Busch Lab

ZMP

si:ch73-184c24.1

Ensembl ID:
ENSDARG00000074827
ZFIN ID:
ZDB-GENE-100922-80
Human Orthologue:
C1orf116
Human Description:
chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:28667]
Mouse Orthologue:
AA986860
Mouse Description:
expressed sequence AA986860 Gene [Source:MGI Symbol;Acc:MGI:2138143]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa37784 Nonsense Mutation detected in F1 DNA Not yet available
sa44047 Nonsense Mutation detected in F1 DNA Not yet available
sa44046 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa37784
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109982 Nonsense 60 464 2 7
ENSDART00000146808 Nonsense 65 130 3 4
Genomic Location (Zv9):
Chromosome 23 (position 41901314)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 41735439
GRCz11 23 41630864
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCTGCTTGATGTTTCTGGAGGAGACCATTGAGTCTTTGGAGGCAGAATA[T/A]GACAGCGGTTTGTCAAACGATGAGCCTGATTGTCCATCCAATGGCCTGAA
Long Flanking Sequence:
GACGTGAATCCACATCTATTGTGTAGTGAATTTGAGACATAAATTAAGCAAGTAAACTCAAAATGTCCATGCATCTATTTACGCATGTATAACGCAATTTATTCGTGCATGCCGCATCTGGTGTGAACACAGCATTAGATCAGTCTTCAGTGTCACATGAAATAAGTCTAAAACTGTCAATTTTATGCTAAAGAAATATTTCTTATTAACAGTTGTAATATTGAAAGATATTGTTAAGCACAAATCAAAATTTATTTTTCAAGATTTTTTTTATTAAAAGTGCAAAAGCAGAGCATTTTTTTAACATTTAATTTTAGTTTCAGTTTAAATGTATTCAATATAATGTTTGTTAAACATATATAATTGAATGTGTCCTGGTTTAAAAAAAGTATTGATTTCTTTATGCGATAGAGTGATGGCAGTCTGGAGCACCTTTCCGCGGAGGAGAAAGCCTGCTTGATGTTTCTGGAGGAGACCATTGAGTCTTTGGAGGCAGAATA[T/A]GACAGCGGTTTGTCAAACGATGAGCCTGATTGTCCATCCAATGGCCTGAAAGAAAACATTGCTCATCCGACCTCCATCAGTCAGAACAAATCTCAGGGTAAACACCAACACCAGAAACATCTACGGCAGTGGTTTTCAACCTGCGTGCCCCCATCTGTTATCAATAACATTGTTAATATATGTAAAAATAGCCTTGTTTCCATCCAAAGATTCAAATTAAACGTGTGCAAAACTAAAATCATTGCCATCCAATGAGTCAACGAGAACAAAACCATACCTTTCTGATAAACTGGCTCTAAATATCAGAGGTTTGGCTGTAGGAGAAGCCACTGTGGGCTTTTTCTTCTATAATAAATAAGTTGCACCTTAGAAGATGAAATGCAATGAATACTCGGTGGCTTTTAGAGGCATGAGACACTCTTTGAGATCACAGATGCTCAAGATAGTTCTGAAGAAATAATAATATAATAACAATAATACTGAACTTACTACCTTGTAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44047
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109982 None None 464 None 7
ENSDART00000146808 Nonsense 95 130 3 4
Genomic Location (Zv9):
Chromosome 23 (position 41901226)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 41735351
GRCz11 23 41630776
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAATGGCCTGAAAGAAAACATTGCTCATCCGACCTCCATCAGTCAGAAC[A/T]AATCTCAGGGTAAACACCAACACCAGAAACATCTACGGCAGTGGTTTTCA
Long Flanking Sequence:
ATAACGCAATTTATTCGTGCATGCCGCATCTGGTGTGAACACAGCATTAGATCAGTCTTCAGTGTCACATGAAATAAGTCTAAAACTGTCAATTTTATGCTAAAGAAATATTTCTTATTAACAGTTGTAATATTGAAAGATATTGTTAAGCACAAATCAAAATTTATTTTTCAAGATTTTTTTTATTAAAAGTGCAAAAGCAGAGCATTTTTTTAACATTTAATTTTAGTTTCAGTTTAAATGTATTCAATATAATGTTTGTTAAACATATATAATTGAATGTGTCCTGGTTTAAAAAAAGTATTGATTTCTTTATGCGATAGAGTGATGGCAGTCTGGAGCACCTTTCCGCGGAGGAGAAAGCCTGCTTGATGTTTCTGGAGGAGACCATTGAGTCTTTGGAGGCAGAATATGACAGCGGTTTGTCAAACGATGAGCCTGATTGTCCATCCAATGGCCTGAAAGAAAACATTGCTCATCCGACCTCCATCAGTCAGAAC[A/T]AATCTCAGGGTAAACACCAACACCAGAAACATCTACGGCAGTGGTTTTCAACCTGCGTGCCCCCATCTGTTATCAATAACATTGTTAATATATGTAAAAATAGCCTTGTTTCCATCCAAAGATTCAAATTAAACGTGTGCAAAACTAAAATCATTGCCATCCAATGAGTCAACGAGAACAAAACCATACCTTTCTGATAAACTGGCTCTAAATATCAGAGGTTTGGCTGTAGGAGAAGCCACTGTGGGCTTTTTCTTCTATAATAAATAAGTTGCACCTTAGAAGATGAAATGCAATGAATACTCGGTGGCTTTTAGAGGCATGAGACACTCTTTGAGATCACAGATGCTCAAGATAGTTCTGAAGAAATAATAATATAATAACAATAATACTGAACTTACTACCTTGTAGTTTATGTGTTTTTAATATTATCGGATAAAAAGGTTAACCAACTCATTTGTGTGCATAAGGTTTTTATGCAAGACTTTAAAACTCATGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44046
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109982 Essential Splice Site 99 464 None 7
ENSDART00000146808 Essential Splice Site 98 130 None 4
Genomic Location (Zv9):
Chromosome 23 (position 41900052)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 41734177
GRCz11 23 41629602
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGAGATAGCTTGGGATGTTTCAATAATAGCCTATAAATGTTCTCTTTC[A/T]GAGTTCTCTACCCTCGAAGGTCAAGTCAAAGTGATTGGAAAAGATGGTAA
Long Flanking Sequence:
GATAAAAACCCACCGAAAAAGTTGATCAAAAATAGTGAGTTCATTCAAGAGTTCACACTTGGATATTGCTTGACGCTATTAGCAGGTTTGGCATGCTGTCCTGAGAGAGAACCCTGACCTCAGAGATAATTGAGCACAGGAATCCAGTGCATGTAAGGGGGTCCAAGATCAGGTAGATCTTGAGAGCTTCCCCTAGTAAAGAAAGAAAAGGAGGAGATGGGGTGGAAGGGGGGATTCTTACAAAACGAAGATAGGGCATTAGGGTGAAATCTGTCTATTTATTGTAGGCTTGGATCAATCTGATTAGTGTATTACTGATTATGGATGAGAGACAAGCCGCATTCAATCATATCATGTGCTCCTCTCGAATTTAGTTTAAAAACTTCCCTTAGTGGGATGTGAATTCAAAAAGATTGGCAACCACTGATCTACAGATGTACTGAAATACATAGAGAGATAGCTTGGGATGTTTCAATAATAGCCTATAAATGTTCTCTTTC[A/T]GAGTTCTCTACCCTCGAAGGTCAAGTCAAAGTGATTGGAAAAGATGGTAAACCTCCTCAGAAGTACCTTGTGCCAACCCCATTGCTCCTTGCCAGTGGAAATGACAAGATAATCAAACCTGTGGTAAAGGCTCCAGTAGAAGCACCTGTGGTAAAGGCTCCAGTAGAAGCACCTGTGGTAAAGGCTCCAGTAGAAGCACCTGTGGGATTTATTGATGCACCTGATGGGTTCAGATCAAGCCCCGACCATCAACAACATGGACGGATAGTTTCAGAAGATGCTCCTTCAAAAGTAGTACCAAGCGTTGGACTGTTAAGTGATGTGGTGGACTTGCCACCTTCTTTCATACCTGAGCCTCCAGTTAAAACAGGTTTGTGTAATGAAACCAAAGCCAAAGTTGGTGCTTCAGAGAGTTTAAATGTCAAATCCCAGGTAAAGGTGCAAAAGGTGTCCTCAGAGGTGCCACTGGAATTCATTCCTCCACCTTCAGATTTCATGGA
Associated Phenotype:
Not determined