ZMP
si:dkey-250l23.4
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate ring finger protein 180 (RNF180) [Source:UniProtKB/TrEMBL;Acc:B0
Human Orthologue:
RNF180
Human Description:
ring finger protein 180 [Source:HGNC Symbol;Acc:27752]
Mouse Orthologue:
Rnf180
Mouse Description:
ring finger protein 180 Gene [Source:MGI Symbol;Acc:MGI:1919066]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31664 | Nonsense | Available for shipment | Available now |
| sa34439 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31664
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092915 | Nonsense | 171 | 365 | 2 | 5 |
| ENSDART00000137647 | Nonsense | 169 | 363 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 32783795)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 31926521 |
| GRCz11 | 8 | 31935753 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTGAGTAAAAGAGAGAGAAGGAGGATGAGGAGCCTGAGAAGGAGACAG[C/T]GAAGGAGAGATCTCTGCCGACTAGAAAATCTGCAGGTGAAGCACGAACAC
Long Flanking Sequence:
CCCAGCACAAGTAAGGTGTACCTAATAATGTGGCCAGTGAGTGTATACTGTACATTTAAGCTACATTGCATATTATTTAAACTGAGCACACAGACTTTCAATGAGATGTGACTGAAAATCAGGGGTTTCTCTTAATTTCTTTAAAACAGAAGTAACTTGTCAGCTCAGTAGTCTTCTCATTAGACACTTTATTACTCTAACTCAGTTATTAAAGTTATTACATTTACTGTTTTTTTTTTTTTTTGAATAATTATTTTTATGAGTATTTTAAATTTTGTCTAATTTCCCCTCTTCTGGTGATTGGAGGCTCTGGTGAGGATCAGGAATTGAGCCGCAGAGCTCATCTGATGTCTCTCAGCAGCTCTGAGGAGGAATTGGAGACTGATGGAGCTCTAGCAGGGCTCAACGGAGCTTCATCCCAGCTCACCATCTCTCCCACGGGGGAACGACGTCTGAGTAAAAGAGAGAGAAGGAGGATGAGGAGCCTGAGAAGGAGACAG[C/T]GAAGGAGAGATCTCTGCCGACTAGAAAATCTGCAGGTGAAGCACGAACACTGGCAAACACAGCCAGGGTTATGGAGTCAAGTATTGTGCAATAATAATGATATAAAGTTGAAGTCAGAATTATTAGACCCCCTTTTTATTTTTTCCCCAATTTCTGTTTAACGGAGAGAAGATTTTTTCAACACATTTCTGAACATAATAGTTTTAATAACTCATTTCTAATAACTGATTTATTTTATCTTTGCCTTGAAGACAGTAAATAATATTTTACTAGATGCTTTTCAAGACACTTCTATACAGCTTAAAGTAAGTAAAAAGCTTAAAGTAAGCTTAAACTTAACTGCTTTTATTCTTGCTGAAATAAAACAAACAAGACTTTCTCCAGAGGAAAAAAATATTATCAGACATACTGTGAACATTTCCTCGCTCTGTTAAACATCATTTGGGAAATATTTAAAAAAGAAAAGAAAATTTAAAATTTAAAATTTAAAATTTAAAAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34439
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092915 | Essential Splice Site | 256 | 365 | 3 | 5 |
| ENSDART00000137647 | Essential Splice Site | 254 | 363 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 8 (position 32777608)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 31920334 |
| GRCz11 | 8 | 31929566 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCCTGCCCACTCTGCAGGACCACCATCACACACGTCTTCTTCCAGAAGG[G/T]TCGGTCTCACATAATAATATTACATTTAAAAAGTCTTTCTTTCTTTCTTT
Long Flanking Sequence:
TGAGTATTTGTAAGTTGTCCCTTATTGCTAAAAATGTGTAAATAAAACCAGATTCAAAACAGGCCATTTGTACCATGTTTTTTAGCCGTATAAAAACAGTAATCATCTGTGTGGGTACATTTTACCTGCTGGTGGTTTTCACTATGCTGTACAACAACTCCTGGTAGTTCTAGTGTTAAAGTCCCGTTTACAGAGAAAACGATGGTCAAGTATCAATGTGAAGCAGATCAGGCTGTTGGTCTGATCTTCTGCTCTCCTCTCTCTCTCTCCACTAAAGGGCTCTACAGGACAGCCATCCAGCAGCAGCAGTGAGGATGAGGACGAGCGTGAGGGCTTCATCTGTGCTGTGTGTCTGGATGTTTATTTCAGCCCATACATGTGTCACCCCTGCAGCCATGTCTTCTGTGAGCCCTGCCTCCGGACGCTGGCCAAAAATTGCCCCAGCAACACTCCCTGCCCACTCTGCAGGACCACCATCACACACGTCTTCTTCCAGAAGG[G/T]TCGGTCTCACATAATAATATTACATTTAAAAAGTCTTTCTTTCTTTCTTTCTTTCTGTCTATATTTTTCATTTTTTTGGGTAATTTGTTAAAAATCTGTCTGTCTGTCTGTCCGTCCGTCCGTCCGTCTGTGCATAAAACCAATAACAGCGGCTTGAAAGATTTAAATGAGATATTCCCACAGAACGCCACTTAATATTACAGTTTTTCTCAGTCGCTTTGGTGCATTTCTCACAACACTATTTACATTTGCACAACAGTTAATGCATTTCTCAAAACAATTAGTCATTTGTGCACATCATAATAGCAGTTTCTCATTCCTTCCAACACATTGCAAATGCTTTTGGAAATGCATCAATTGCTTTCATACGACTCTCTGCTGTTTAGAACATTATCATCTGCTTATGTCATGTCAGTCAAAATTAACTAAACTTGTGAATGCTGAATAGTCATTCCATATAAAACTAATAGTCCTTGTTTCATTACTTGAGTCATTACACA
Associated Phenotype:
Not determined