ZMP
si:dkeyp-46c9.4
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to human and mouse bromodomain and PHD finger containing, 3 (BRPF3) [Source:Un
Human Orthologue:
BRPF3
Human Description:
bromodomain and PHD finger containing, 3 [Source:HGNC Symbol;Acc:14256]
Mouse Orthologue:
Brpf3
Mouse Description:
bromodomain and PHD finger containing, 3 Gene [Source:MGI Symbol;Acc:MGI:2146836]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21211 | Nonsense | Available for shipment | Available now |
| sa31632 | Nonsense | Available for shipment | Available now |
| sa2418 | Essential Splice Site | F2 line generated | Not yet available |
| sa34326 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa21211
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109819 | Nonsense | 12 | 543 | 1 | 10 |
| ENSDART00000140717 | None | None | 585 | None | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 11827664)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 10841460 |
| GRCz11 | 8 | 10879165 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTTTTGCTTTTGTAGGTGAAGATTCACCAGGCAGTGACTGAGCATCAGT[T/G]AACTCCGGTTCTGGTACTGCTGAGCTCCACTTTAGAGCAGCTTCAGGAGA
Long Flanking Sequence:
CTTTGACTTGGCTGCTTTTTCAGCCCTGCAAAACCACACAGCGTATACAGTGGATGAAAGTGGAGACCTTTCTCTAAAGTACTTCCTTTCCAACAGACTGGTGGTTTAGAATAATCTATAAGTGATAATGCAACTGAACATGCATTAAGGCCAAGTTTATCCACTTGCACTTAAAATTGTATTATATTTTATGAAAAAGGCATGTTCTTATTCAAAATAACTTTTTATTGGACCGAAATGTATTTTTGTCTGTGACTGAACAACAAGACAGAACATTTTAGGTCATTTTTCCGGAAATTTAAATGATATTGTAATAAAGCAGTTCTGTCAGCTTTTAGAACCACATTAGCAAATTGACGATCTCAGAGCTCACAGTCATGGGCCACAATTTGCATAACTTTAATTTCATGTAATTTTTGTTTTAAAGAGTTGTATTTAACATAGTCTTGTGTTTTTGCTTTTGTAGGTGAAGATTCACCAGGCAGTGACTGAGCATCAGT[T/G]AACTCCGGTTCTGGTACTGCTGAGCTCCACTTTAGAGCAGCTTCAGGAGAAAGACACCGCAAAGATATTTGCACAGCCTGTCAACTTGAAAGAGGTCTGTCTTATTATCATTGGTAATTGTTTGGTTTTAAATTAGTATTATAGAATTACCATTAAAATGTGGATTATCACTAGAGTTTGAAATAGCTGTTATCTGTTTTAATGTTTTAAAATATAATTTAGTGAAGTGTTTTCGAGAGGATCACGTGCTTATAATTTACCACGGCTGGTCCCCCATTAGCTAACACGTGATTTACCAATCAGAGCCATGATTTCCTCTACATTCATTCTTCCGTGGCGGGGCGCCACACCAAAATTGGTCCTGCCACGGCTACATTACAGCTTTTCATTCACAACATTCAGTCGTGTTTTTATTAGTAGTGGTTGATAATCGCACCAAAACATATTAGAAGGTAAGGTAATAATAACAGCGCAAACTTTTCTGTAACCGTAGTAGTGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31632
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109819 | Nonsense | 194 | 543 | 3 | 10 |
| ENSDART00000140717 | Nonsense | 151 | 585 | 2 | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 11822417)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 10846707 |
| GRCz11 | 8 | 10884412 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGTCCATGCGCTCGAGCGGCGCACGAACACGACGGGTCCGCCTGCTGCGA[C/T]GAGAAATCAACAAAGTCCGCTTTAAGCAGAACTTAAAAAACTCACACATG
Long Flanking Sequence:
AGCATGTAAATATGGATGTGAATGTATTCTCTGGTGGTCAATGTTGGGCTTGTCTTAATAGTTTCAACAGTTGTTATCTGGGAAAAGCATATCTTGGAATGTCACGACTGACCAATCAGAATCAAGTATTCCAGATAAAACATGTAATTATTGCTATCTATTTTCTTATGGTCATTAGCATACAGGACCCTAACTGTTTAAGGTTTTCAGTTTACCCCGAGATCCTGAAAATCACAACATAATGCTTGTTTACACGCACTATTTACACACAGCTCATTCTGATTCTTATCATGCTGATCACTGCAAGCCAAATAGGAAGCAGTATATCTTCTGTTACTGATGGTTTGGTTCTGTTGTTTATAGTTGACACGCTGCTAGACCCTGATAATCGATTGCACATGACGACGGAAAACCAGTTGAGGGAGCTGCTAGAAAAATTAGACGTGGTGACGTCCATGCGCTCGAGCGGCGCACGAACACGACGGGTCCGCCTGCTGCGA[C/T]GAGAAATCAACAAAGTCCGCTTTAAGCAGAACTTAAAAAACTCACACATGCTCAATGGAGACCTCAAAGAAGATGATGACGAGGATGATGAAGACAAAGAGATGGATGCTGATCATAACCTGTCATCATCGTCGTCAGATAAAGGTGAGATGTGCCTTCCCTTCAACTTTCAAAATTTCATTTATTTATAACTTTTTTGAGAATTAAATGATTTTTTTCGTATACTGGAACCAAATAGTGATTTAATAAATCTCTGAATGCTGTTTAAAGGCCCATATGATTTCTTCCATAACTGTTTGCATTCCCAAACATAACCAACATTGTGGGCTCTATTTTGAAGGTCTGGGTGCTAAGTCTAAAGCATGTTGTTCAGTAGCATTAAGGGAGTGTCCAAATCCACTTTTGCTATTTTAAGAATGGAAAAATACGCTGCGGCACATCTAACAGGATTGTGCTTATTCTCTTAATGAGTTATGGATGTGTTTTGAGAATAAAGACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2418
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109819 | Essential Splice Site | 491 | 543 | 9 | 10 |
| ENSDART00000140717 | Essential Splice Site | 473 | 585 | 6 | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 11813883)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 10855241 |
| GRCz11 | 8 | 10892946 |
KASP Assay ID:
554-2536.1 (used for ordering genotyping assays)
KASP Sequence:
GGATTTGGTGTGGGCCAAAAGCAGAGGATATCCGTCCTACCCTGCTCTGG[T/C]GAGAGRGGGCGCTCTAYGCCTATATTACTATCAAACTAYACTGSAGTGCA
Long Flanking Sequence:
ACCAATGGTTTCAGAAAGCACAAAGATGGCGGCTCTGACTCAGAATGCAGCTCATCTCCGACTCTGAGAGAACTGTGAGAGGACAAAACAAATCGAAACTTGTCTGCATCATATAGTACATTTTGCACACCGTTAACAAATATTATTTATGTTGGTTTCAGTATCTCACCGCCTAAAAAGAGCAGAGGAAAACCTGCTTTGTCCAAAGTACCATTTTTAGAGACTGTTAATGGAGACTCTGACTACACTGGGACTGGTAAGAAATTAATCCCATTGAAATGTCAGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGGTGGGTGTGTTTGTGTATATACTTATATTTACAGTATTTGTTCTGAGCAGATGTGCTGTCGAATGGAGATACGCCTGAACCTGAACCTCTGGATTTGGTGTGGGCCAAAAGCAGAGGATATCCGTCCTACCCTGCTCTGG[T/C]GAGAGAGGGCGCTCTACGCCTATATTACTATCAAACTACACTGCAGTGCATTATTTGGAGCCATGCAAATGTTAGTATGTTAAAAATGAGCATTAAGAGATCATTAACCTGACTCTTATTTAAAATTCAGTTCTTTTTAATTAGTCTTCATGTTAATAGGATGAGTGTGACATCAGACAATTATCTTGTTTGCTCAATTAACATTATTTGTCTCATAATCATTTTCTTTGAAAACATATTCCTCATCTCAGTGTTTTTTGTTTACTGAACACATTTGACCAAGTTGGTATTCCAACAGTTGTATAGTTAACAGTGTGTTCGCATATTCCAATAAATAATCAAAATAATAAATTAATCTAAGTAAATAAATCCAATTCATTTTGTAGTTTTATGTTGATTGCTGTTGATTTCTCATGTTTTTAATTTCATTTAAATAGATTAAAGCTACATTTTGAGTTAATATTGTTAGATTATGTCCTGCACTTCTACAGAAAAAATAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34326
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109819 | Nonsense | 543 | 543 | 10 | 10 |
| ENSDART00000140717 | Nonsense | 525 | 585 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 11811911)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 10857213 |
| GRCz11 | 8 | 10894918 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCCGGAGAAAGACTTTTCCTGGTTCTCTTCTTCGACAACAAACGCACCT[G/A]GTGAGCCCAGCCTTTGGAGATTTTCTTGTTTTCCTTCAGATTACCCACCA
Long Flanking Sequence:
CTTTACAGACACACTCTGGAGACACCAAGGGCTTATCTTACATCTTGTAAAAGGGGTAAAAAAGGTGCCCTTTAAATTCATCTTTTTTTTTTTTTTTTTGATTAGTAATTTCACTCACAAATGCCAGTTGCATCCCTGGTTTACTCCAAGTAAAAAGACCTTTTTAAATGTTTTATTAAGGTACACTTTATAGCACTTCTGTGACACATTTTCATTTTGTTCTCATCTATTTCAACACAGACATGTCTAATAAAATAACTTCACAGTTGCATTTAGCACAGCTTCAAAGCAAAGCACTGACATTTAAAGCTGAAGCGGAAGGTTAAAATGGCTCTTCATTCTGTAGATCATAGATCCAGACATGCCTCAAGATGGTCTTTTGCATAACGGCGTCCCGATCCCTGTTCCTCCACTCGACGTGCTTCGCCTCGGGGAACAGAGACAAGAAGAAGCCGGAGAAAGACTTTTCCTGGTTCTCTTCTTCGACAACAAACGCACCT[G/A]GTGAGCCCAGCCTTTGGAGATTTTCTTGTTTTCCTTCAGATTACCCACCAGACTTTGCATTCTCAAATGACCAGAATCCGCTGGCTTTAAGGATTTTGAAAGGAACTGTGAGTGAATTCTCATTTCTTTTTTTTTTTGCTGTATCCGCAGGCAGTGGCTCTCGAAAGATAAAGTGATTCCTCTCGGCGTCGACGACACCACTGATAAACTGCGTATTATGGAGGGCAAGAAGACCAGTATCAGGAAGTCTGTGCAGGTGGCCTACGATCGAGCTATGAAGCACTTGAGTCGAGTTCGAGGAGATCATGGTTTCGTTGGCTCCAACTACATGTAGAGCAGAAACATCAACCACATCTGACTGTTTAAAACAGTAGTGGCCAACCCTGATCCTGGAGATCTACCCTCCTGCATATATCTCAGTTGCAATCTAGATCAAACACACCTGCCGGTAATTATCAAGTGCTGTTCAGGTCGTAATTAATTAGTGCAGGTGTGTTTGA
Associated Phenotype:
Not determined