Busch Lab

ZMP

si:dkey-121a11.10

Ensembl ID:
ENSDARG00000071462
ZFIN ID:
ZDB-GENE-050208-475
Description:
Novel protein similar to vertebrate laminin, alpha 3 (LAMA3) [Source:UniProtKB/TrEMBL;Acc:Q1LXE7]
Human Orthologue:
LAMA3
Human Description:
laminin, alpha 3 [Source:HGNC Symbol;Acc:6483]
Mouse Orthologue:
Lama3
Mouse Description:
laminin, alpha 3 Gene [Source:MGI Symbol;Acc:MGI:99909]

Alleles

There are 15 alleles of this gene:

Allele Name Consequence Status Availability
sa24130 Essential Splice Site Available for shipment Available now
sa11864 Nonsense Available for shipment Available now
sa15223 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa24130
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062705 Essential Splice Site 160 1657 6 41
ENSDART00000126827 Essential Splice Site 165 1681 6 41
ENSDART00000130840 Essential Splice Site 179 1028 7 27
ENSDART00000135987 None None 1263 None 29
Genomic Location (Zv9):
Chromosome 22 (position 16619989)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16371747
GRCz11 22 16398017
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTATAGATTGTTATGAGGCTGATGACCCAGACACCGACAACTGCTTTGG[T/C]TTGTCATAACAGAAAAAAAACATGAATGTATGTATGGATGAACATTACTA
Long Flanking Sequence:
AAAGGTGTGATGCCAGCTTTTTTCTAAAGCAGAACTATATAGTTTAGTTTCAGGATGACTTTGTTGTTTATTTACTGAATATTTGTTTATTCATTTGTGCAGTTTTGCTGTTGGATGTCTCGGAGTTGGAGATGAGTTTGAATGTTTGTGTAAACCTGGCTACTCTGGAGTTCGATGTGAACGGTCTGTCTGCCTTTTGAAACATGGTCACATTTGGTTTCGATTGAATTAATGATTTAGGCAATTTAATTTAATTGAGTGTTTTCTCATTTACTCCACATTATAGGTGCGCGCTTGGATACTATGGCAGTCCTTTGGCAGAAAGAGGAAGTTGTCAACCATGTGACTGTGAACACGGTTACGTGTGTGACCCGTTAACAGGCGGTAAGCAAATTCTCATGATTTACATAATAATAGTAGTAATGATATTAATGAATCCATTTGTTTGTCTTTATAGATTGTTATGAGGCTGATGACCCAGACACCGACAACTGCTTTGG[T/C]TTGTCATAACAGAAAAAAAACATGAATGTATGTATGGATGAACATTACTATGATTGACTAACTCCAGTCTCTCTCCCATTAGACTGTGATATCTGTGTGGTTAAGTTAATGGATGATCTTGCAGCGATGGATGAGGAGTTTGCCAGACTGATTGATCAACTTGGGTCTTTTAGTCCGAATGCTACTTCATATACGGGACTTGAAAAACTTGAAGATGCCATTGCTGATACAAAGGTCCCTACAACAATTTTCCTAAACAATTATTTGGAATGGCTCTAATACACTGTTTATGTTTGTGCACAACTAAAAAAGAAATTCCACTTTCTTAGGTGTTGGTGCAGAAGTATACTGAATCTGTCTTCAAATTGAAACCAAAGATTTCAGAGCTTGAATCTCATCTCCAAAATGTCAAAGATGACCTAACTGCTCTCAATGACAAGGTACGATTACTATTCAGAAGGGTTTATCTTTATGTTGGCTGTAAAATAGATTTCAACTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11864
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062705 Nonsense 836 1657 20 41
ENSDART00000126827 Nonsense 844 1681 21 41
ENSDART00000130840 Nonsense 859 1028 22 27
ENSDART00000135987 Nonsense 806 1263 18 29
Genomic Location (Zv9):
Chromosome 22 (position 16612848)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16364606
GRCz11 22 16390876
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCACCAAGTCCAGCAATGATAAAGCCTTTATGGATAGGGTGGMTTTCCGC[A/T]GGTAAACAACGTYTTAGTCATTGTAGATCCCCTGTTCTGTCGATTTGTCC
Long Flanking Sequence:
ATTACTGTTAATATCAGCCAATCATCAGTTGGGTCAGTTTCAGCTATCAGTATTGCTAGCAGCTAGAATTGTAATATGTGTGCATATATTACACATATTCAAGCTGTATATTGTAGGACAGGGGTGTCCAAACTCGGTCCAGGAGGGCCAGTGTCTTGGAGAGTTTAGCTTCAACTCTAATCAAACACACCCGAACCAGCTAATCACGCTCTTTCTAGATATACTAAAAACGTCCTAGCATGTGTGTGGAAGCAAGTTGAAGCAAAACTCTGCAGGGCACCAGCCCTCCAGGACCGATTTTGGACACCCCTGTTGTAGGGCATCATTTTATTTGTAGTTCTTTTGACCAACAGGAAGTCAAGGATTTCATTGGCCTGGTTGTAAGGAATGGTGTTCTTTTTTGCCTCTACAAACTGGGTGGCCAACTTCATGAAATAGAGACGAGTGAAATCACCAAGTCCAGCAATGATAAAGCCTTTATGGATAGGGTGGATTTCCGC[A/T]GGTAAACAACGTCTTAGTCATTGTAGATCCCCTGTTCTGTCGATTTGTCCTACCTTGTCAGATTGTCCTACCACCTTCCATTCAAAAAGTATTCAGTAAATTTTGATGCTACAAATCAGATTTGGCTACCAGTGTAAATTTTAATGTGGAGTAGTGTGATATGAAGCTGTAATAACACCCTAACCTACCCAATCCCTAACCCCAATCTCAAAACCATTTAAATACAGTGTTGGTAGCATATTCTGAGGGGTGGGATAAAATGTCAGGACACCCCCAAAGAGTTCATTTGGTTTTCTGAAAAATATTTTTTTTTCTCCTAAATTAGAGTTTATCAAGATGCACAAGTCATATACACACATACTTTCACTTCAACTGAACCCAACGAGCTGCCAGCAAGGATAAATCAGCCTAAAACCATGAATGGATTGCTCGATCTGGACCCCAATGATGTCGTTCTTTATGTTGGAGGATACCCAAGGGATTTTACGGTAAACAAAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15223
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000062705 Nonsense 1434 1657 35 41
ENSDART00000126827 Nonsense 1457 1681 36 41
ENSDART00000130840 None None 1028 None 27
ENSDART00000135987 None None 1263 None 29
Genomic Location (Zv9):
Chromosome 22 (position 16607293)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16359050
GRCz11 22 16385320
KASP Assay ID:
2261-6652.1 (used for ordering genotyping assays)
KASP Sequence:
AGCCGTTGAAAGGATTCACGCAGGAWTTGCAGTCTCCTGTCTATRTGGGA[C/T]AACTTCAGACTCGTCACCAAACATATGTATGAATGYTTAACGCCCTTTTT
Long Flanking Sequence:
AGCAAAATGCAGTTTGAATTAGATCCAGAGGAGCTCAATAACAGGTAAATTATGTTCATGACGTTTATTCTTAATTTTGCAGCACCTTTATGAGACCTTCTGCATCCTATAGGCCCCATTTCTCTCTAGACGTCCAGACCACATCATCTGAAGGACTTTTACTCCATCTCTCAGGGAAACATGGTGTTCCTCTTGTGGTCTTGTATTTATATGAAGGAAAAGTCAAACTTTCTGTTGGGGAAGATGAAATAGTTTCCTCTCGGAGGATCAATGATGGTCAATGGCACAGTGTATGTAGCAAACTCATATATATCTTAACCCAAACATATATATCTGCATAATCCCAAGTTTTGGTTCATGTTTTTGAAATATTGTGTTAACAGATCCAGTTCACGGTGAAGAAAAGATCGTCTCATCTTGCTGTGGATGACCTTCGAACACTCAATGGACAGCCGTTGAAAGGATTCACGCAGGATTTGCAGTCTCCTGTCTATGTGGGA[C/T]AACTTCAGACTCGTCACCAAACATATGTATGAATGCTTAACGCCCTTTTTTCAGGACACAGGTAAACCTCAAGTTTTGTAAACCTCTAAAAAGGCTTTTTTCCTCAGAAAAATGTCCCTCAGAAGAGTATAATCGGATGCATTCGTGAGCTCAGAGTTTCCAAGCTTCTCCTCATGAATCCAGCTGTCAATCAGGGAGCCACGCCCTGTTTTAAAGGCCGGACTGAGAAAGGGGCGTATTTTGCTGGAAATGGTGCACATTTAGTCTTAGGTATGGCTCTTCATTTTGGTACATTAGAGAATAGAGACAGAAAAATATGCTGAAGGAATTAAGAAATCTTTTTTTTTAACAGAAAAGTACTTTATCTCTGGTTCTACGTATGATTTAACTTTTGAACTTCGGCCAAGAAACCTCACCGGCCTCATCTTCCACAAAAGAGACAACCTTGGACAGACTGTCACACTATTTCTCAAGAAAGGAAAGGTGAGTGAAAATATGGT
Associated Phenotype:
Not determined