Busch Lab

ZMP

si:ch211-194b7.4

Ensembl ID:
ENSDARG00000070455
ZFIN ID:
ZDB-GENE-100922-188
Human Orthologue:
C9orf5
Human Description:
chromosome 9 open reading frame 5 [Source:HGNC Symbol;Acc:1363]
Mouse Orthologue:
D730040F13Rik
Mouse Description:
RIKEN cDNA D730040F13 gene Gene [Source:MGI Symbol;Acc:MGI:2445107]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa22856 Essential Splice Site Available for shipment Available now
sa17756 Essential Splice Site Available for shipment Available now
sa36155 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa22856
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103407 Essential Splice Site 174 605 2 13
ENSDART00000147438 None None 432 None 11
Genomic Location (Zv9):
Chromosome 16 (position 29399438)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 27275122
GRCz11 16 27148597
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGACCGATCAAAGGCCTGACACATTTCTTGCTTCGCGTGGACACTAAGG[T/A]AATGCCTTATGTAGACAAACCCACACAAAAGTGCTCGCCTGTCTGCTGAC
Long Flanking Sequence:
TTCCATACTACTGTCATTTCGCTAACAATTATTTCAACCCTTCTTCGCCTCACAGACTCTATAGACACCCCGAAGGGTCTCTTCAACATTCCCTCATCCCGACGACGTAGCAGACTAGAATTCAGGGGTTTCCAGCCGAAACAGAAGACCAGCGATATCTACTTTGTGCTGCTGGCCTGGGCGATAGTGCTGGTGCAGATCTGGCTCAACCTCTGGCTCTTACAGTTACTGCCCATCCCTGTTGCTGGTAAACTTGGTGTTCATGATCCTGAGGTCACAAGTTTAGGTCCACAGTTCATGATTTCATGAGTGAGTGTTTTATTTTCCAGTTTGGGTCTTGAAAAAGGCGGTTGTCCGTTTTGGGATGAAGGACTTCATCGGGCGAACTCTAGCCCAGTGGTGGACGGTATCCGAGAAGTTCGTCAAAGACAGAGAGGATGCTCTTCTGCCTGGACCGATCAAAGGCCTGACACATTTCTTGCTTCGCGTGGACACTAAGG[T/A]AATGCCTTATGTAGACAAACCCACACAAAAGTGCTCGCCTGTCTGCTGACCCACTGTCCTTCACAACACTTGCCTGTTGCCACATGCGCACATTTATTTTTGGATGCGACAGAAGTCTGTGGTTAAAAAGAAGAACTGAATGTGGTTGTGGCTTGCTGATTCTCTATTTCTCTTACACCACTAAGGCAAAAAACATCCATAACTGACCGAATAAATGCTGTGGAGCTTAGATGGGAATGTTTCTGTTTATATCACGACTTTAAAAGCATGTGGGAAAAATTTATTATTTAGCAGATTTCTTTTTCCATGAGTGAGTTAAATTGTAAGAACATAATATAAGCTACTTCCTCTATCATATCAGCTCAAGGGCTCTGATAAAATCTGAATGTAGCTTTTTTTGTCTTTGCACATAGCTAGCAGTTATCATTCTGCTGTTTGAGGTTTATGACATGAGGAAGTCAACTCGATGTTCTTAAAAATGTGCTAGCAGTTTCTCAGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17756
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103407 Essential Splice Site 300 605 6 13
ENSDART00000147438 Essential Splice Site 127 432 4 11
Genomic Location (Zv9):
Chromosome 16 (position 29387269)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 27263043
GRCz11 16 27136485
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AYAAGTTTTGGAGCTGTGGGACCGTCTTTATCAGTCTTGGATTGTGAAGG[T/A]AATTAAAAAANCTCAGCTGCACACAATCCATGTCTTGTAAAAGTTTTTTTT
Long Flanking Sequence:
AATGTATAATTTGTTAGGATAGCACAATATTTGGCTGTGATAAAAAAATGAAAATTAACATTTAAAAACATTGAAATACTGAGAAAATAATATTTAAATTGTCTAAATGAAGTGCTTAGCAATACATATTATGATTTAAAAATTAAAATTTGGTGTGTTTACTGTAGGAAATTGACATGTCTCCATGAAACATGACCTTTGCTTATTATTCTAATGATTTTTGCCATAAAAGTAAAAGCAATCATTTTGACTCTTACATTGTATTTATGGCTGTTGCCACATATATACCCATGCAACATAAGACTGGTTTTGTGGTCCATGTCACATTTATAAATGCAGAGATTTGATGTGAGAAGTTGAATAATGTAATCATTTATGTTTGTGTGTGTGTGCATTATAGCTTCATAAGATATTGGGTGATAAAGTAAACAACACAGCTGTGATTGAGAAACAAGTTTTGGAGCTGTGGGACCGTCTTTATCAGTCTTGGATTGTGAAGG[T/A]AATTAAAAAACTCAGCTGCACACAATCCATGTCTTGTAAAAGTTTTTTTTTTTATTTCAGTCTGTGTTTTTGTATTGTAGAACGTGACTCACACTGGACGACTCCGTGGACACAAGCTACATATGCACAGGCAGAACAGCTGGCTGGGAGACATACTGGACTGGCAGGACATCGCCTCATTCCTGCAGGAGAATATTGAGACACTGCTTTCGGTTAGTGTTGTGGGTGTGTGTTTGTGAGTTTGCTGGGTTTTTAACTGACAGACTGATGAATATGTATTTTCTCCGCTAGATATTGGAGTCTCTGTGGGTGGTGATGAGTCGAAATGTTGGTTTACTGATATCCACAACAACAACGCTGCTTACCGTACTATTCCACAGCGGCACCGCACTGCTCAACTTTGCCCTGTCTTTGGTAACACACACACATACACACGCACACACAAACAATCAGACTGATGTAATTACATTTTGAGGGCTGATTTTGATTATGGTTGCTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36155
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000103407 Nonsense 401 605 9 13
ENSDART00000147438 Nonsense 228 432 7 11
Genomic Location (Zv9):
Chromosome 16 (position 29385954)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 27261728
GRCz11 16 27135170
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATAGGTGATTTTCCTGACCACACTTTTTTACCTGCTGAGCTCCAGTGGT[G/T]AATACTATAAACCTGTGAAATGGGTTATCAGCCTCACTCCCCTCTCCCAA
Long Flanking Sequence:
TATGGTAATTCATGCTAAAAACAAGCTAACAGCATGCTAATTCATCTTATTAGCATTAAATCATTGTGGGAATGTGTTCATTTGTTAGAACATGCTAAAAACATGTTTATTCATGCTAAAAATATGCCAGGAAACATTCATTCATGCTAGTAACATGCTAATTCATGGTAAAACATACTAACAACTTGCTAATTCATGTCAAAACATGCTTAACTATGTTTCTAATGCTAGACACCTGTTTGCTAGCGGCATTCTAAGTTATTTAGAAACGTATAGTAATCGATGCCAGCTATTCTAGAAACATGCTAATTCATGCTATCATACTGGAAACATGTTAGCAATGTCAACTCATGCTTGCAACATGCTAATTCATGTGGCTTTGTCCAGCCAACATCATCAACGTTTGTCAACAAACTTCACTCATCTAGTTACTCATTGTTTCTCTGGACATATAGGTGATTTTCCTGACCACACTTTTTTACCTGCTGAGCTCCAGTGGT[G/T]AATACTATAAACCTGTGAAATGGGTTATCAGCCTCACTCCCCTCTCCCAACCTGGACCCTCTTCAAACATAATCGGCCAGTCTGTGGAAGAGGCCATCAGGTACACATGTGCACAGGGACCAATGCTTTGTCTTACAAAGGTGGTTCTAAAAAACTTAACTCAAAAGACAAATAGCTATAGACACATCGATTTTTAGAAACGGGCAAACTGTCCTTTGCCTGGGCAAAATGCTTGCACTGCTGCACTCCATTACACAAAGCTTTGTTTGTTTTTTAAGATATTTCAAAAAGATTTAAAAGGCACATTCTGGTCTGCCTTGTCAATGGCCGAAAGATGGAAGTAGTGAAACATTCGATAGTTGACAGCTGTTTCACCATAAAAATATTCATTATTTCAGTTAAATCCAGTGACAGAAACCTTTTTTTCTCAAAATGCCTGTTTTAAATTTAAAACGATACGTTTTAAATTAATCAATTCTACATTTTGCCGTTGTAGATGG
Associated Phenotype:
Not determined