ZMP
nup98
Ensembl ID:
ZFIN ID:
Description:
Zgc:113968 protein [Source:UniProtKB/TrEMBL;Acc:Q0VFW5]
Human Orthologue:
NUP98
Human Description:
nucleoporin 98kDa [Source:HGNC Symbol;Acc:8068]
Mouse Orthologue:
Nup98
Mouse Description:
nucleoporin 98 Gene [Source:MGI Symbol;Acc:MGI:109404]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa29656 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa17239 | Essential Splice Site | Available for shipment | Available now |
sa37372 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa29656
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007981 | Nonsense | 287 | 359 | 8 | 9 |
ENSDART00000076867 | None | None | 451 | None | 10 |
ENSDART00000126383 | Nonsense | 287 | 358 | 8 | 10 |
ENSDART00000130950 | Nonsense | 287 | 1807 | 7 | 33 |
ENSDART00000136068 | Nonsense | 287 | 1803 | 8 | 33 |
The following transcripts of ENSDARG00000074955 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 21 (position 39226103)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 40366168 |
GRCz11 | 21 | 40389721 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGTACAACCACAGGAAGTTTGTTTGCCCAGCCACAGCAGCAGCAGCAA[C/T]AACAGCAGCAAAATTCCAGTCTCTTCAAACCATTCGGCTCAGCCACCACC
Long Flanking Sequence:
AATTCTTGTGCGGCCCGGTACTGATTGATCCACGTACCGGTCCGGGGGCTGGGAACCACTGATTTAGAGGATTATGTATTGATCTTGTCAGATGCTTTGTTGCTTTTGTACCAACCTTGTTGACTAGATTTTGAAGCAAAGACGAAATATCTTGTTGTCTTTCCTTTAAGGAATTGAGGCTTGAGGATTACCAAGCAGGAAGGAAGGGTCCTTCCAACCTCCCCATGGCAGCTGGCACAGGTGGCCTCTTTGGAGCAGCAGCCCCAGCTACTCCTAGTACTGGCACTGGACTTTTTGGCTCCTCTGCTCCAAACACTGGCTTTAACTTCGGCCAAAACAAAACCACATTTGGCACCAGTAAGTGGTTGTACCTTTTAGAATAGCTTATTTTAATAATTTTTTTCTCTTATTTACGCATGTTAACTTTTACCGCTGCAGGTACAGGCGCCTTTGGTACAACCACAGGAAGTTTGTTTGCCCAGCCACAGCAGCAGCAGCAA[C/T]AACAGCAGCAAAATTCCAGTCTCTTCAAACCATTCGGCTCAGCCACCACCACCCAAAACAATACTTTCTCCTTTGGCAACACCAGCAGCATGGTAAGTTCCAGTTGGTGCACTAAAGCCACGTTCACATTACCAGTGACATGCAGTGACAGAACACCAGGCAACCATTTATTTCAATGGAGAGTTAGCAACTTCTGGACAAGTGACCCAACAAAATTAAGAATCTTTCAACTTAATGCAAAAAAAAGCGATTGTAGCGCGTCAGTAGGGCTCACACGATTTTCTTTCAGGATGCTGTAGTCCTACACAGACCAGCGTTTTCCACAGATTATTATTTTTGTAATTAGAGTTCTATATTTTATTTATATCTAGTGTTTTCCCTCCACAGTGTTTTTCAGTGACGGGAAACTCACCCATTACCGTTTATATATAGTTTTAAACATTATTTAACAGGGATGTGATTCTTCCGTAAAAATACAGATTTCTGTATTTTCTGAGCCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17239
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007981 | None | None | 359 | None | 9 |
ENSDART00000076867 | None | None | 451 | None | 10 |
ENSDART00000126383 | None | None | 358 | None | 10 |
ENSDART00000130950 | Essential Splice Site | 1399 | 1807 | 26 | 33 |
ENSDART00000136068 | Essential Splice Site | 1395 | 1803 | 27 | 33 |
The following transcripts of ENSDARG00000074955 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 21 (position 39204975)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 40345040 |
GRCz11 | 21 | 40368593 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTTGACTATTGTTATGCATTTTTTTGTWTATAYTTTTGTTTTTAATGA[A/C]GGTGTGGCAGTCTACAGACTGTTGTATAAACGTGTGCTCAGAGCTGGACT
Long Flanking Sequence:
ACTGGCTGTCTGATTGCGCGGCCAACTGCATCGAGGAGGAGGTGGGCCGAGCGCTTCAGCGCAGCCATGCAGAGGCCGTATTCAGTTACCTCACTGGCCACTGCATCAGCAAGGCCTGCAAATTGTCCCAGAAGAGTGGTGAGTGCACACTTTATTCGTTTCCAGTGATGCCTAATGCGTAGTAGTGATTAGTACAACAGTTTGTAATAAAGGTTGTTTGTGTTTCTGTGTGTGTATAGGGGACCATCGGCTTTCTCTGATGCTGTCCCAGGCTGTGGGCTCTCAGTTTTGTCGTGATCTGTTGGCTCTGCAGCTCACAGACTGGAACAGGATGCAGACAGACTCCTTCATCGAGGAGGAGAGGCTACGAATATTTGCTTTGCTTGCAGGCAAACCAGTAAGTACATCAAATACCAGATGATGTAGATGTATGTTTTAGATGTAATGTGTTTGTTGACTATTGTTATGCATTTTTTTGTATATATTTTTGTTTTTAATGA[A/C]GGTGTGGCAGTCTACAGACTGTTGTATAAACGTGTGCTCAGAGCTGGACTGGAAGCGGTGTGTTGCTGTTCATCTGTGGTACATGCTGCCTCCCACTGCCTCTGTAGCTGATGCTCTCACCAAATACGAAACAGCGTTTCAGGTGAGTTTCTGTTATAGCAGGTTTGAACTTTTTAGGTATTTAATTACATCACTGATGTGGGTGAAATGCATCACATATTTACTTTTGCAAATCAAAAGCCAGAACAAATGCATCAACAATGTCGGAAAACTTTACAGACTTTACATAAGTCTGCCAGCTAAATGTGACCCAATTCCGATTTTTTTTTGCTTGTATGTGACACAGATTGGATCTGTTCTATGACCGTGTAAACACGAAAAAAAACGCATGCATTCGGATATTCAGAGATCGGTTTCAGGCCTCCTTCATTCATTCATTTTCTTGTCGGCTTACTCCCTTTATTAATCCGGGGTCGCCACAGCGGAATGAACCGCCAACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37372
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000007981 | None | None | 359 | None | 9 |
ENSDART00000076867 | None | None | 451 | None | 10 |
ENSDART00000126383 | None | None | 358 | None | 10 |
ENSDART00000130950 | Nonsense | 1476 | 1807 | 27 | 33 |
ENSDART00000136068 | Nonsense | 1472 | 1803 | 28 | 33 |
The following transcripts of ENSDARG00000074955 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 21 (position 39201749)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 21 | 40341814 |
GRCz11 | 21 | 40365367 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCGTATATAGACGAACTGGAGTTGTTGGGTTTGGATGAAGACATGGAT[G/T]AGATCGATTCCAAAAAGCCACTCTACGACATCTGCTTCCACCTGCTCAAA
Long Flanking Sequence:
TATTTATGCATTTTTTTATTCAGTGTTTTTAAAAAATACATTTAAAAGTTTAAAATAATAGATTTCAGATGGAATGATTAGGCTTTTTTAACTTTTAAAATTCATTTTTGTTGTTGATAAATGGAATGTTTTCCTAAATAAAATAATTAGTTTCTTTCAGTCACTGAAATTAAGGGCTTTTAGAGACTAAAAGAGGAAAAAAATATCAAATTGGATTATTGTTTTTGAAGAAATTGGTCTACTTGTAATAGAATTATGTACCATTACAGCATGCCAGAGCAGATTAAATGCGCCAAAGCTCATTTTCAGAACTTTCTTGAGAGATTCTTCTGATTTTTATCAAATGTGTAATTATCTTGAAAATAAATTATAAATACATAAATGCCATATTAACTGAACTTTTTTTCTAGGGTTCAGAGGAAGTGAAAAGGTATGCTGGCCCTCCTTTACCTCCGTATATAGACGAACTGGAGTTGTTGGGTTTGGATGAAGACATGGAT[G/T]AGATCGATTCCAAAAAGCCACTCTACGACATCTGCTTCCACCTGCTCAAACTTTACAGCGACAGGTTTGTAACTGTTGATTCCTTTTTTTGTTCACCATATGTTTGCATCAACATGACTGTAATTACATGACTGTAATTGTGTCCTCTTGACCCTGTTCCCCTCAGGCACTACAGCCTTCAACAGCTGCTTGATCCCAGCACAGTGACCGCCGATCATCTGGACTATCGGCTGAGCTGGCACCTCTGGAGTGTGCTGCAGGCTCTCAACTACAACCACCTGGCCACCTCATGCCAGGGCCTGCTGCATGCCAGCTATGCTGCTCAGCTAGAGAGTGCGGGATTATGGGAAATGGCCATCTTTGTGTTGCTGCACATCACAGACTCTGGGTAAGTGTGTTCTTATCAGAGTACTCAGTTAGTTGGGTTTTATATCATGGTGTATTATGTAAATTTATATGTGGGGTTGGGGTTTTTTTTGTGACCGTTTTTGCAGACGTAG
Associated Phenotype:
Not determined