Busch Lab

ZMP

rcn1

Ensembl ID:
ENSDARG00000070006
ZFIN ID:
ZDB-GENE-080225-33
Human Orthologue:
RCN1
Human Description:
reticulocalbin 1, EF-hand calcium binding domain [Source:HGNC Symbol;Acc:9934]
Mouse Orthologue:
Rcn1
Mouse Description:
reticulocalbin 1 Gene [Source:MGI Symbol;Acc:MGI:104559]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa25356 Nonsense Mutation detected in F1 DNA Not yet available
sa45271 Nonsense Mutation detected in F1 DNA Not yet available
sa20882 Nonsense Available for shipment Available now
sa1699 Essential Splice Site F2 line generated Not yet available
sa20881 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa25356
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102363 Nonsense 124 328 2 6
Genomic Location (Zv9):
Chromosome 7 (position 16595617)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 15578315
GRCz11 7 15826201
KASP Assay ID:
554-7505.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCAGAAGCGCTACGTTTATGAGAACGTTGCAAAAGTCTGGACTGACTA[T/A]GACCTGAACAAAGACAACAAGATCTCTTGGGATGAATACAAGCAGGCGAC
Long Flanking Sequence:
GCAGGATATGGTGTAAATAAATACACTAAAGACATCTTAAAATAAATTGTTACCCTTATTTTCTTTCATTCTTGACTTGACAAAACATAAAAAGCCAAATCATAATATAATTCTTATTTGAAATTAATAATACACATTTATTATCTAATCGTGACTAGATCAAATAACCAAAATAAGATGGTAATTTTTACATAAATAAGTAATTACGACAGGCCTGTTGTGCAATATACTCTGGCCATGTTTTCAAAGGATCCACCCTGTCTGAGCTGAAAAGCCGGAGATTTCTATGAAAACCTCATTCAAAGTGTGTTCTGAGCAAGTTGAATTGTATTAACTCTTTCAATTCTATGCATTTTTTTTTTTAAATGTCTTAGGAAAATTGTTGAGCGTATCGACAGCAATGTTGATGGATTTATCACCACTGATGAACTCAAAGCCTGGATCAAAAGAGTTCAGAAGCGCTACGTTTATGAGAACGTTGCAAAAGTCTGGACTGACTA[T/A]GACCTGAACAAAGACAACAAGATCTCTTGGGATGAATACAAGCAGGCGACTTACGGTTACTACCTCGGTAAGACAAGCTGTATCTGAAACCGTCAATTTAGATATTTCAGGTTTGAAGTTTGATATTCATCCAGTGTTTATATGAGATTCATTGTGTCCTTTTTTCCCAGCCAACCCAGAGGAGTTTGAAGATGCTACAGATCAGTTTAGCTTCAAGAAGATGCTTCCACGAGATGAACGCAGGTTTAAAACCGCAGACCTCGATGGCAATTTGGCTGCAGACAAAGAGGAGTTCACTGCTTTCCTCCACCCAGAGGAGTTCGCTCACATGCAGGAAATTGTGGTTCTTGTGAGTATGTTTATGATTATGGTGTTGTAGACAGTGGTAGTTACTGTCAGTTTAATTATGAAGACTACTTAAAACAACCATCATGATATTTCTAGAAATAATATAGATCTGTCTCCTCTGCTTTACCAGGAAACTCTGGAAGACATTGACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45271
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102363 Nonsense 225 328 4 6
Genomic Location (Zv9):
Chromosome 7 (position 16595082)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 15577780
GRCz11 7 15825666
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGAAGACATTGACAAAAATGGCGATGGTCATGTCGATGAAGATGAATA[C/A]ATTGGTAGGTGCTGATGTATTTTTGTGTGACCAATAGAATGCACCATAAA
Long Flanking Sequence:
AATACAAGCAGGCGACTTACGGTTACTACCTCGGTAAGACAAGCTGTATCTGAAACCGTCAATTTAGATATTTCAGGTTTGAAGTTTGATATTCATCCAGTGTTTATATGAGATTCATTGTGTCCTTTTTTCCCAGCCAACCCAGAGGAGTTTGAAGATGCTACAGATCAGTTTAGCTTCAAGAAGATGCTTCCACGAGATGAACGCAGGTTTAAAACCGCAGACCTCGATGGCAATTTGGCTGCAGACAAAGAGGAGTTCACTGCTTTCCTCCACCCAGAGGAGTTCGCTCACATGCAGGAAATTGTGGTTCTTGTGAGTATGTTTATGATTATGGTGTTGTAGACAGTGGTAGTTACTGTCAGTTTAATTATGAAGACTACTTAAAACAACCATCATGATATTTCTAGAAATAATATAGATCTGTCTCCTCTGCTTTACCAGGAAACTCTGGAAGACATTGACAAAAATGGCGATGGTCATGTCGATGAAGATGAATA[C/A]ATTGGTAGGTGCTGATGTATTTTTGTGTGACCAATAGAATGCACCATAAAAATTTGGTGTGGTTTGCGTTCAAGCTGCCATTTTTGCTAGTGAACTAGAAACAAAAGCACCCATGTGCTAAAGTCAAACGTTAATTGGATAGAAATGCTTGCAATCCTGTGGTGTATGCCGTAGGGTTTCACGTTTTACTGGTATTACTGTGATACTATGGCTTCAAAATACTGGCCATGCCATTGTAGTTTTTAAACAGTAATATTCTCATTAATGGTAGCGTCAACGGTAGGGGTGTCAAAATTAATCGTTTCTTCGGTGCACTGCGATGCAGACGTGGACGATTCGGTATCGGTTCAGTAATAATCATAACCTGTTTTTACTGACGTCATTTACCTCATATGCGCTCTGTCGCGAGGGAGGCGATCACGAGTATTTACAGTGCTTAAACTACTTAAAACTCATAAACTGTGCATAATTTCACTGTGTGTGTTTGCTGGATCAGTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20882
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102363 Nonsense 273 328 5 6
Genomic Location (Zv9):
Chromosome 7 (position 16592575)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 15575273
GRCz11 7 15823159
KASP Assay ID:
2259-8550.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAAAGATGGGAAGATGGACCTAGAAGAGATTCGTCACTGGATCCTGCCA[C/T]AGGACTATGATCACGCACAGGCAGAAGCCAGACATCTGGTGTACGAGTCA
Long Flanking Sequence:
CAAACTACGGGATATTCTTGCAGATTAACGCAGAAGTTTATCATAGGAATTTTATCGACCCATTTTTCCACAGTTGGCATTAAGGAACAAATAAACACTCTCTGACTAACAAGCAGCAGCTAAATGTGTCTGGAAAATGATTCAAAGGGCTTTTATTTTCATAAACGGTGCAGATATAAATGTCATCCATATAAGCATGTTCTGATTGGCCGGAGTAGACATCGAACGAATTTACAGGGATTTTCTAAAAGGGCCTGTTCACATGATCTCATTCTGAAAAATTGATGGTAATTGTTCTAAAAAGTCTGCATGTGTGAAAGCGGCTTATAACTCCAAGTAAAAACATTTTTCTATTGTTTTCAGCGGACATGTTTGCACATGAAGATGCTGGTCCAGAGCCAGACTGGGTAAGGACTGAGAGAGACCAATTTTCAGATTTCAGAGATCTGAACAAAGATGGGAAGATGGACCTAGAAGAGATTCGTCACTGGATCCTGCCA[C/T]AGGACTATGATCACGCACAGGCAGAAGCCAGACATCTGGTGTACGAGTCAGACACAGACAAAGTAAGAACGGGCTAGGATACTGTTAAGAATGGTTTCCAAAACAACCTTGTAGGATGTAACGATTCACAATAATAATCTCACGATTTAGTGACGTTATTTATACAAAATTATCTGACATTTAGGGTGAACACAAAAGCCCTTTAATTTTTTTTCTAAAATGCTGCACAATTTTTACAAAATAAAATCTTTTCTGCAGTACCTCAAAAAAATTCTTTAATATGAACAAACTAAAACTTTTGACTGTGCAGTTACATTACAAATTTAAAAAGAATTCCAAATAAAAAATAAACAATACAAATTAAAGAAGGCACTTTTAATTTAAATTTTTTTTATTAATAAATATGCGTAAACTAATTACTGAAATATGCGGAAACTAAATTTAAAAAGAAAGGGTAAAAAAGAAATCTGAAATGTATTCATACTTTCGCTATGAAAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1699
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102363 Essential Splice Site 293 328 5 6
Genomic Location (Zv9):
Chromosome 7 (position 16592511)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 15575209
GRCz11 7 15823095
KASP Assay ID:
554-1645.1 (used for ordering genotyping assays)
KASP Sequence:
CGCACAGGCAGAAGCCAGACATCTGGTGTACGAGTCAGACACAGACAAAG[T/A]AAGAACGGGCTAGGATACTGTTAAGAATGGTTTCYAAAACAACCTTGTAG
Long Flanking Sequence:
TTTCCACAGTTGGCATTAAGGAACAAATAAACACTCTCTGACTAACAAGCAGCAGCTAAATGTGTCTGGAAAATGATTCAAAGGGCTTTTATTTTCATAAACGGTGCAGATATAAATGTCATCCATATAAGCATGTTCTGATTGGCCGGAGTAGACATCGAACGAATTTACAGGGATTTTCTAAAAGGGCCTGTTCACATGATCTCATTCTGAAAAATTGATGGTAATTGTTCTAAAAAGTCTGCATGTGTGAAAGCGGCTTATAACTCCAAGTAAAAACATTTTTCTATTGTTTTCAGCGGACATGTTTGCACATGAAGATGCTGGTCCAGAGCCAGACTGGGTAAGGACTGAGAGAGACCAATTTTCAGATTTCAGAGATCTGAACAAAGATGGGAAGATGGACCTAGAAGAGATTCGTCACTGGATCCTGCCACAGGACTATGATCACGCACAGGCAGAAGCCAGACATCTGGTGTACGAGTCAGACACAGACAAAG[T/A]AAGAACGGGCTAGGATACTGTTAAGAATGGTTTCCAAAACAACCTTGTAGGATGTAACGATTCACAATAATAATCTCACGATTTAGTGACGTTATTTATACAAAATTATCTGACATTTAGGGTGAACACAAAAGCCCTTTAATTTTTTTTCTAAAATGCTGCACAATTTTTACAAAATAAAATCTTTTCTGCAGTACCTCAAAAAAATTCTTTAATATGAACAAACTAAAACTTTTGACTGTGCAGTTACATTACAAATTTAAAAAGAATTCCAAATAAAAAATAAACAATACAAATTAAAGAAGGCACTTTTAATTTAAATTTTTTTTATTAATAAATATGCGTAAACTAATTACTGAAATATGCGGAAACTAAATTTAAAAAGAAAGGGTAAAAAAGAAATCTGAAATGTATTCATACTTTCGCTATGAAAACACTAGCTATGTTTCCGTTTTAAAATGCAAATTAATTTTATGCGCAAAACTAGATTATCGCATAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20881
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102363 Nonsense 317 328 6 6
Genomic Location (Zv9):
Chromosome 7 (position 16589048)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 15571746
GRCz11 7 15819632
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATACTTGAGAACTGGAACATGTTTGTTGGCAGCCAAGCCACCAACTA[C/A]GGTGAAGACCTTACCAGGAACCACGATGAGCTCTGAGCCCAACTGACCTC
Long Flanking Sequence:
ATTCATTCAACATTTGCACCGTTTTGAATCGTCACAATGTTGTGAGCAGTGTTTCAGCATAGAAGAGCGATTTCTACAAGTTTATGCAAGACTGAAGGCTAGAGTGTTGATGCAAAAAAATAGTATTGCATACTAGTGTTGTTTATGAAGTTTAGACAACTGTATTGTTTTCAAACATGTGCAATTTGAAATATATTTTCCAAAAGTATATTTTTTAAGGCCATTGCAAATTAACAAATGCATAAAGAGAGAGTTTTTTAGCCGACAGTTATTAGCCAAAGTGTTCTGTAAATGCCCTCTGAAATAGTACCTTTACTGAAATACGATTGTTTTACCAGCAATATCAAGCAATAAAAGATTGTTAAATTGAAGTGGCTGATGGTTGAGAAACATGCACACTTTTCATGACGGCTGTTCGTGTTTTTGTAGGACCAGATGTTGAGCAAAGAGGAGATACTTGAGAACTGGAACATGTTTGTTGGCAGCCAAGCCACCAACTA[C/A]GGTGAAGACCTTACCAGGAACCACGATGAGCTCTGAGCCCAACTGACCTCTACCTGAAAACACAGGTATCCGAAACTCAAACTCCATGGCATCCTTCCTTTCAGAAGCCATGCAACTGACTGATGAACTGCAGCTCTACCTCACAGACTGGACATAGAGGACCACTGACTGATGGCCATAGTCCTGATACAATACAAGGAGATTCTCCTTCGCTCTATGTTCGTTTTGTGGGTGCTCAAGAAACTCTTGAGAGTCTGCTTGAGCTGCTACAGATTTCTGAGCCTTTCATCTCCAACGTGTTTCATTTTTAAATCGGTCCTAGTCCAAAGCTTGTACCTGTACAAGCAGTGCAGGTTTTTGTCTGATCAAATAGTCTATTTATTTGGAATTTGAATTGAATTTCTTGCTTTGAAATTACAATGCTTTTACTCCCTCAAACACAAGTCACTTCAAACACTACAAGTGTTGATAAACATAACATGAATACATGAATGTGTAAT
Associated Phenotype:
Not determined