ZMP
suds3
Ensembl ID:
ZFIN ID:
Description:
sin3 histone deacetylase corepressor complex component SDS3 [Source:RefSeq peptide;Acc:NP_001003493
Human Orthologue:
SUDS3
Human Description:
suppressor of defective silencing 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29545]
Mouse Orthologue:
Suds3
Mouse Description:
suppressor of defective silencing 3 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1919204]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9868 | Nonsense | Available for shipment | Available now |
| sa40378 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa9868
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109590 | Nonsense | 167 | 317 | 7 | 13 |
| ENSDART00000111646 | Nonsense | 177 | 318 | 7 | 12 |
| ENSDART00000114446 | Nonsense | 169 | 318 | 7 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 17272265)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 15000919 |
| GRCz11 | 5 | 15501136 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GYATTTTAGATTCTATGGAGGTAAAACCTATCATGACCCGGAAGCTCCGG[C/T]GACGACCCAATGACCCTGTGCCCATTCCAGACAAGMGGAGAAAGCCTGCA
Long Flanking Sequence:
TTTAGTATGACTGCTTATTTTCGTATGTACTTAAGTTCTGGTCAGAATATGTATGTTGTTTAATTTGCAATGAATACATCTGTCATGCCAAACTGTTAATTCATGAATATTTTAACATTGTATTTTTACAAAGTCATTGAAAACATTAAAGTAGGCATTTTACCTGCAGTTTATATGCTTGCTATGTGTTTAAAATCTCCTATTTAAATATAATTTAATGCAGACACCAAAATAGAAGGTGTCCTCTTTGACCCTCACAGAAGTTGTATAGATAACTATTGTATTTTAATGTTTTTTTTTGAAGATTGAAAACCTAAGTGACCATTAGTAATAGCAATGGCATGAGAAAGCTCTACCAGTACAGTTTTTGGAACTGATACTTTTTTCTTTTGTTTCATTCATTTTTGTATAAGATATTTCTTCAAGCACTAAAACTTGCTGTCTATTATTGCATTTTAGATTCTATGGAGGTAAAACCTATCATGACCCGGAAGCTCCGG[C/T]GACGACCCAATGACCCTGTGCCCATTCCAGACAAGAGGAGAAAGCCTGCACCTGATATCCTTCATAGTCACTGGAAACACTCAAACCCATCATATTCAACCACAAACATCACTTTAAGCCATAGTCCCCCCAAAAAAGAAGTTTACTCACTATTTACTCTCCCAGAAGTCGTTATAAACCTTTATGAATGTCGTTCTTCTGTTGAACCAAAAAGAATGTTAAAAACTTGTAACCATTGACTTCCATAGTAGTAAAAACAGATACTATAGAAGCCAATGGTTACAGGTTTCCACCATTCTTCAAAATATATTTATTTGCATTCAAGAGAAAAAAGAAAGTCATAAATGTTTGAAACAAGTAAAAAGTGAGTGAATAAGGACAGAATGTTAATTTTTTTAAGTATCCCTTCAAACCAGTCATATCTCCTTTTGTAACACTTTAAAAGAAAGAAAAGATATTATAGGAAATTAATGTTAATTAATATTATAGGAAATGCTGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40378
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109590 | Essential Splice Site | 221 | 317 | 10 | 13 |
| ENSDART00000111646 | Essential Splice Site | 223 | 318 | 10 | 12 |
| ENSDART00000114446 | Essential Splice Site | 223 | 318 | 10 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 17274969)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 15003623 |
| GRCz11 | 5 | 15503840 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAAATTGAATTGCAAATAAACTGAAAATCTATGTTTTGGGATGTTTCTTA[G/A]CCTCCCCGTCTTCTCCAGAGCACCTCCCGTCCACTCCAGTTGACACCCCA
Long Flanking Sequence:
TTTGACGTATTTATATATGTTTTATATCTTCTAAACGTGAATTTTGGCACTGTTTTTTACCACAGCTTTTTGTATACCTAGCTTATTCATATCTTTTAAGACTAAAATACTGCTAAAAATGTTATTTAAATTTTGGTAGACCTTTAAATTCAGCTCATATAAATTGTTTGCAAGCACTTAACTTAAAAAAATGTAGTAAATCCAATGAATATTTTTTTTGTGTGCAGAAAATCGGAAAATAACACTGACACAGTGTTAGAATTACTGGACATTAGTGTTTGACCAAGAAATCAGGTTGCTCTTCAATGTCTGTCTTGTTTTAAATCAATCTGTCTTTTTGCTTCGTTTTCTTTATAGCTCAAATCTCCGAAAAGACAAGGTATGGACGTTTTGTCTTTTAGAGGTGATTCCCCCCACGTAATTTCCAGTTTAATATAACCACAAAGTTTTTAAATTGAATTGCAAATAAACTGAAAATCTATGTTTTGGGATGTTTCTTA[G/A]CCTCCCCGTCTTCTCCAGAGCACCTCCCGTCCACTCCAGTTGACACCCCATCTCAGCGATATGAGGCACGGATAGAGGAGGGCAAACTCTACTATGATAAGAGATGGTAAGGTTCTCTCTTTTACTGGGCTTGTTTTGAAGGGTATTGGTGTTGTTATAGCCTCTGCCATCACAGGCTAATTGCTCATGCGTACAATGAAACACTGGCTTCTGAATCTAGCAGGGAGATGCAACTAGAAATGCATAGAGTCACTTAATAATACTTCTGCTGACCACAAGATGGAGCAATGACACTTCTGATTTTCATTACTACGATACTACATTTTACATTAACCACAGTGTCTCTGTTTGTCTGTCTTTCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCGTCCATCCATCCATCCAT
Associated Phenotype:
Not determined