ZMP

zgc:153948

Ensembl ID:

ENSDARG00000070951

ZFIN ID:

ZDB-GENE-061013-204

Description:

high mobility group AT-hook 1-like [Source:RefSeq peptide;Acc:NP_001070744]

Human Orthologue:

HMGA1

Human Description:

high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:5010]

Mouse Orthologues:

Hmga1, Hmga1-rs1

Mouse Descriptions:

high mobility group AT-hook 1 Gene [Source:MGI Symbol;Acc:MGI:96160]
high mobility group AT-hook I, related sequence 1 Pseudogene [Source:MGI Symbol;Acc:MGI:96161]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa7053	Nonsense	Mutation detected in F1 DNA	Not yet available
sa12236	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa7053

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000104603	Nonsense	7	92	1	4

Genomic Location (Zv9):

Chromosome 6 (position 54098084)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	54134818
GRCz11	6	54142926

KASP Assay ID:

554-5080.1 (used for ordering genotyping assays)

KASP Sequence:

TTGATTCCACGTGTTTTGAACAGACTGCAATCATGAGTGATTCAGAAAAA[C/T]AAACCGTCTCCCTTAAGGACAAGGATGGAGTAGAGAAAAGAGGACGAGGA

Long Flanking Sequence:

AACATCGTGCGGGAGGTGGAGCCGCCGAACAGAGCAGCGCGCGCACCACGACATTATTATTCCTCTTAAGTGCATGTAAGTCAATGTTTCGTCCTGTGTTAAATGAATGCACGAGGGCTGTAATGCTCGTTTGCACGTCCGCCTTTAAAGCGGAGCTCACGCTGTATGGCTTCCATACAGATTTGTCGTTGCATAACCTATTGAGCGCCTCGCCTGCATGATCAACATCAGAGTGATTCAGATGGGTTACCGGCGTGAATTTGCCAATTGTACAACTTTGAAACTTGATTATGCATTATTTTGATGTCTTTCATTGTTTTAAAGTGTATTAAACTTCACTTATTAGCATTGCATTTGTGGTTTTAGGGATGTGTTTATAATCATGAGCTATTAAATTTATGCTTGAGTTGCAAGTCAGCACAAATATTAAATATTGCATATTATATTTAATTGATTCCACGTGTTTTGAACAGACTGCAATCATGAGTGATTCAGAAAAA[C/T]AAACCGTCTCCCTTAAGGACAAGGATGGAGTAGAGAAAAGAGGACGAGGAAGACCAAGGAAGCATCCTAAGGTATATAAAACAATTGCATTATCTGTTAACAGATATATTGATCAATGAGCAAACATAATGCAATCAGTTTAATGCATAAAAATACGCACCCTCAGTTTAGTATAACATTACAGAGGGAACATCTTAAAAGGATAGTTCACCCAAAAAATAATATTGTTTCACTTTTTTATTTCCTTTTAAAAGCTATATGAGTCTCTTTCTTCTGTTAAACACAAATGACAACATTTTAAAGAAAGCTGGAAACCAGTAACCATTGACTTCTATAGAAAAAAAAAACAATGGAAGTCAATGGTTACAGGTTTCAAGCTTCCCTTAAAACACATTTCTTTGTGTTCAACTGAAGAAAGAAACTCATATAAGGGAAAGGAGAGTAAATGAAGACAGCATTTTCCTTTTTGGGTGAACTGTCCCTTTAATAAACATGTTTTC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa12236

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000104603	Nonsense	12	92	1	4

Genomic Location (Zv9):

Chromosome 6 (position 54098099)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	54134833
GRCz11	6	54142941

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTGAACAGACTGCAATCATGAGTGATTCAGAAAAAYAAACYGTCTCCCTT[A/T]AGGACAAGGATGGAGTAGAGAAAAGAGGACGAGGAAGACCAAGGAAGCAT

Long Flanking Sequence:

GTGGAGCCGCCGAACAGAGCAGCGCGCGCACCACGACATTATTATTCCTCTTAAGTGCATGTAAGTCAATGTTTCGTCCTGTGTTAAATGAATGCACGAGGGCTGTAATGCTCGTTTGCACGTCCGCCTTTAAAGCGGAGCTCACGCTGTATGGCTTCCATACAGATTTGTCGTTGCATAACCTATTGAGCGCCTCGCCTGCATGATCAACATCAGAGTGATTCAGATGGGTTACCGGCGTGAATTTGCCAATTGTACAACTTTGAAACTTGATTATGCATTATTTTGATGTCTTTCATTGTTTTAAAGTGTATTAAACTTCACTTATTAGCATTGCATTTGTGGTTTTAGGGATGTGTTTATAATCATGAGCTATTAAATTTATGCTTGAGTTGCAAGTCAGCACAAATATTAAATATTGCATATTATATTTAATTGATTCCACGTGTTTTGAACAGACTGCAATCATGAGTGATTCAGAAAAACAAACCGTCTCCCTT[A/T]AGGACAAGGATGGAGTAGAGAAAAGAGGACGAGGAAGACCAAGGAAGCATCCTAAGGTATATAAAACAATTGCATTATCTGTTAACAGATATATTGATCAATGAGCAAACATAATGCAATCAGTTTAATGCATAAAAATACGCACCCTCAGTTTAGTATAACATTACAGAGGGAACATCTTAAAAGGATAGTTCACCCAAAAAATAATATTGTTTCACTTTTTTATTTCCTTTTAAAAGCTATATGAGTCTCTTTCTTCTGTTAAACACAAATGACAACATTTTAAAGAAAGCTGGAAACCAGTAACCATTGACTTCTATAGAAAAAAAAAACAATGGAAGTCAATGGTTACAGGTTTCAAGCTTCCCTTAAAACACATTTCTTTGTGTTCAACTGAAGAAAGAAACTCATATAAGGGAAAGGAGAGTAAATGAAGACAGCATTTTCCTTTTTGGGTGAACTGTCCCTTTAATAAACATGTTTTCTTTCAGGAATCCAGT

Associated Phenotype:

Not determined