Busch Lab

ZMP

LOC100331020

Ensembl ID:
ENSDARG00000075162
Human Orthologue:
CHDH
Human Description:
choline dehydrogenase [Source:HGNC Symbol;Acc:24288]
Mouse Orthologue:
Chdh
Mouse Description:
choline dehydrogenase Gene [Source:MGI Symbol;Acc:MGI:1860776]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa25412 Nonsense Mutation detected in F1 DNA Not yet available
sa21400 Nonsense Available for shipment Available now
sa41313 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa25412
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111007 Nonsense 116 585 2 8
Genomic Location (Zv9):
Chromosome 8 (position 55543703)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53504677
GRCz11 8 53486031
KASP Assay ID:
554-7680.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCTACCACACGTTACCTCAGGCCCACATGGATGACCGTGTGATGTACT[G/A]GCCCCGCGGGCGTGTCTGGGGCGGCTCATCCTCACTTAACGCCATGGTGT
Long Flanking Sequence:
TTCGTTTCTGTCAACTTTGTGTTTTTGACTGTTTGGCGCCATCTAGTGGCTGAATAATGCGCAGGTTAGTGTATACTCCATCAGCAGTTTTCGTTTCTGTCAGCTTTGTGTTTTTGACTGTTTGGCGCCATCTAGTGGCTGAATAATGCGCAGGTTAGTGTATACTCCATCAGCTGTTTTCGTTTCTGTCATTTTTTCGTTCAATTAAGGAATTTTAAAAACCATTAGGGCTTGGAACAATGTTTTGTGTTTGATGTTTTTGTGGTAAGTACCCTTGTAATATTCTGTATAAAGTACATCCAGTCAATTGATTTCTCGGAATAAACCCTTCAGTCCTATGTAACAGGGCTGCGCATCACATTGGGCTGCTGATAAACCTGTCAGGCTTTATTCTGAGATACCAACCTATCCATTACTTATCGAATACTGCTATATGTCCAGGTACAACTGGTTCTACCACACGTTACCTCAGGCCCACATGGATGACCGTGTGATGTACT[G/A]GCCCCGCGGGCGTGTCTGGGGCGGCTCATCCTCACTTAACGCCATGGTGTACATCCGGGGACACGCAGAGGACTACAACCGCTGGCAGAGTGAGGGTGCGGACGGCTGGAACTACGACCACTGCCTGCCGTACTTCCGTAAAGCACAGACACACGAGCTCGGACCTGACCGGTACCGCGGAGGAGACGGACCACTGCACGTGAGCCGAGGGAAAACACAAAACCCTCTGCACTATGCATTCATCCAGGCGGGACAGCAGGCTGGATACCCCTACACCGAGGACATGAACGGGTTCCAGCAGGAGGGGGTCGGCTGGATGGACATGACCATTCATAAAGGTACAGGTGGATAGTTGGGGGTGTTTACTTGATTTTATTTATTTATTTTCCTTCTTCTCTTTGGATGTTGCCAAGCCTTTCATTGTTAACATATAGACCAAACAAATATATAAGGTGCCATGTAGGATTTAAAACAAACTTATCATAACAAACATAAAACAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21400
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111007 Nonsense 209 585 2 8
Genomic Location (Zv9):
Chromosome 8 (position 55543981)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53504399
GRCz11 8 53485753
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCACTATGCATTCATCCAGGCGGGACAGCAGGCTGGATACCCCTACACC[G/T]AGGACATGAACGGGTTCCAGCAGGAGGGGGTCGGCTGGATGGACATGACC
Long Flanking Sequence:
AATATTCTGTATAAAGTACATCCAGTCAATTGATTTCTCGGAATAAACCCTTCAGTCCTATGTAACAGGGCTGCGCATCACATTGGGCTGCTGATAAACCTGTCAGGCTTTATTCTGAGATACCAACCTATCCATTACTTATCGAATACTGCTATATGTCCAGGTACAACTGGTTCTACCACACGTTACCTCAGGCCCACATGGATGACCGTGTGATGTACTGGCCCCGCGGGCGTGTCTGGGGCGGCTCATCCTCACTTAACGCCATGGTGTACATCCGGGGACACGCAGAGGACTACAACCGCTGGCAGAGTGAGGGTGCGGACGGCTGGAACTACGACCACTGCCTGCCGTACTTCCGTAAAGCACAGACACACGAGCTCGGACCTGACCGGTACCGCGGAGGAGACGGACCACTGCACGTGAGCCGAGGGAAAACACAAAACCCTCTGCACTATGCATTCATCCAGGCGGGACAGCAGGCTGGATACCCCTACACC[G/T]AGGACATGAACGGGTTCCAGCAGGAGGGGGTCGGCTGGATGGACATGACCATTCATAAAGGTACAGGTGGATAGTTGGGGGTGTTTACTTGATTTTATTTATTTATTTTCCTTCTTCTCTTTGGATGTTGCCAAGCCTTTCATTGTTAACATATAGACCAAACAAATATATAAGGTGCCATGTAGGATTTAAAACAAACTTATCATAACAAACATAAAACACATGCATATACCACTTTAAATTGCCTACATATACACTTGCTTATACATATAAACTTGATCCTTCCATATATACCTACAACCACAAACACACATACATATGAACTTGATCCTTGACTATATATAACCACAACAACACATGCACTTACATATAAACTCAATCCTTGCACATATACCCCCATACACTCGCTTATACATATAAACACAATCCTTGCCTATATACCCACATACTGTACACTCGCTTATACATATAAACTCAATCCTTGCATATATATCCACAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41313
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111007 Essential Splice Site 449 585 7 8
Genomic Location (Zv9):
Chromosome 8 (position 55550727)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 53497653
GRCz11 8 53479007
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAAGACCCCAGAGATCACCCCATCCTGCAGCCAAACTACCTGTCCACAG[G/A]TACACTCAGACTGCACTCCTGTCCAGTTATTTGTGGACTTCACTCGCTAA
Long Flanking Sequence:
CTGCCCTCGCAGGTCATCGATCACGGACGCGTCAGCTCCAAGATCGAAGCCTTCCAGGTCTGACTTATCATTCTGTTCAGCATGTTAGTGTGAAAGAAGACCAAAACCAAATCTGTAATCACAAGAAGCTCCAAAAACAGCCACTGCATCTGATCAGGGTGTGTGTTTACTACACTAAGCTAGTGTGTTGTGTGTGTTCGAAAGAGCTCCAGGATTTCATCTAAAATGTCTTCATGTGCATTCTGAGGGTAAACGAGCGATTATTGGGAGGATTTGCAGTCGTGGGTGAACGAACCCTTTAAATATGCACAGTTTAAAGGGCTGATGGAAACACTCCTGCGGTCTTGCCCTCGTGTCATGCTGCAGAGTGAATGAATGAGCTGGAGTTTGTGTGCAGGTTCATGTCGGGCCCATGAGGAGCACCAGTGTCGGCTGGCTCAAACTCAAGAGTAAAGACCCCAGAGATCACCCCATCCTGCAGCCAAACTACCTGTCCACAG[G/A]TACACTCAGACTGCACTCCTGTCCAGTTATTTGTGGACTTCACTCGCTAACTTCCCTCCGTCAGATGTACATTGATTATGTTACACAAGTGTGCACTACTGGCAGAACAGCTGAATGGGTTTAAATGAAATGCCCTAGCTACACTGTTGTGACAATCACATTGCATTCTGGGACTTGTTGGTGCTGGAGTGGACATATGAAGCTAACTTGATTCCTTGATTAAAATCAAGTGATCGAGGGTGTGTGCATGTAAACCGTCCTCATTGACTTGATGAAGTGGAGCACACTTTAAAATGGGAGAGGGAAGTTTGCGAGTGTGTGTCTAAAAGTGGACTGGAACACAGCCTTACTCTTCATGTTGAACCCTTACAAAAAACAAGTATACCTAAATTCATTTTATAAAGTATACTTAAGAAATGTTGCCGGCCACAGGTTTATATACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
Associated Phenotype:
Not determined