Busch Lab

ZMP

phf10

Ensembl ID:
ENSDARG00000070084
ZFIN ID:
ZDB-GENE-040426-1573
Description:
PHD finger protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q6NWE1]
Human Orthologue:
PHF10
Human Description:
PHD finger protein 10 [Source:HGNC Symbol;Acc:18250]
Mouse Orthologue:
Phf10
Mouse Description:
PHD finger protein 10 Gene [Source:MGI Symbol;Acc:MGI:1919307]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa1287 Essential Splice Site F2 line generated Not yet available
sa42132 Nonsense Mutation detected in F1 DNA Not yet available
sa5857 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa1287
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102563 Essential Splice Site 23 490 1 12
ENSDART00000121598 Essential Splice Site 23 369 1 9
Genomic Location (Zv9):
Chromosome 13 (position 5655961)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 5850419
GRCz11 13 5978896
KASP Assay ID:
554-1202.1 (used for ordering genotyping assays)
KASP Sequence:
CGAGACCGTGCGATAGCAAYCCTGCRACTCCTGGGACCCAGTCTATAARG[G/A]TTTGTGATGTTTACTTACTACTTTTTCTTAGCAGAAGCTGYAGATATATC
Long Flanking Sequence:
TCAACAAAGTGCTTCTAGCACTCAAACAGCAGCGCAGGGTTTCACTTCCTGTTCCAGACAGTTGCGCGAGAAGACAAGCCTGTTTTTTTTACACAAGCCCCGCCTCCTACGCTGTTTTTTTTTTATAATTGACAAATTTTATTAAATAAAAAAACATTTAAAATGTCTTATCAATTAATTAAAAATAAAAATAATAAAAATAATAAATTTTTAAATTTAATACAAAACATAATTTTAAAATAAATGTAAAACATTTTAAATAGTTTGTAATTAAAATAAACCTTGTCCCAAAAAGTTACCAAAATAGACGTGCAATTAAATAATATTTAGTTTTCAATTTTTTGTTTTTAGAGATAGGAACACTTTGTCGCGTTCCCATTGTGCTAGTTTCCAGCCGGAATGTGACGCCCTTTCATTCGCAGAATAACAACATGGCAGCTGTTCTATCGCCGAGACCGTGCGATAGCAATCCTGCAACTCCTGGGACCCAGTCTATAAAG[G/A]TTTGTGATGTTTACTTACTACTTTTTCTTAGCAGAAGCTGCAGATATATCACTCTAGCAATGTAAAACTGTACTTACACCTGTACAGTTTCAGCGTGAGTGTGACGTACATTCGCCTTTGTTTGTTTACCATTAGCCTGTTAACGTTAGCCGAGGTAGCTGAACAGGCCATGCATTTCGAGTAATATTTCGTAAATTGATTAACACAGAAAAGTGGACCCGCAATGACTTATCTAGATGGTTTTGAACAGTCGTTTTTAGTTTATTGGCATGGTATAAACAATCACTGGCCACTTTATTAGGTACACCTTATTTGTACCTGGTTGGACCCCCTTATGCCTTCAGAACTGCCTTAATCCTTCGTGGCATAAATTCAACAAGGTACTGGAAATATTCCTCAGAAATTTTAGTTAATGTTGACATGATAGCATCACACAGTTGCTGCACATTTGTCAGCTGCTTATCCATGATGTGAATTTCCCGTTCCACCACATCCCAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42132
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102563 Nonsense 82 490 3 12
ENSDART00000121598 Nonsense 82 369 3 9
Genomic Location (Zv9):
Chromosome 13 (position 5659112)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 5853570
GRCz11 13 5982047
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAAACCTGACAGAATACAAATGGCCTCCGGATGACACGGGAGAGTATTA[T/A]ATGTTACAAGAACAAGTGAGCGAGTACTTGGGAGTCACGTCATTCAAGCG
Long Flanking Sequence:
AATAGCATTTGTTTATATCTAATCTAGATATAGTCTAATCTAATAGTCAAAGCTGAAAACGTTTTCTTGTTTCCAAATGGTTTAAATGAAACCTCAACTTGAAATCTCTTGACTATCCTGCGATTTGCAATAGTCATATTCACACATTGCGAAAGCGATGCTGAAATTATGTATTGTGCAGTCCTAGTTTAAAATAATAATAACTTAAATAATTAGTTTTCCCATAACATTTAAGCATTTTGCAATAGTTTACATTAATAGTATAATTGGTTTATCATAAATGATACATGATTTGTTTTTGTTGTATACGTTTTTTATTGCACTTTAAGGAAAAATAATGGAAAATTCTTATATTGCACATGCAATTCTGGACTGAGAATGTGTGTATGTGATTGTATGTGTGTGTTTTGACCTTTGCTGTTTCATTACAGACCAACATACTTCCCTGCTGAAAACCTGACAGAATACAAATGGCCTCCGGATGACACGGGAGAGTATTA[T/A]ATGTTACAAGAACAAGTGAGCGAGTACTTGGGAGTCACGTCATTCAAGCGCAAATACCCAGGTATGAGTGAAATTGCACTGAGGAATTTGTATGTGCTTGGTCAAATGGGTTTCATTTCCAGATTAAATTATGAAGAGAAGATTTGTTGTGTGGTGTAAACATGTCTTTTTTTCATTCTATTCCACTTCATGTACTAGAAATGGAAAGAAGAGACCTGTCTCACAAGGAAAAACTTTATCTGAGAGAGCAGAATGTCATTACTGAAACACAGTGTACATTGGGTAAGATGTTCATAATCATAGTTTTGCTTCTTGTTCAGCCTACTTATTTAGAATGAGCTGAAACAACACAATTCTGGAGGTTTTTTTACTTACTTGTTTTATGTTCAATCTACTTAAATTTGTATTGTTAACTTAATGGGACGACATGAAATAATTGTGTGGAACCCAGGATTTTTTACAGTCCAAGACTAAACTGAAGTTGAATTTTTCCACAGGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5857
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102563 Nonsense 100 490 3 12
ENSDART00000121598 Nonsense 100 369 3 9
Genomic Location (Zv9):
Chromosome 13 (position 5659164)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 5853622
GRCz11 13 5982099
KASP Assay ID:
554-3771.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTACAAGAACAAGTGAGCGAGTACTTGGGAGTCACGTCATTCAAGCGC[A/T]AATACCCAGGTATGWGTGAAATTGCRCTRAGGAATTTGTATGTGCTTGGT
Long Flanking Sequence:
CTGAAAACGTTTTCTTGTTTCCAAATGGTTTAAATGAAACCTCAACTTGAAATCTCTTGACTATCCTGCGATTTGCAATAGTCATATTCACACATTGCGAAAGCGATGCTGAAATTATGTATTGTGCAGTCCTAGTTTAAAATAATAATAACTTAAATAATTAGTTTTCCCATAACATTTAAGCATTTTGCAATAGTTTACATTAATAGTATAATTGGTTTATCATAAATGATACATGATTTGTTTTTGTTGTATACGTTTTTTATTGCACTTTAAGGAAAAATAATGGAAAATTCTTATATTGCACATGCAATTCTGGACTGAGAATGTGTGTATGTGATTGTATGTGTGTGTTTTGACCTTTGCTGTTTCATTACAGACCAACATACTTCCCTGCTGAAAACCTGACAGAATACAAATGGCCTCCGGATGACACGGGAGAGTATTATATGTTACAAGAACAAGTGAGCGAGTACTTGGGAGTCACGTCATTCAAGCGC[A/T]AATACCCAGGTATGAGTGAAATTGCACTGAGGAATTTGTATGTGCTTGGTCAAATGGGTTTCATTTCCAGATTAAATTATGAAGAGAAGATTTGTTGTGTGGTGTAAACATGTCTTTTTTTCATTCTATTCCACTTCATGTACTAGAAATGGAAAGAAGAGACCTGTCTCACAAGGAAAAACTTTATCTGAGAGAGCAGAATGTCATTACTGAAACACAGTGTACATTGGGTAAGATGTTCATAATCATAGTTTTGCTTCTTGTTCAGCCTACTTATTTAGAATGAGCTGAAACAACACAATTCTGGAGGTTTTTTTACTTACTTGTTTTATGTTCAATCTACTTAAATTTGTATTGTTAACTTAATGGGACGACATGAAATAATTGTGTGGAACCCAGGATTTTTTACAGTCCAAGACTAAACTGAAGTTGAATTTTTCCACAGGTCTCACAGCTCTGCGCAGTGATGAAGTTATCGATTTAATGATTAAAGAGTATCC
Associated Phenotype:
Not determined