ZMP

GRIK2 (1 of 2)

Ensembl ID:

ENSDARG00000074515

Description:

glutamate receptor, ionotropic, kainate 2 [Source:HGNC Symbol;Acc:4580]

Human Orthologue:

GRIK2

Human Description:

glutamate receptor, ionotropic, kainate 2 [Source:HGNC Symbol;Acc:4580]

Mouse Orthologue:

Grik2

Mouse Description:

glutamate receptor, ionotropic, kainate 2 (beta 2) Gene [Source:MGI Symbol;Acc:MGI:95815]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa42644	Nonsense	Mutation detected in F1 DNA	Not yet available
sa36014	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa42644

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109264	Nonsense	82	871	2	17

Genomic Location (Zv9):

Chromosome 16 (position 2691922)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	1850819
GRCz11	16	1887168

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAGTGGCTGCCATCTTCGGGCCCTCGCACAGCTCCTCTGCCAACGCGGTG[C/T]AGTCCATCTGTAACGCTCTCGGGGTGCCACACATACAGACCAAGTGGAAG

Long Flanking Sequence:

AATATACTATTTTAAAAATTTAAATATAATATACTATAATATACTATAATATAATATAATATAATATAATATAATATAATATAGTATAATATAATACAGTATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAAAATAATATAATACAATACAATACAATGCAGTAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATATGGACATAATGATGGGCAAAAATAAATAAATCTGTGTATTTCTCTGATGCAGATTCAGTGTTTGTCTACTTACACATAAACTAGAGTCCAGAAGGTGACTAAAGCAGTTTTTCATCACTGTGTGTTGTGTTTGTCCAGCTTGTGACCAGCTCTCTCTGGGAGTGGCTGCCATCTTCGGGCCCTCGCACAGCTCCTCTGCCAACGCGGTG[C/T]AGTCCATCTGTAACGCTCTCGGGGTGCCACACATACAGACCAAGTGGAAGCACCAAGTGTCAGACAACCGAGACTCCTTCTACGTCAACCTGTACCCCGACTTCTCCTCCCTCAGCAGGGCCATTTTAGACCTGGTGCACTTCTTCAAGTGGAAAACGGTCACCGTGGTTTATGACGACAGCACAGGTGAGAGCTAGTTCACTGCTGCGGCACACTGTGCACTACAGTTGAGTTATTATTTAAAGATGTTTAACAGCAAGGTTTTTTTTTTTTACAGTATTTCCTATAATGTTTTTTTTCTTCTGTAGAAAGTCTTATTTGTTTTATTTTTGCCAAACCATTTTAAGGTCAATTTTTTTTATTGTCTACAGAACAAACCACTGTTATAAAATGACTTGCATAATTTACCCAATTAACCTAATTAAGAAAAACAATATACATGGGGGTTAATAAAATATGGGGGCTAAAAATTTAGACTTCAACTGGATGTACGTATGCAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36014

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000109264	Nonsense	562	871	13	17

Genomic Location (Zv9):

Chromosome 16 (position 2841931)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	2000828
GRCz11	16	2033881

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAGGTTTAGCCCCTACGAATGGTATAACCCTCACCCGTGCAACCCCGACT[C/A]GGACGTGGTGGAAAACAATTTCACCCTGCTAAATAGTTTCTGGTTCGGAG

Long Flanking Sequence:

AGAAATGTATATAGGGCAACGTTTTCAGAATGAGCCTAGGTTGACATACCCACCCTCAAACCTTTATGAGTTTCTTTAATCTGTTTCACACACTAAGCTGTATGTTTTGAAGAACTCAGAAAACTAGTCAATAACTACAGGTTTCCAGCATCCTTTACTATCATTTCTTGTGTTAAACAGAAGAAAGAAACAAACTTAATTGGAACAAGTTCAGAATAATTACTTTTTGACTGAACTATCTTTTTAAGAGAGAAACAACAACAACAACAACAACAACAACAATAGAAGTGACCATATTCCTCCTGATATCTATTGTAATGAACTGATAACTGTGCTAACCTGTTCTTCTTGTGTTTCTTTAGGTTGACCCACCTACATTGCTTCATTATTCCATCTCTGTACCACATACTCGGGACTAAAATATATCTGTGTGTTCTGTGTTGCTCGCCACAGGTTTAGCCCCTACGAATGGTATAACCCTCACCCGTGCAACCCCGACT[C/A]GGACGTGGTGGAAAACAATTTCACCCTGCTAAATAGTTTCTGGTTCGGAGTTGGAGCTCTCATGCAGCAAGGTAGACGCCTCTGCCTGCCCCTCTTATCACACATCCCACTCTTTTGCTGGGGGTCTCAACTTGCTCTTGTCAGGCCCACTGTGATGCATGGGTGCCTCTGTGCATGTAGTTCTAGAAGCGAATTGGTTGCTGGCCAGTGCGAATGGGGTTGTGTGGGACTTGAAAGTGGATGTGGGTTGAGGATCAAGGGGTTTTGTTACAGTAGTTGCATGCTAAACTTTCTTTCCGTAACCACCATTGTCTTGACTCTTCAGGGCTTCCAAGCAGGTAAGTCTAATCCCGTGTGCAAAAAATGGCAGAATGACATGTGTATGACTGCCTGTGCATTCTTGACCCTAACCCTGACGCCACATCTTCTCAACTTTGCAGGATCTTTGAGTTTGAGAAAGTCTTGCGGTCTTTTAAGCGATCGGAAGGCTGTGATACTTG

Associated Phenotype:

Not determined