ZMP
si:dkey-11f4.7
Ensembl ID:
ZFIN ID:
Human Orthologues:
AP005117.2, FAM38B
Human Descriptions:
Transmembrane protein C18orf30 [Source:UniProtKB/Swiss-Prot;Acc:Q8N787]
family with sequence similarity 38, member B [Source:HGNC Symbol;Acc:26270]
family with sequence similarity 38, member B [Source:HGNC Symbol;Acc:26270]
Mouse Orthologue:
Fam38b
Mouse Description:
family with sequence similarity 38, member B Gene [Source:MGI Symbol;Acc:MGI:1918781]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa41324 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6107 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa18490 | Essential Splice Site | Available for shipment | Available now |
| sa18491 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa41324
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109758 | None | None | 324 | None | 6 |
| ENSDART00000111349 | Nonsense | 118 | 1532 | 3 | 37 |
| ENSDART00000131483 | None | None | 287 | None | 5 |
| ENSDART00000133933 | None | None | 156 | None | 3 |
| ENSDART00000134867 | None | None | 147 | None | 3 |
| ENSDART00000142679 | Nonsense | 181 | 306 | 4 | 5 |
| ENSDART00000148338 | None | None | 177 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 96334)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 388176 |
| GRCz11 | 9 | 387809 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATGTGTCCCCCGTCAGATGACTGTCTGCTGCTGCTGGTGGCGTCGCTG[C/T]AGTGGAAGGTGTTCGAGGAGGAAAATCAGGCCTGTGTGAGACTCCTCGCT
Long Flanking Sequence:
ACCACCGGCCCTCTGCAGCGGTCAGCTACTCTACATTTATTCATGAATCACAGTCATTTAAAGTGTGCTTTCTGTTTATACACTGTGAGAATGTCTGCCAATTTTATGACTATATATATTTCACATGACAAAAGTGTGATGCTCACGGACGGTATATCATTTCCTCCTAATATTTAGCCGTGCCTCAGTATACGCAGATGTTCCTTCTGTGGCACCTTTAATAAAGCAGAAGATCTGAAAGCATGAGTCCTGATCATGAGTCCGCCCTCTTCTAGATTATCCCTGGAGGAGTTCCTCTCCGGCTTTGAGTTCTAACCTGATAAAGTGGCTGTATCTCCCAGACCACGCCATGAGTCCCAACGCCACCTTCATCCTCTGTGATTTTCTCCATCACACCACAGTAAATCAGCATATCCTCTAAGAGAGAAGCCTGCACGGTTCTCATGTTCTGCATGTGTCCCCCGTCAGATGACTGTCTGCTGCTGCTGGTGGCGTCGCTG[C/T]AGTGGAAGGTGTTCGAGGAGGAAAATCAGGCCTGTGTGAGACTCCTCGCTGGAGAAAACGTGGAGATCAGCCGGAATCTGGATCCACAGACACTCAATCAGTACACTCCTGTCAACAACTTCCTTCACTGCCGGTATCGGATGGGTTTCTATTAGCACACATCTTCCACAACATGCATTCAGAGTTGCTTTATTGTACCGGGTAGACTGATGGGGTATGGCATGACGTGTGTTTGTGTGTGTCGTCAGGTCATATCTGGACATGGTGAAGGTGTTTGTGTTCAGTTATTTTTTCTGGCTGGTGTTGTGCCTCATCTTCATCACGGGAACCACCAGGATTAACATGCTGTGTCTGGGTTATCTGGTGGCCTGCTTCTACTTCATGCTGTTCGGAGGCACATTACTGCTGCAGCCGGTGCAGTATGTGCTGAGACTGTGGGACGCTCTGATAGCATACACCTGCGTGGTCATCAGCCTCAAAAACTTGCTGTCGGTAAAACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6107
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109758 | None | None | 324 | None | 6 |
| ENSDART00000111349 | Nonsense | 199 | 1532 | 4 | 37 |
| ENSDART00000131483 | None | None | 287 | None | 5 |
| ENSDART00000133933 | None | None | 156 | None | 3 |
| ENSDART00000134867 | None | None | 147 | None | 3 |
| ENSDART00000142679 | Nonsense | 262 | 306 | 5 | 5 |
| ENSDART00000148338 | None | None | 177 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 96694)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 387816 |
| GRCz11 | 9 | 387449 |
KASP Assay ID:
554-3755.1 (used for ordering genotyping assays)
KASP Sequence:
CTCATCTTCATCACGGGAACCACCAGGATTAACATGCTGTGTCTGGGTTA[T/A]CTGGTGGCCTGCTTCTACTTCATGCTGTTCGGAGGCACATTACTGCTGCA
Long Flanking Sequence:
CGCCACCTTCATCCTCTGTGATTTTCTCCATCACACCACAGTAAATCAGCATATCCTCTAAGAGAGAAGCCTGCACGGTTCTCATGTTCTGCATGTGTCCCCCGTCAGATGACTGTCTGCTGCTGCTGGTGGCGTCGCTGCAGTGGAAGGTGTTCGAGGAGGAAAATCAGGCCTGTGTGAGACTCCTCGCTGGAGAAAACGTGGAGATCAGCCGGAATCTGGATCCACAGACACTCAATCAGTACACTCCTGTCAACAACTTCCTTCACTGCCGGTATCGGATGGGTTTCTATTAGCACACATCTTCCACAACATGCATTCAGAGTTGCTTTATTGTACCGGGTAGACTGATGGGGTATGGCATGACGTGTGTTTGTGTGTGTCGTCAGGTCATATCTGGACATGGTGAAGGTGTTTGTGTTCAGTTATTTTTTCTGGCTGGTGTTGTGCCTCATCTTCATCACGGGAACCACCAGGATTAACATGCTGTGTCTGGGTTA[T/A]CTGGTGGCCTGCTTCTACTTCATGCTGTTCGGAGGCACATTACTGCTGCAGCCGGTGCAGTATGTGCTGAGACTGTGGGACGCTCTGATAGCATACACCTGCGTGGTCATCAGCCTCAAAAACTTGCTGTCGGTAAAACACTTCTATGATGGTTTAATTGGTTTTCAGATTGATGTTAGACTGCCTGAGCTGTATAGTTGCTTTCCCAGGCTGGAGTGTGTTTCCTAAACAACATCGACAAAACTCGCGGCTGAACTATCATGGCATGATGCATGATTTGGGAAAAGAGCGATGTAGTGACGAGTGTTCCCCAACATCGTAGTTTCTCTGTTGCAGATCCATCGCTTGAACCACGTTAGTTATAATGTAAAACACCCATAATGATGCCCTAAACAGGGTGGAGGAACTACTTCTTTAGAGAAGAAGCCTCGTCATTTATTTGTGCAGATTATATTGTTTTACACACACACGCATTTAAAAACAATCCAATATTAGTAACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18490
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109758 | None | None | 324 | None | 6 |
| ENSDART00000111349 | Essential Splice Site | 1166 | 1532 | 30 | 37 |
| ENSDART00000131483 | Essential Splice Site | 224 | 287 | 4 | 5 |
| ENSDART00000133933 | None | None | 156 | None | 3 |
| ENSDART00000134867 | None | None | 147 | None | 3 |
| ENSDART00000142679 | None | None | 306 | None | 5 |
| ENSDART00000148338 | None | None | 177 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 117674)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 366836 |
| GRCz11 | 9 | 366469 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATYTACGCCAACATCTTCATCCTCAAGTGCTGGAGAGAAGCAGAAAAG[G/A]TSCAACTTGACTGTMGGGSTGTGAACAWACACTCAGGATRTCTTAAAATG
Long Flanking Sequence:
ATTTAAAAAGTAGGCAGCACATTTTGATGACACGATATGCTACCCATTAGATTTGGCCACCTGTGTAAATGTTAATGTGGAGTAGTGTGATATGAAGCTGTAATATCTCCCTAAACTACCTAATGCCTAACCCCAGCCACAGAACCATTTAAACACAGTGTTGTAGCATCATCTGATGGTAGGATAAAATGTCAGGACACCGGCAGATGTAAGGTGTAGAGTGCCTCTAGTGTGTCTGGTGGACACTCAACTTGGTCTTCTAAAAGTAATAATCTGGAATGGCTGAATTCATCTGTGGGATGTGCTTGTATAGTCGTCCTCTTAGTCCGCTTGTCCACATTTTTTCCTGCAGGTTCCGATTGGTTCCGTTCCTAACAGAGTTGCGGGCCGTAATGGACTGGGTGTGGACGGACACCACTCTCAGCCTGTCCAACTGGATCTGTGTGGAGGACATCTACGCCAACATCTTCATCCTCAAGTGCTGGAGAGAAGCAGAAAAG[G/A]TCCAACTTGACTGTAGGGCTGTGAACATACACTCAGGATGTCTTAAAATGTCTTAAATTGACTGTAATATGGTCTTGTAGATCTTAAGTCATTGTAAACTGGTCTACATTTTTCTATGTCCATGTAAAGCTACCCATTCTGGGCAACACTCATCCAATCACCACCAACACATGATATCTTCCTTATTGAACAATGTAACATCAACAACCAGTCACTACGAACCTGCAGCACTCTGGAAATAAAATGGCTTTCACAAAATACGAATTATTTTATCGTAAAAGTGCAACGGCAGTCTTTTCATTTAATATAATATGAATTAATTTGCAAAACGTAATATTGGAGTGGAGTAAAATACAGACAGCAGATGATCACAAACAAATACTGTCATTAGATTTAATTCCTAATAAAATCCCATGATCAGCAAAAAAAAAAAAAAATGCTTCTGTTTATTTTGTAAATTCCAGCTATTGAGTTAAATAGCTGAAAGTAAAAGAGTGTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18491
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109758 | None | None | 324 | None | 6 |
| ENSDART00000111349 | Nonsense | 1412 | 1532 | 36 | 37 |
| ENSDART00000131483 | None | None | 287 | None | 5 |
| ENSDART00000133933 | None | None | 156 | None | 3 |
| ENSDART00000134867 | None | None | 147 | None | 3 |
| ENSDART00000142679 | None | None | 306 | None | 5 |
| ENSDART00000148338 | Nonsense | 56 | 177 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 123308)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 361202 |
| GRCz11 | 9 | 360835 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGTCTCCAGCAGGGGAACCGCAGCTCCCCAGACAGCGCYCCGCAGTGGT[G/A]GGTGGTGCAGGAGTGCWGGCCCGGACCTCCACCCAGCAGCTGCCGCAGTA
Long Flanking Sequence:
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAATAATACAATCTGCACAAATAAATGATGGGGTTCTGCTCTACAGAAGTAATTCCTCCTCCCCGTTCAGAGCATCATTCTGGGTGTTTTACGTTATAACTAACGTGGTTTAAATGATGGATCTGCCACAGAGAAACTACAGGTTTTGGGAAACACTCGTCACTACATGGCTCTTTTCCCAAACCATGCATCAAACGATAGTTCAGCCGCGAGTCACGTTGTTGTTTGGGAAACACACCTCTGATTACTACACTGACTAATGAATCTGTGTGCTGATTGAGATGCTGTATCTGTGAGTCCTCCAGAGTTCTCCAGAGAGCCGGAGAATGCGGATCTGCAGTTCTTGCGTCCTCTGTCAGTGAGTCTCCAGCAGGGGAACCGCAGCTCCCCAGACAGCGCCCCGCAGTGGT[G/A]GGTGGTGCAGGAGTGCTGGCCCGGACCTCCACCCAGCAGCTGCCGCAGTATAGAGATGGTGGTGTTCAATGATAAAGCCAGCCCGCCCAGCGTGGGCTTCCTGGCCGGATACGGGTGAGTCTCAGACATGCCGATGACCACAACTACACATCAAATAATTCCTATTTTCATGAAGGCTGAAGACATTTAGGGTACAACGGATTTCCTTTGGATATCATTTTACACCACAAACACTACTGGCACCCTCTTCAACACATGCAAGTGAGCATGTTACAGTCTGAATGTGGCCTGAGTATGTGACTGAACCTCTGCCTGCTTTTTCCTCTGCAGTATCGTGGGTCTGTACATGTCCGTGGTGCTGGTCATCGGGAAGTTCGTGCGGGAGTTCTTCACAGGGATCTCTCGGTCCATCATGTACGAGGAGCTGCCGTGTGTGGACCGCGTGCTCAAACTCTGCAACGACATCTTCATAGTGCGCGAGGCGGGAGAGATGGAGATGG
Associated Phenotype:
Not determined