ZMP

zgc:172282

Ensembl ID:

ENSDARG00000075231

ZFIN ID:

ZDB-GENE-080219-38

Description:

Leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein [Source:UniPro

Human Orthologues:

LRFN1, LRFN2, LRFN4, LRFN5

Human Descriptions:

leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:29290]
leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:21226]
leucine rich repeat and fibronectin type III domain containing 4 [Source:HGNC Symbol;Acc:28456]
leucine rich repeat and fibronectin type III domain containing 5 [Source:HGNC Symbol;Acc:20360]

Mouse Orthologues:

Lrfn1, Lrfn2, Lrfn4, Lrfn5

Mouse Descriptions:

leucine rich repeat and fibronectin type III domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:213
leucine rich repeat and fibronectin type III domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:191
leucine rich repeat and fibronectin type III domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:238
leucine rich repeat and fibronectin type III domain containing 5 Gene [Source:MGI Symbol;Acc:MGI:214

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa35814	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa35814

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000111384	Essential Splice Site	None	687	6	6

Genomic Location (Zv9):

Chromosome 15 (position 11472067)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	15	13158495
GRCz11	15	13107732

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCCTCTTTCTGCCAAGGGCTCTAATCCTGTCTCTTTCTCTTGTTTCCTCC[A/G]GATATTCATCACCCTTCATCCATCCAATCATGCAAACTGCACCAGTGAGA

Long Flanking Sequence:

GCAAACTGAAATGAAATGATTCAAGTAAATGTTTATAAATGAATCATTTTTTTATTTTTTTTAACTGTAAATAATGTCACTAAACAGATAGAGGACTATGCATAAGACATCGGTGACCATCAAATCAAAAACTAGTGTAACTTCATTTTTTTAATAAATAAGACTATAATAAGTTCATAAAAATAAAAATGTATTAAAAATTAATTAAAAACTGGAACTAAATAGTCTTGCTAAATTCAATTCAGTACAATTCACCTTATTTCTATAGCGCTTAAACAATGCAGTTTGTGTCAAAGCAGCTCCACATAGAAGACTATAGTAAATTGAAACAGTGTCAGTCCAGATAAATCCACACTACTAATTATGCCACAAACACTCTCAATAGTGGACCAGATCATTTTTCTAAATTGTGTATTAGCTGACATGCTGGATGACTAGGCAAAGAAGCTTCCCTCTTTCTGCCAAGGGCTCTAATCCTGTCTCTTTCTCTTGTTTCCTCC[A/G]GATATTCATCACCCTTCATCCATCCAATCATGCAAACTGCACCAGTGAGACGGAAACTCGGATGGGACAAAGTGAACAGCATGTCTGTGCTTTCTGCACTTTCATCAATCTGCCCTCCTCCTCTTCCTCATCCTCCGTCTCTTCTGGCTTTACAGTGTCAGTTGTGACCCATCCTGTCCAGAGAGAACTGAAACTCAAAGCAACAAAACTAATGGCAGCAACTGTCCCAGCGGGAGCACACGTATACCTGTTAATTTGAGTCTTTCGGTCACTTTTTATTTTGCCATTTTCTTTTGTAACTGTACATAAATCAATTTAAGATCTTATAGTTTTGTACATGTAATTTTTATGTTGTGTGACTTTTTTTAATAAAATAAAAGACTGGATAAACTCAGGTGTGTTTATTGTACCGCATGCCATTCCCTTTTGATTGATTGATTTAATTTTTTTTTTATTGAAATTATTTATCATGATAGTATTGACCTTATTTCAAAATGCGG

Associated Phenotype:

Not determined