ZMP
si:dkeyp-50f5.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate paired box gene 1 (PAX1) [Source:UniProtKB/TrEMBL;Acc:B0S7C8]
Human Orthologue:
PAX1
Human Description:
paired box 1 [Source:HGNC Symbol;Acc:8615]
Mouse Orthologue:
Pax1
Mouse Description:
paired box gene 1 Gene [Source:MGI Symbol;Acc:MGI:97485]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43535 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43535
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112872 | Nonsense | 66 | 345 | 1 | 4 |
| ENSDART00000132835 | Nonsense | 61 | 340 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 49185122)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 48868160 |
| GRCz11 | 20 | 48699377 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGTCGACAACTCAGGGTCTCTCATGGATGTGTGAGCAAAATCCTGGCC[A/T]GATACAACGAGACCGGCTCCATTTTGCCCGGCGCAATCGGTGGGAGTAAA
Long Flanking Sequence:
TTAAGGTAAGTGGTGCAAACAATTTATATGGGCTGAATTTAAACAAATTAAATTTACTAATGTTCATCTGAACTTCTCTGTTTAAATTCGGCCCATATAAATTGATTGCAACCACTTAACTTAAAAAAAATTGTTGATCCAATTAATAGCCTAGTTTTTTCAGTGATAGCCTACCTTTATAACGGGCGCGGCTTCAGTGACAGATTTTATACCAGTTTTTCTGACAATGCAAAAAGTGTTGCTCAAAATGATAATCATTACACATTAATAGCTAATGATAAATCTGCGTTGAGCAGAACTATTTTAAAACGCAGTGTTTCCTTCTTGCAGATCAGACGTACGGGGAGGTGAATCAGCTCGGCGGTGTGTTTGTCAATGGTCGGCCGCTTCCCAATGCCATCCGGATCCGGATTGTGGAGCTGGCGCAGCTGGGAATCAGACCCTGCGACATCAGTCGACAACTCAGGGTCTCTCATGGATGTGTGAGCAAAATCCTGGCC[A/T]GATACAACGAGACCGGCTCCATTTTGCCCGGCGCAATCGGTGGGAGTAAACCTCGGGTCACAACGCCAAACGTGGTGAAAAGCATAAGGGATTATAAACAGGGCGACCCTGGGATATTTGCTTGGGAAATACGCGACAGACTGCTAGCCGACGGAGTGTGTGATAAATATAATGTTCCGTCTGTGAGCTCCATTAGTCGCATTTTAAGAAACAAGATTGGGAACCTGTCTCAGCCGAGTCAGTATGACAGCAAAACCTCCCCGCCGCAGATCTCCTACAATCCCGTGTATCCGTACTCATACCCGAACACCATGTCACCCACCGGCTCCAAACTTGGCAGTCCTCCGGCTGTGTCTGTCAGCTTGTCCCGAGCCTGGCCCTCAGTCCACACCGTTAGCAATATATTAGGAATACGGGCTTTCATGGATCCTGCAGGTAATTCAACTACTATATTAAAGATAGCCCTTCAGGATTTGCGCATTCCAAGTCAAAGTTTGACG
Associated Phenotype:
Not determined