ZMP

si:dkey-116g14.1

Ensembl ID:

ENSDARG00000074739

ZFIN ID:

ZDB-GENE-070912-352

Description:

Novel protein similar to vertebrate SLIT and NTRK-like family, member 3 (SLITRK3) [Source:UniProtKB/

Human Orthologue:

SLITRK3

Human Description:

SLIT and NTRK-like family, member 3 [Source:HGNC Symbol;Acc:23501]

Mouse Orthologue:

Slitrk3

Mouse Description:

SLIT and NTRK-like family, member 3 Gene [Source:MGI Symbol;Acc:MGI:2679447]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa10873	Nonsense	Available for shipment	Available now
sa39881	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa10873

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110447	Nonsense	488	875	3	4
ENSDART00000140844	Nonsense	498	882	2	2

Genomic Location (Zv9):

Chromosome 2 (position 36537473)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	36834183
GRCz11	2	36816640

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CAATGAGATACGAGAAATCCAGCCCGCTGCCTTCAGTTTAATGCCCTCCT[T/A]GCAGCTAGTCTTTCTCAACAAMAACCTCTTGCGAACGTTGCCCATGGGAG

Long Flanking Sequence:

AAGACCCCGACCCTCAAAGACACCTCCCACACCACGTAGCGTGTTCCCTAATCAGCCACCTGTAGCCGGATACCAGACAAGGCCACCAATACCAATCATTTGCCCGATTGGATGTACCTGTAACTTGCATATTAATGACCTTGGTTTAACAGTCAACTGTAAGGAAAATGGGTTTCGGAACATATCTGAGTTGATGCCTCGACCCTTGAATGCTAAAAAGCTTTACCTAAGTGGAAATCTCATCCAGAGAATTTACAAGTCAGATTTTTGGAATTTTTCCAGTCTTGATTTATTGCATTTGGGAAACAATCAAATATTTTATGTCCAAGAGGGGGCTTTTGTTAATCTCCCTAATTTGAGAAGCCTTTACCTGAATGGTAATAATATAGTGAAATTAACTATTGATATGTTTCATGGCTTGCATAGCCTTGAGTATTTATATTTTGAATACAATGAGATACGAGAAATCCAGCCCGCTGCCTTCAGTTTAATGCCCTCCT[T/A]GCAGCTAGTCTTTCTCAACAACAACCTCTTGCGAACGTTGCCCATGGGAGCATTCGAAGGTACCTCGCTGACACGTCTGAACCTGCGCAACAACTACTTTCATTGCCTCCCAGTCAGCGGCGTTCTGGAACACCTGCAAGCTGTAGTCCAGATCGACCTGAATCAGAACCCCTGGGACTGCTCCTGCGACATCATCCCTCTCAAAGAGTGGCTGGACACGCTGAGCTTAGTGGTCATAGTAGGAGAAGTGGCATGTAAGACCCCCGAGCTGGTCTCAGGAAAAGATTTGCGCACTCTGAATTCTGAAGTGATTTGCCCTGAGCTCAGACAGTCCTCACTGTCTCCTGCAGAATCAGATAGCGGGCTTATCACTACGTATCCCGAGGTGGGGCCGCATCCACCGAAAGGTGCCATACCCCTCTCGGTCTTGATTCTCAGCTTGCTGGTTCTGTTTGTGTCTGCCTTCTTTGCTGCTGCAGCTCTCTGCGCATATGCTCTGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa39881

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000110447	Nonsense	717	875	3	4
ENSDART00000140844	Nonsense	727	882	2	2

Genomic Location (Zv9):

Chromosome 2 (position 36536787)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	36833497
GRCz11	2	36815954

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTGGTGCACCCTCCTCGCATATGTGCAGCAACACCGTTTACAAAAGCGGA[C/T]AGGAGGAGTCAGGGCAGAAGCATCCATTCTCAGAGACAAAAGAGAGTGGG

Long Flanking Sequence:

GCGACATCATCCCTCTCAAAGAGTGGCTGGACACGCTGAGCTTAGTGGTCATAGTAGGAGAAGTGGCATGTAAGACCCCCGAGCTGGTCTCAGGAAAAGATTTGCGCACTCTGAATTCTGAAGTGATTTGCCCTGAGCTCAGACAGTCCTCACTGTCTCCTGCAGAATCAGATAGCGGGCTTATCACTACGTATCCCGAGGTGGGGCCGCATCCACCGAAAGGTGCCATACCCCTCTCGGTCTTGATTCTCAGCTTGCTGGTTCTGTTTGTGTCTGCCTTCTTTGCTGCTGCAGCTCTCTGCGCATATGCTCTGAAAAAGCGTGAAAAGCTTCCATTTAGGAAGCAAGGGGAAGTTGGCCTGGCAGGCATTCAGATGGAATGTGGAATATTCACAGAACAGCCATCTACCTTACCAGAGACTCCTCCTTCCAATCACGTGTACGATAGCATTGGTGCACCCTCCTCGCATATGTGCAGCAACACCGTTTACAAAAGCGGA[C/T]AGGAGGAGTCAGGGCAGAAGCATCCATTCTCAGAGACAAAAGAGAGTGGGTCACACTACAGGACACTTGTGGAGAAAGAAAAGGAGTGGACCATGGCCATCTCCAGCTCCCCCATTAACACTATTGTGAGCGTTGGCGGGCCGTGTGGTGACATTGCCGGCTTTCGTGAAAACGGAATACTCTGCCCGACTGTCATTGATAGCCAAGGTCCCACACCCAAGGTGGGATTAGTGGACAGTCTTTTTGGCACAACTCCTCAGTTTAGCAACCTGCCTGACAGACACACGCACCCTCCCTCAGAGTATCCACATGCCAAACAGGATGCCAGACAAAAGCAAACGATCACAACCACCACAGGGACAAGGACAGGATGTCCTAATCAAACCCAAAGTGATTACCCTGAGCTGAGGGCTAGACTCAAAACAAAGATGGATTACATTGATATGCTGGATAGGTCATATCAATTCTAAGACATCTCAGATATAAGACTGCACATCCAA

Associated Phenotype:

Not determined