ZMP
scly
Ensembl ID:
ZFIN IDs:
Description:
selenocysteine lyase [Source:RefSeq peptide;Acc:NP_001103853]
Human Orthologue:
SCLY
Human Description:
selenocysteine lyase [Source:HGNC Symbol;Acc:18161]
Mouse Orthologue:
Scly
Mouse Description:
selenocysteine lyase Gene [Source:MGI Symbol;Acc:MGI:1355310]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa2295 | Nonsense | F2 line generated | Not yet available |
sa10972 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa2295
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000113596 | Nonsense | 41 | 450 | 2 | 12 |
ENSDART00000114347 | Nonsense | 41 | 450 | 3 | 13 |
Genomic Location (Zv9):
Chromosome 6 (position 26984921)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 27286132 |
GRCz11 | 6 | 27276693 |
KASP Assay ID:
554-2667.1 (used for ordering genotyping assays)
KASP Sequence:
AGAATGCAATTAATCGAATAACTGTTTTRCTGCAGAATATATATGGATTA[C/A]AACGCCACCACACCAGCCGATCCAGAGGTGATCAGGGTTGTTACTGATGC
Long Flanking Sequence:
TAAACTTGTGGGCTCTGACATCCATAGTAAGGAATGGACGTCGATTGCTATGGGTTTCCAACATTGCACTAAATATCCTACATTGTATTATACACAAGAAGGAAACTTATAAAGATTTTTGTAAAAAGGGGAGGGTGGGTATACCATGACAGAATTTTAATTTCTTTGAGAATTGTCCCTTTAAATATGCTTTGTAAAATGATTTAATATTTCCCTGAATGTGTTTAGACTCATGTACAATATTTTGCCCTTTTTTATCAGTGTAATCCAGATCATGGCTGAAAAGTTTGACCCACCTATAACCTTGAGTCATAATTTCCCCTCATTACATCACTGGGATTCTCACCTGGATCATCATGCTGTGGCTGATGGACCAGATAGGTAATGAATATGCCAATACAGTCCTATTCTGAACATGAAGTCATCCAAATATGATCTTCCACATGTTTCAGAATGCAATTAATCGAATAACTGTTTTGCTGCAGAATATATATGGATTA[C/A]AACGCCACCACACCAGCCGATCCAGAGGTGATCAGGGTTGTTACTGATGCTTTAATGGATGCGTGGGGAAATCCCAGCAGTAACTACCTTCCAGGTATGAAGCTGTACAACGTTATTCACATTTAAATAATCCCCGAAAAATAAATGGGATTTGTTCCCCCTCGCATTGATCAAAGATTAGAGTGGAGGGGTAATTCAATTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGAACAGTGTGGTTCAGTAACTGGAACAGTGTGGTTCAGGTTTTAGTGTTTAAGTTCAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGATTTAATCATTACTGAGAGTTCAAACACTGAAGAGCAAATTCATCGATGCGTAGCTCTACCAATCCTGAACCATGCGAGGCAGTGGCGACAGCGGAGAGGGAAAAAAAACTTCACCTGATGGGAGTGAAGAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10972
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000113596 | Essential Splice Site | 106 | 450 | 3 | 12 |
ENSDART00000114347 | Essential Splice Site | 106 | 450 | 4 | 13 |
Genomic Location (Zv9):
Chromosome 6 (position 26986314)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 27287525 |
GRCz11 | 6 | 27278086 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGTCGGTGGAAAAGCAGCAGACATTATTTTTACTTCAGGAGGAACTGAGG[T/G]GAGTCATGAAAATGAGCTTGTTTTTTNTTGTTGTAAAAGATAAAATASAG
Long Flanking Sequence:
GCTAGGTGATGCATTGAGTGTATGCTTTACTAAACAGATAGGTCTTTAATCTAGTTTTGAACTGGGAGAGTGTGTCTTAGCCTCGGACATTACCAGGAAGGCTATTCCAGAGTGTAGGAGCCATGAAAGAGAAGGCTCGACCTCCTTTACTTGATTTTGCTATTCTAGGTACTACCAGAAGCCCTGAATTTTGAGATCTTAAGGAGCGAGTTGGTTCGTAGCGAGACAGAAGGTTGGTTAGATAAACAGGAGCTAGATTATTTAGAGCTTTATAGGTGAGAAGTAATATTTTAAATTCAATACGAAATTTAACAGGCAGCCAGTGTAAGGAGGGTAAAATTGGGGTAATCTATCCCTTAAACAATATTTAAAATAGTTTTCCACTGATCTCTGATTAGGTTTGAAAGCCAGAGACATCATCTACCATTCGAGAGATGCCATTGCTAGGATGGTCGGTGGAAAAGCAGCAGACATTATTTTTACTTCAGGAGGAACTGAGG[T/G]GAGTCATGAAAATGAGCTTGTTTTTTGTTGTTGTAAAAGATAAAATAGAGCATCCCATTTGTTGATAACTATATAAATATTCCCTGTGTAAGGCAGTCAGTTTATTGACATTTAAGAATGTTTAGCCAAATAAACATTTATGAAACATAAAAGATTATTATGCTCTACTTTAATGACAAGGCTATGTACATTACTTGTTTCTGAGAAAAGTAAAAGCAGTCACAGCAGCAATCGTTCTCCTGTATGTCATGTTTAAAGTTCATGGCACACCCAACTTGGGTATTAAAAGTTTCCCAGTAGTAAATATGTTTTAAGAAGTCGTTAACATCCGATTAAAGACTGGGAAACTTATATTTGCAATAATTCCTTTCTATAGCATGTGAAGGCAGCAATAAAACAGGAGCGTCCAAACCTGTTCCTGGAGAGCCACTGACCTGCAGAGTTATGGTGGGTTCAGGTCATGACAGACAGATATTTATGAATTGAAAGCACATGAATGC
Associated Phenotype:
Not determined