ZMP
si:ch211-202h22.7
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate lipopolysaccharide-induced TNF factor (LITAF) [Source:UniProtKB/
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32783 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa2000 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa32783
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109919 | Essential Splice Site | 64 | 146 | 3 | 5 |
| ENSDART00000141207 | Essential Splice Site | 64 | 146 | 5 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 55198101)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 53981040 |
| GRCz11 | 1 | 54658691 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCTCAGTAATTCAGACGGTTCAGACTGCTGCGCCTCCTCCTGCCCAGAG[T/C]GAGTTATAAAGTCCTAGGCGATGTTTACACAACATTCATTTTCCTTCAGC
Long Flanking Sequence:
CCTTACGTACCTCCGGCCATGTAAATCGCGGTCTCCAGAAACGTCCGTGGGGCTACGTTTCCAGAATGAGCTTGGGTTGGCTAAATACGTCCCAGGAGCTACATTTTTCTTTTCTCGAATCCACCAGAGGCCGCTGTGTATGCTTTTTGAGATCTTAAATTTCTCTCACGAGTGCCATTCGTACCTGCTGGTCTCCCGTAGAGTCCACCAGAGACAGCTATCTGTCTGACTAACTGACCCACTCTCCACCTTCCCTAAACCCAACCATTAGTGTTTTCAAAAGCACCGATTGACCAGAAATGTATTTAGGGCTGCGTTTTCAGAATGAGCATGTGTTGCGAAAGCCACATAAACAGTCAGATTTGTGTTCTTGGCTTTTATAATTACATTTTTCTTCTCTTGCTTTCAGCTCCGATGGCTGTTTACAACCCACAGCCCGCTGTCATGTCGTCCTCAGTAATTCAGACGGTTCAGACTGCTGCGCCTCCTCCTGCCCAGAG[T/C]GAGTTATAAAGTCCTAGGCGATGTTTACACAACATTCATTTTCCTTCAGCTTAGTCCCTTATTTATCAGAGGTTGCCACAGCGGAACGAACCACCAACTATTTCAGCATATGTTTTACACGTTTATGTTTATTCAGTAGATGAATAAACTAAGTTGGCCTTAGCGTATGATTGTGTATGAATGTTTCGCAGTACTGGGTTGCAGCTGGAAGGGCATCCGCTGTGTAAAACATATGGTGGAATAGTTGGCAGTTCATTCCACTGTAGTGGCCCCTGATAAATAAAGAAACTAAGCTAAAGGAAAATTGATGAATGGATTTTAGTTTACGCAGTTTGCATGTTATTGTGGTGCAAATGTGGTTACTATTAAAATGAATACTAAAAGTATGGCCCAACCGACACCTAGTGTTTAATTTCTGCCTAGATGTTATATGTAATTTTCCTCAATATTTCTTCTTCTTTCTGTATAGCCACAGTGGTGCTCATGCCCTCACGACTGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2000
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109919 | Nonsense | 133 | 146 | 5 | 5 |
| ENSDART00000141207 | Nonsense | 133 | 146 | 7 | 7 |
Genomic Location (Zv9):
Chromosome 1 (position 55199174)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 53982113 |
| GRCz11 | 1 | 54659764 |
KASP Assay ID:
554-3218.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTTGATTCCCTTCTGTGTGGATTCCTGCAAAGACGTCCAGCATCGCTG[T/A]CCAGGCTGCAAATCTCTTGTGTATGTGTACAAACGTAGTTAAGCTTGTTC
Long Flanking Sequence:
ACTGTTGGTGTGGGGCATCTGCATTGGTCTCGGCATTTTCGGGTAAGCAACAGCATTCATCAGATTCTCACTAGCGGAACTATGGGACGCATTTATGTAGATTTGTATTTACAAGTTTGTATTTGTATTGAGTATATTTTTCAGTACTCTTTTCACCATGGAATGTAACTAAGTAATGCAACTAGTTGGTGGAGTAAGTCAATATTGTAATGCACTACTTTTAAAAGCAAGTTTCCCCAACACTGATCATGACAAAGATAATCAGTTATTAGAAATGTGTCATTAAAGCTATTTTGTTTAGAAATGTGTTTTTAAAAAATCTGCTCTCTGTTAGACAGAAATTACGGGAAAAATATTCAGGGGGCTAATAATTCAGAAAGGCTAATGATTCTGACTGTATAAAATGACCAATTGTGATGGTCATTGTTTCTGTCTAGGATCTGGCCGTGTTGTTTGATTCCCTTCTGTGTGGATTCCTGCAAAGACGTCCAGCATCGCTG[T/A]CCAGGCTGCAAATCTCTTGTGTATGTGTACAAACGTAGTTAAGCTTGTTCTGGAACAAGAACGGGGAAAAAGAATCTGGACTTGACTGTACTTTCTAATTCATTGACAAATAATGCTATACACCTTATGGGTTTCTCCTTGTTGCAACATAGGCTCATTCTGAAAATGTACATCTATATACATTTGTGGAGATTGCGAATTATGTAGCCAGAGGTACGTATGGCTGAATTTCTTTTTTAAAACGAATGCTACAAGGTGGTATGACACCGTTCCTTTTCGCGCTTACTAGCTGACCACTTACCTCCGTGGCTTTTTCACTGTTAACAAATTGGCCAGGGGCTTATCATGTTCGGTGGCGGACTTTTGATGTGGAGCGGAATTGGCTGTGAGGTTAGGTTCGAGTCAGGTCAATCGGTGCTTTTGAAAACACTATCAGTTGGGTTAGGGAAGTAGGTGGGCAGGTCAATCGGTGCTTTTGAAAACACTATCAGTTGGGTTAG
Associated Phenotype:
Not determined