ZMP
THSD1
Ensembl ID:
Description:
thrombospondin, type I, domain containing 1 [Source:HGNC Symbol;Acc:17754]
Human Orthologue:
THSD1
Human Description:
thrombospondin, type I, domain containing 1 [Source:HGNC Symbol;Acc:17754]
Mouse Orthologue:
Thsd1
Mouse Description:
thrombospondin, type I, domain 1 Gene [Source:MGI Symbol;Acc:MGI:1929096]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34905 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2544 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa34905
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113696 | Nonsense | 162 | 863 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 25114757)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 24714109 |
| GRCz11 | 10 | 24683561 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAGGATTGGTGTGTACACTAATGACCATTTCCATCCATGTTCAAGCAGC[A/T]AAGCGTCAACTCTGTACCTTGATGTGAGCTACCTTGAACAAGTCCAGGTA
Long Flanking Sequence:
AGTAACCTGACAATGCAAGCTATTCATTGTTTTTTTGCTTCTCAAGATTTTTATTGGTTTTACTTTGTGTTTTCTTTCCCATAGCAATGGCTGGTATCCAGCTATGGCCATCGATGCACATTGCCTTGAGCAATGCCAGTGTGTTTGTGGATTACAGCACTGAAAACAACCTCACTGACCACCGACTGACAGTGGAATTGATTGACGTGGACAGGAATGTTACAGTACTTACCAGGATGCTTCCTTTCCACCAATCAGAAGGGTCAATGGAGTTCAACTGCTCCTGTTTTCTTTATGCTGGTAATTTCAGATTCAGACTGGAGCAGAAGCACGTCCTTGGCGTGTCTAACAGGAGTGCCATCTGGTGGTGGAGTCCGATTCTACATGTGCACTGGCCTAACTTTCACTTAGTTGTGGAAAGGGGAAGCAACAACCAGAGCTCCACTGACTTTAGGATTGGTGTGTACACTAATGACCATTTCCATCCATGTTCAAGCAGC[A/T]AAGCGTCAACTCTGTACCTTGATGTGAGCTACCTTGAACAAGTCCAGGTAAAAAGAACCACCTTTGAGAAGGTGCAGAATCAGATAAGACATAATATTAAAGTAGCCAGGTCTCAACATCTAGAAATGCCATGTGCATCCCCTCTGACAGAGCGTGGCTTCATCCAGATTTCCATAAAGTCCCCTCATACCCAACAAGACATAAAATCATCTGGTCCCCTTTACCTGTCCAGCATCTTTTCCTACAAGCTTGTTGTGGATAACAGTTACAAAAGAGGTTGTGAAGGAGCAGTTTCTGTCCGTCGAATTGCTCCTCCCTGTACAGTTGCAAATGGAAAGATTCTGCTTTACAAGGAACAAAGTAAAGACTCATCTTCTCCCTCTCACCTGGCATTCAACTTCCTCACACAAGGGGAGAATGAGACTGAATTTAACTGCTCCATCTTTGATGCTGGCAAGAATAAGTACTGCTTCAATTTCACTCTGGTCTACAGTCAGGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2544
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113696 | Nonsense | 839 | 863 | 4 | 4 |
Genomic Location (Zv9):
Chromosome 10 (position 25117622)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 24716974 |
| GRCz11 | 10 | 24686426 |
KASP Assay ID:
554-2441.1 (used for ordering genotyping assays)
KASP Sequence:
CTCTCTCTGCAGACTACAGCAACTCTCCATATAGTCTCACAGAGTCAGAA[C/T]AACGCATGATGGACATTTCTGGATACTTGGGTGAAGATGATGGCGTAGAG
Long Flanking Sequence:
CATCTCGGCCATACAGAGAAAGAAGCATGACCCAGGTGACCCCTCGGCAACTGCCTGAGGGCAGCTGTAGAAGCAGACCCTGGGAACATACGCTTCCTGAACTTGAGGTCTGGTCTTGTTCCAGTCCTAGGATGACTGAAAGCTCAGTGGACAACAGGAGAAGACCATGGGTTGACACACCCCCATCACAGTCAAATTCAAAAGATTCAGCTCCAGCGACACCAACAAAAGAGCCCTTGGTGGATCGTCATCACGGGGCCCGGAGCCCATCTTCTGCACTGGACCGTGCTGAAAGAGCAGAGCAGAACTGGAGCAAAAGAGGCCCCTCACCCATCCAGAGGAACATACTAGCAAGGAAGCTACGAGAGGCGAATTCCTCTACCGGCCAAAGGCAACGCAGTTCCACATTTTCTACCTCAGAGCAGCGTAGGGGACGCTGTCGCAGCCTTCCTCTCTCTGCAGACTACAGCAACTCTCCATATAGTCTCACAGAGTCAGAA[C/T]AACGCATGATGGACATTTCTGGATACTTGGGTGAAGATGATGGCGTAGAGGTTCTGACTATTCATAAGCTTACCTGACAAATCCTGTGTTTCTACTAGTTTCCAACACTTTGACTTTAAAATGAAAGTCTTAATGGAATGAAGCATTAGTTTTTGATTACAGAAAGGTGTTTCTATCAGATTTGGAAGATTTTGTATCATTATGTTTTCATGACTTCAAATGAACGATTCATTGTATTTCTATTTATGAAGGCTTGATTTGATTTAAAAAGCCAATTTGATCTCATGCAAACCACCATCATGAACATTATATAGTATATTTTGGACACATTTTGATTTGATTGTACACTGGAAAATGTGAATTCTCAGGTTTTTTTCCATAACAAACCAAAATATACATATATATACAAAGTTTTTTTTTCCTGAATGATTATTTTATACTACGAAACAGTGATACACAATATCAGTCAAGACTTTTCACATGTAAAAATGCTGTTTTAA
Associated Phenotype:
Not determined