Busch Lab

ZMP

si:dkey-27b3.6

Ensembl ID:
ENSDARG00000069390
ZFIN ID:
ZDB-GENE-091204-22
Human Orthologue:
ITGA2
Human Description:
integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) [Source:HGNC Symbol;Acc:6137]
Mouse Orthologue:
Itga2
Mouse Description:
integrin alpha 2 Gene [Source:MGI Symbol;Acc:MGI:96600]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa34850 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

This allele has been removed from public view.

Allele Name:
sa27561
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000100947 Nonsense 216 293 6 9
ENSDART00000140894 None None 254 None 7
Genomic Location (Zv9):
Chromosome 10 (position 8947993)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 9023949
GRCz11 10 8857508
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGATCAAAATAAGCAGAAAGTTCTTTTAGCGGCTTCTGATATTGACCAA[C/T]AAACTGGTCAGGAGACCAACACATTTGCAGCACTCGACAAAACAAGGTAC
Long Flanking Sequence:
ACCGATACCTTATTGTCCGCGTCTGCATCGCGGTGCACCGAAGAAACAATTAATTTTGACACCCCTAATATATATATATATATATATATATATATATAATTTATAAAATAATTTGAGCCAAACTAAAATACTTTCTCTAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTGTGTGTGTGTGTGTGTGTGTGTATTACACTGAATGTTATTTAAGTGAGTGTTTTCTGTAAATCACTGGTAAAAAAAAATCTGATTGTCATTATTTTGCTCGGAACAAAGCGTTTGAAATGCCTTTTCCTCTTTGACCCATTACTTCATTTGGACTTTGTTTATTTTCCAGGTCAGTATTATGCAGTATTCAGAGGATTTGTCTTTTCTTTACCATTTTAGCTTTGATCAAAATAAGCAGAAAGTTCTTTTAGCGGCTTCTGATATTGACCAA[C/T]AAACTGGTCAGGAGACCAACACATTTGCAGCACTCGACAAAACAAGGTACCCTACACCATAACAAACTATTAAAATTAATATATATATATAGTTTGCATGTTTCCCAATGATGGGTTGCAGCTGAAAGGGCATCTGCTGCGTAAAACATATGCTGGATAAGATGGCGGTTCATTCCGCTGTGGCGACCCCTGATTAATAAAAGGACTAAGCCGGAAAGAAAATAAATGAATGGTTTGCATGTTCTTCCCGTGTTCAAGTGGGTTTCCTCCAGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGTGGTACAGGTGAATTGAATAAACAAAATTTTTATGTGTGTGAATGAGTGTGTGTGTATTTCCCAGTACTGGGTTGCAGTGGAAATGGCATACGCTGTGTAAAACATTTGCAGGATAAGTTGGTGGTTCATTCTGCAGTGGTTACGGCTAAAGGAAAAAGAATGTATATATATATATATATATATATATATATATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34850
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000100947 Nonsense 219 293 6 9
ENSDART00000140894 None None 254 None 7
Genomic Location (Zv9):
Chromosome 10 (position 8948002)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 9023958
GRCz11 10 8857517
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAAGCAGAAAGTTCTTTTAGCGGCTTCTGATATTGACCAACAAACTGGT[C/T]AGGAGACCAACACATTTGCAGCACTCGACAAAACAAGGTACCCTACACCA
Long Flanking Sequence:
TTATTGTCCGCGTCTGCATCGCGGTGCACCGAAGAAACAATTAATTTTGACACCCCTAATATATATATATATATATATATATATATATAATTTATAAAATAATTTGAGCCAAACTAAAATACTTTCTCTAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTGTGTGTGTGTGTGTGTGTGTGTATTACACTGAATGTTATTTAAGTGAGTGTTTTCTGTAAATCACTGGTAAAAAAAAATCTGATTGTCATTATTTTGCTCGGAACAAAGCGTTTGAAATGCCTTTTCCTCTTTGACCCATTACTTCATTTGGACTTTGTTTATTTTCCAGGTCAGTATTATGCAGTATTCAGAGGATTTGTCTTTTCTTTACCATTTTAGCTTTGATCAAAATAAGCAGAAAGTTCTTTTAGCGGCTTCTGATATTGACCAACAAACTGGT[C/T]AGGAGACCAACACATTTGCAGCACTCGACAAAACAAGGTACCCTACACCATAACAAACTATTAAAATTAATATATATATATAGTTTGCATGTTTCCCAATGATGGGTTGCAGCTGAAAGGGCATCTGCTGCGTAAAACATATGCTGGATAAGATGGCGGTTCATTCCGCTGTGGCGACCCCTGATTAATAAAAGGACTAAGCCGGAAAGAAAATAAATGAATGGTTTGCATGTTCTTCCCGTGTTCAAGTGGGTTTCCTCCAGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGTGGTACAGGTGAATTGAATAAACAAAATTTTTATGTGTGTGAATGAGTGTGTGTGTATTTCCCAGTACTGGGTTGCAGTGGAAATGGCATACGCTGTGTAAAACATTTGCAGGATAAGTTGGTGGTTCATTCTGCAGTGGTTACGGCTAAAGGAAAAAGAATGTATATATATATATATATATATATATATATATATATATATTT
Associated Phenotype:
Not determined