ZMP

si:dkey-210e6.2

Ensembl ID:

ENSDARG00000074638

ZFIN ID:

ZDB-GENE-081104-370

Description:

Novel protein similar to human and mouse lipoxygenase homology domains 1 (LOXHD1) [Source:UniProtKB/

Human Orthologue:

LOXHD1

Human Description:

lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:26521]

Mouse Orthologue:

Loxhd1

Mouse Description:

lipoxygenase homology domains 1 Gene [Source:MGI Symbol;Acc:MGI:1914609]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa31624	Essential Splice Site	Available for shipment	Available now
sa41097	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa31624

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109492	Essential Splice Site	402	597	9	12
ENSDART00000133456	None	None	646	None	10
ENSDART00000140793	None	None	1507	None	31

Genomic Location (Zv9):

Chromosome 8 (position 833693)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	700203
GRCz11	8	765946

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAAAGAGAAGAAAGAAGACAAGAAGAAGAAGAAGAAGAGTAAGAAGAAGA[G/A]TGAGGATGATGATGAGGAGGAGGGTGGAGAGGAGATGCGGCAGGTGGTGC

Long Flanking Sequence:

AAAGACGGAGGTGCTCGGACTCAGCAGCAGATCCAATAACTATGAAAGAGGAACCACTGAGATATTCAAGGTACAGTCAAAAACACAGCGTTCCCACCATACCTGTCAACCCTTTTTGCAGATTCTCCTGTATTTTCCCCTACTATCCCGCTATCATCCAGTCCACAAAACATTTTCTGTGTACTCTTTTTAGCTCAAACTGAAACACACACACTCTCTAGACTAGAGACAGCAGAGAGGTCTCCTTTGGGAGCCAAGATGCATGATTATCAGTAAACCCAGCCCTAGTCACACTCATTCATATTGATCTATGGTGTCTGTCACACAGGTCGAAGCTAAAGATGTGGGGAAAATCTTCAAGATCCGCGTCAGCAATGATGACACGGGCATCGGAGCTGGATGGTTTCTGGACCGCGTGGAGATCAAGCGTCTGGTCATGGCCATGGTGCCCAAAGAGAAGAAAGAAGACAAGAAGAAGAAGAAGAAGAGTAAGAAGAAGA[G/A]TGAGGATGATGATGAGGAGGAGGGTGGAGAGGAGATGCGGCAGGTGGTGCTCACTTATTCGTTTCCCTGCGACCGCTGGCTGGCTTCAGATGAGGAGGATGGAGAGCTGGTGGTGGAGCTTCTGCCGGAGGATACAGAGGAGCTGGAGGGTACAAGAACACTTCCAGAACAACACTGTATCTATCAGACAAACGACACTCAAAACACACTTTAGAAAGCACATCAAACCACACCCAAATACTCGGAATAACACAGAAACTGCATGAAAACACTCGGAAGTTAGAAACAGCATAACAATACACTGAAACAGCTGGCAGACTTAAAAAAAAACACTCTGGATAACCTAGAGACCACATAATAACACTCTTAAAACACTATAAGTAACCTAGCAACCACATAGCAACACTCTGAAGACACTCTAAATAACCTAGCAACCACTTAACAACACTTTGACAACACTCTAAATAACCTAGCAACCACATAACAACACTTTGACAACA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa41097

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109492	Nonsense	489	597	10	12
ENSDART00000133456	None	None	646	None	10
ENSDART00000140793	Nonsense	999	1507	21	31

Genomic Location (Zv9):

Chromosome 8 (position 830492)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	8	697002
GRCz11	8	762745

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTTCATCAACATCTACGGGGAAAACGGAGACACCGGCGAGCGGCGCCTC[A/T]GAAAGTCCAACCATATGAACAAGTTTGAGCGCGGACAGGTGAGCGGACAT

Long Flanking Sequence:

ATAACTTAGCAACCACATAACAACACTTTTAAAACACTTTGAATAACCTAGCAACCATATAACAACACTTTAAAAACACTATAAATAACCTAGCAACAACAAAACAACACTTTAAAAAACACTAAGAATAACCTAGCAACCACATAGCAACACTTTTATTATTGTAACTACTATCAAATAACTCTGAATTTCTTAGCAACTACCTAATGACACCCTAGCAACCACTTGAGTATGCCAAACCAGTCTTTCTGTCAGATCATGCAGGAAGCAGTGTAACGTAAACGCATAAATCACAGATGATCACAGATGTCTGCTGTTTCACTAATCAAATCATGATCCTGCATTTCTGGCTTGTATTTTAATAATGCATCACCTGTTGTGCTTCAGAGAACACGTATGAAGTTAACGTGTTCACGGGAAACATGATGGGCGCTGGAACGGATGCTAACGTGTTCATCAACATCTACGGGGAAAACGGAGACACCGGCGAGCGGCGCCTC[A/T]GAAAGTCCAACCATATGAACAAGTTTGAGCGCGGACAGGTGAGCGGACATCTGACACCTGCACTCATCTTATTCACAGCAGATTCACACGTATAGTCTTACTCATCTGTTAATGTGAGAGAGATCATTCATTATTCAACGCACACATCGAATATGAATCCAGGGCAACTCGACAGACCCCGTCTCCAAAAAACTGGGTTCAGTTGTGGTGCTGTGAATAAACTTTTAATTAACACCCATCAGTTTTTTGTGCATTTTGAAAAAATAAGATTAATTTAAAAGCATATATATATATATATATATATGCGTTTTATATCCTACATCATATGTATTTTTAAAATTTATAAAATTTAATTATTTATATTGTTTATAATGTTGGTAAATAAATAAATAAATAAATAAACATCAATTATATTTATATTATTATTATTATATAAAGAAACAATTTAAGTTAACCCTTAAGTTATTGGTTATCGGTTGGCCCACATGGAATCTGCGCGT

Associated Phenotype:

Not determined