9):
Chromosome 13 (position 31416983)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31062931
GRCz11 13 31193381
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAATCTGCAGACCTTCACAGGATGAGCATACAGATATTGAGACCTTTCTG[G/A]TAACATCCTCTTCCTTCATGTTTGCAAACAATTTTAAAATTTGACGTCTC
Long Flanking Sequence:
TAAAATATATATTGTAGTAACACAAATGAATAAAGTGATACATAACCACAGTAAACGTGTATTTTTAATGTTTTCTTTCTATTTTCTTTCGTTTAGACTTTCCAAAAACATTATAAGGACCAATTTTTCAGATTTTTAACTGCAATGTTTAGTCTTGAACAGCACAACTGGTTTTAACAGCACAACTGGTTTTAACATTGACAACAACATCCAATGAATCTTAAGCACATATTCAGCATATTAGAATGACTTATGAAGGAACACATGACACTTAAGGCTAATGTTTATAATCATAATGCTGTACTGTATAAATGCAGCCGAGCAATAAATGAGAGAATTCATTTTAAAACAATCTTACAACCCCAAATATCTTTACTATAATGTACAACTTTCTTTTCACACAGGAGGTTCTGCATCTCCTCCAAAAATCTCCATCTGAGATCAGACTGTCAATCTGCAGACCTTCACAGGATGAGCATACAGATATTGAGACCTTTCTG[G/A]TAACATCCTCTTCCTTCATGTTTGCAAACAATTTTAAAATTTGACGTCTCAAACTGACATCCCTTTTTGACAGGTTCCAAACCGTGAACTGAGATCCAGATCTCTCGACCTACAAGCGAGGTCTGTGGCTCCAGATTTCAGTGAGCTCCTCTTGAGGCGGGCGATAGAGATGGGGCTTAAAAAAGAAGCTTCACCTGAGGAAACCCAGGAGAGTGAGCTGCTGGAAACAGATAAATCAATTCCTCCACCTCTACCTCCACGTCCATCTTCTGCTGAAGGTGGAGAAAGAAAACCTCATGTCATTCTAGTGGAGGAGTATGAGAAGAAAGACCCGCCTCCTCCTCCGACTCCTCCTCCAACACCAGGCATTCTTAAAGCGTCAACAACCAACACTGTGCAAACCCCAGCAGCACCTAAAACTGCAATTAAAGCCCATCAGCAAGAGTCACTCGAACCAACTGTCTCTAGAAGCAACCATGTCTCAGCATGTACGAGGTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28137
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Nonsense 1161 1925 30 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31420319)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31066267
GRCz11 13 31196717
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGATGACGAAGAGGATGATGAAGATCCCAGAAGGGTGAAGCCTGATTG[T/A]ATTTCCTGTAGACATGTGGAATACTCTTTAATTAGAGATGCCTAATTTGT
Long Flanking Sequence:
TAAAGAGATTTCAGAAGCTGCATAGCTACTTTTTGTATGTGTAAATAGATAACCGACAAAATCCTGTTTCACCTTTTGCATGTGCTTTATAAGATTTTTTCTTTGCTTCATTCAAAAAATAGTCATGATCAATTATTCAAATACATTGGCACGGAAAAACATGACTTCACATTATCTCTTCACAGTCACGTGAAAGATGAAGGAGTGGAAGAGAACGTGATAAGTTTCACAGCTAATGGTCTGACCGTCACTGCTGGTGAAGAATACCTGACCATCAGCACTACGGCTCCATCTCCCCCGAGCGGCAGCACTGCAGTCTCCTCTGAAGCTCCTCCTCCTGTGCCTGCACTTTCTCCATCACTGCTGAACACACCTCCAACATACCAGCAGGCCATTCAAGCAGCATCTCCAGCAGAGCCTCCTGCCCAGCCCAGCAACAACGGCTGGGATGATGATGACGAAGAGGATGATGAAGATCCCAGAAGGGTGAAGCCTGATTG[T/A]ATTTCCTGTAGACATGTGGAATACTCTTTAATTAGAGATGCCTAATTTGTCTCTTAGTTTTTTTTTTTAATCTAACTTTGGAGCAAGTAGATTTTATAAGAGGTTGTTTAGAGAAAAAAAAATTTAAGTATAAAAAATAAAAATATTAACGAATAATTTAACAGGCATTAGGAGAAAATAAACAAATTCAATTGAAATAGTTGTAATTATAAAAAAAAAGAAAATTAAATAATATTCAAAGAAATTATCTAAATTGGTTTTATTAGATTAAAATTTATAATAGAATTTGAGTTAAATGAATAAATGTATAAAATTATGCTAAATGTAAAAAAAAATAAACAAATGTACACTCACTGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAACGTAAGTTTCTAATTAGCCAATCACATGGCAGCAACTCAACTCAATGCATTTAGGCATGTAGATATGGCACACATTCCTGGCACACTTTCAGCCCATTAGTACTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16981
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31420389)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31066337
GRCz11 13 31196787
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATAYTCTTTAATTAGAGATGCYTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGRTTTTATAAGAGGTTGTTTAGAGAAAAAAA
Long Flanking Sequence:
ACCTTTTGCATGTGCTTTATAAGATTTTTTCTTTGCTTCATTCAAAAAATAGTCATGATCAATTATTCAAATACATTGGCACGGAAAAACATGACTTCACATTATCTCTTCACAGTCACGTGAAAGATGAAGGAGTGGAAGAGAACGTGATAAGTTTCACAGCTAATGGTCTGACCGTCACTGCTGGTGAAGAATACCTGACCATCAGCACTACGGCTCCATCTCCCCCGAGCGGCAGCACTGCAGTCTCCTCTGAAGCTCCTCCTCCTGTGCCTGCACTTTCTCCATCACTGCTGAACACACCTCCAACATACCAGCAGGCCATTCAAGCAGCATCTCCAGCAGAGCCTCCTGCCCAGCCCAGCAACAACGGCTGGGATGATGATGACGAAGAGGATGATGAAGATCCCAGAAGGGTGAAGCCTGATTGTATTTCCTGTAGACATGTGGAATACTCTTTAATTAGAGATGCCTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGATTTTATAAGAGGTTGTTTAGAGAAAAAAAAATTTAAGTATAAAAAATAAAAATATTAACGAATAATTTAACAGGCATTAGGAGAAAATAAACAAATTCAATTGAAATAGTTGTAATTATAAAAAAAAAGAAAATTAAATAATATTCAAAGAAATTATCTAAATTGGTTTTATTAGATTAAAATTTATAATAGAATTTGAGTTAAATGAATAAATGTATAAAATTATGCTAAATGTAAAAAAAAATAAACAAATGTACACTCACTGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAACGTAAGTTTCTAATTAGCCAATCACATGGCAGCAACTCAACTCAATGCATTTAGGCATGTAGATATGGCACACATTCCTGGCACACTTTCAGCCCATTAGTACTAATTGGGCATCATGTAAATGCAACAGCCTACCTCAGGATTGTTGACGACCATGTCTATCTATGACCACAGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17567
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31420389)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31066337
GRCz11 13 31196787
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATAYTCTTTAATTAGAGATGCYTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGRTTTTATAAGAGGTTGTTTAGAGAAAAAAA
Long Flanking Sequence:
ACCTTTTGCATGTGCTTTATAAGATTTTTTCTTTGCTTCATTCAAAAAATAGTCATGATCAATTATTCAAATACATTGGCACGGAAAAACATGACTTCACATTATCTCTTCACAGTCACGTGAAAGATGAAGGAGTGGAAGAGAACGTGATAAGTTTCACAGCTAATGGTCTGACCGTCACTGCTGGTGAAGAATACCTGACCATCAGCACTACGGCTCCATCTCCCCCGAGCGGCAGCACTGCAGTCTCCTCTGAAGCTCCTCCTCCTGTGCCTGCACTTTCTCCATCACTGCTGAACACACCTCCAACATACCAGCAGGCCATTCAAGCAGCATCTCCAGCAGAGCCTCCTGCCCAGCCCAGCAACAACGGCTGGGATGATGATGACGAAGAGGATGATGAAGATCCCAGAAGGGTGAAGCCTGATTGTATTTCCTGTAGACATGTGGAATACTCTTTAATTAGAGATGCCTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGATTTTATAAGAGGTTGTTTAGAGAAAAAAAAATTTAAGTATAAAAAATAAAAATATTAACGAATAATTTAACAGGCATTAGGAGAAAATAAACAAATTCAATTGAAATAGTTGTAATTATAAAAAAAAAGAAAATTAAATAATATTCAAAGAAATTATCTAAATTGGTTTTATTAGATTAAAATTTATAATAGAATTTGAGTTAAATGAATAAATGTATAAAATTATGCTAAATGTAAAAAAAAATAAACAAATGTACACTCACTGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAACGTAAGTTTCTAATTAGCCAATCACATGGCAGCAACTCAACTCAATGCATTTAGGCATGTAGATATGGCACACATTCCTGGCACACTTTCAGCCCATTAGTACTAATTGGGCATCATGTAAATGCAACAGCCTACCTCAGGATTGTTGACGACCATGTCTATCTATGACCACAGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17079
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
ENSDART00000111705 Essential Splice Site 1167 1925 31 50
ENSDART00000132326 None None 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31420389)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31066337
GRCz11 13 31196787
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATAYTCTTTAATTAGAGATGCYTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGRTTTTATAAGAGGTTGTTTAGAGAAAAAAA
Long Flanking Sequence:
ACCTTTTGCATGTGCTTTATAAGATTTTTTCTTTGCTTCATTCAAAAAATAGTCATGATCAATTATTCAAATACATTGGCACGGAAAAACATGACTTCACATTATCTCTTCACAGTCACGTGAAAGATGAAGGAGTGGAAGAGAACGTGATAAGTTTCACAGCTAATGGTCTGACCGTCACTGCTGGTGAAGAATACCTGACCATCAGCACTACGGCTCCATCTCCCCCGAGCGGCAGCACTGCAGTCTCCTCTGAAGCTCCTCCTCCTGTGCCTGCACTTTCTCCATCACTGCTGAACACACCTCCAACATACCAGCAGGCCATTCAAGCAGCATCTCCAGCAGAGCCTCCTGCCCAGCCCAGCAACAACGGCTGGGATGATGATGACGAAGAGGATGATGAAGATCCCAGAAGGGTGAAGCCTGATTGTATTTCCTGTAGACATGTGGAATACTCTTTAATTAGAGATGCCTAATTTGTCTCTTAGTTTTTTTTTTTA[A/C]TCTAACTTTGGAGCAAGTAGATTTTATAAGAGGTTGTTTAGAGAAAAAAAAATTTAAGTATAAAAAATAAAAATATTAACGAATAATTTAACAGGCATTAGGAGAAAATAAACAAATTCAATTGAAATAGTTGTAATTATAAAAAAAAAGAAAATTAAATAATATTCAAAGAAATTATCTAAATTGGTTTTATTAGATTAAAATTTATAATAGAATTTGAGTTAAATGAATAAATGTATAAAATTATGCTAAATGTAAAAAAAAATAAACAAATGTACACTCACTGGCCACTTTATTAGGTACACCTGTCCAACTGCTCGTTAACGTAAGTTTCTAATTAGCCAATCACATGGCAGCAACTCAACTCAATGCATTTAGGCATGTAGATATGGCACACATTCCTGGCACACTTTCAGCCCATTAGTACTAATTGGGCATCATGTAAATGCAACAGCCTACCTCAGGATTGTTGACGACCATGTCTATCTATGACCACAGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35525
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111705 Essential Splice Site 1673 1925 None 50
ENSDART00000132326 Essential Splice Site 287 373 None 10
ENSDART00000133774 None None 205 None 4
ENSDART00000137664 None None 94 None 3
ENSDART00000144568 None None 128 None 3
ENSDART00000147085 None None 89 None 3
ENSDART00000147936 None None 286 None 4
Genomic Location (Zv9):
Chromosome 13 (position 31437143)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 31083091
GRCz11 13 31213541
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGGCCCTCGAGCAGCTAGAAAAGCAAGATCTGGTCAAAGAGTTTATGG[T/A]AAGTTCTGGTCAGCATCAGTATAATGTATATATAAAGCATATAGCACATT
Long Flanking Sequence:
AGAGATGTTCTCTCTCAGGTGTGGTTAATGACCTATGAGTGGTTACTGTTACTGTCACAACAGAGTTACGCTTGTCTTTCTGTTAGCTTAACCAGTCTCAACAAGTCATTTATGTAGCTCCCACAGCCATATTTCTCCTTTTTGAACAATTTTCTGTAAAATGTAGAAATAGTTGAACTGTATGTGATCTTTTTCTATTTAAATCAGCATGTCTGACAAAGTTACTGAAATTAAAAAGTTACTTACAAAGTCACTTAAATCACCCTTTCCACCATTCTAGCCACCCATCCATCTATATATGCAGTTAAGATCAATCATGTCATCTAAACTAAAACAATCTGCAATACATCCAGGTCGGCCAATCGTGTCAGAAGAGGAGCTTTCCAGTCTTGCAGTGATTTCTCCTCCTAAGAATGGGCAGTACACCGGCTCCAGGGTCAAAGCCCTCATCCAGGCCCTCGAGCAGCTAGAAAAGCAAGATCTGGTCAAAGAGTTTATGG[T/A]AAGTTCTGGTCAGCATCAGTATAATGTATATATAAAGCATATAGCACATTACTTAAAGCAATAGTTTACCCACAAATAACACATTTACTGACCCTCAATTGAGTGAATGAGTGAATTTTTGTTGTTGTTGTTGTTGAACATGATTGAAGGTATTTTGTTGAATGTTGATAACATGTAGCCATTCTACAGTGGTGGGAAATGGAACTTAATGGCTTCCAGTTTCCAACATTCATTAAAATGCATTCAAAAGAAAACTTAAATGTGTTTGAAACGAGTACATTATGACATAATTTTTAATTCTGTGTGAACTGGCCCTTTAAATATATTGAATGTTATGGTTTTATAGAAGCAGACACATCTATATATAGTTTTCAGAAATATTATTTTGGTTTATCGTTTTGAAGGTAACTTAATGTCTGACATTTAATGATACTATGGCTGTTTTTATAGGCTTTGGAGCATTTAAACCCTTCAGACAACTGCCTGGTTGGAAAAGCACC
Associated Phenotype:
Not determined