ZMP

matn3b

Ensembl ID:

ENSDARG00000069265

ZFIN ID:

ZDB-GENE-050221-9

Description:

matrilin 3b [Source:RefSeq peptide;Acc:NP_001012385]

Human Orthologue:

MATN3

Human Description:

matrilin 3 [Source:HGNC Symbol;Acc:6909]

Mouse Orthologue:

Matn3

Mouse Description:

matrilin 3 Gene [Source:MGI Symbol;Acc:MGI:1328350]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa24939	Nonsense	Mutation detected in F1 DNA	Not yet available
sa28147	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa24939

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000100650	Nonsense	204	299	2	4
ENSDART00000100653	Nonsense	339	434	3	5
ENSDART00000100655	Nonsense	339	478	3	6
ENSDART00000145395	Nonsense	339	478	3	6
ENSDART00000146249	Nonsense	339	434	3	5
ENSDART00000148040	Nonsense	204	343	2	5

Genomic Location (Zv9):

Chromosome 13 (position 32853702)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	32499650
GRCz11	13	32630100

KASP Assay ID:

554-7424.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAAGTCGAAGAGGTGTCAGCAGCAGCAAGGGCTTCTGGGATTGAAATATA[C/A]GCAGTAGGAGTGGACAGAGCAGAAATGCGGTCCCTCAAGCAGATGGCCAG

Long Flanking Sequence:

ATTTTATGAATTTTTAATATTTATGTGATTTTAATACTAATTTATTATTTATCTCCCACAGCTCCAGCAGAGCCCTGCAAGAGTCGTCCACTTGACCTGGTCTTCATCATCGACAGCTCTCGAAGTGTCCGTCCTGCAGAGTTTGAGAAGGTCAAAATCTTCCTCTCAGAAATGGTTAACTCTCTGGATATCGGATCCGATGCCACAAGAGTCGCGCTGGTCAACTACGCCAGCACCGTCAACATTGAGTTCCATTTGAAAAAGTACTTTAGTAAGGCTGAGGTCAAGCAGGCCTTCTCCCGTATTGATCCACTCTCGACAGGAACCATGACTGGCATGGCTATCAAAACCGCCATGGAGCAAGTTTTTACAGAAAATGCTGGAGCCCGGCCGTTAAAAAAGGGCATTGGTAAAGTGGCCATTATTGTGACAGATGGAAGACCGCAAGATAAAGTCGAAGAGGTGTCAGCAGCAGCAAGGGCTTCTGGGATTGAAATATA[C/A]GCAGTAGGAGTGGACAGAGCAGAAATGCGGTCCCTCAAGCAGATGGCCAGTCAGCCGCTCGATGACCATGTGTTTTATGTGGAGACATACGGAGTGATCGAGAAACTCACATCCAAGTTTAGGGAAACGCTCTGTGGTAAGAGAACATAGAGGGTTTAATCTACAATTATGAAGCACTTAAAGTAAAATAAAAAGTGTTTAAATATATATTTGGGTCAAAAATGAGCTGTCCTGTTTTGCAAAAGTAATTTTATATGCTTAGAAAGCAAAATTTTAGGCCTTAAAAAGTCTTAAATCTACTGAAATGTTGTGTTGGGGGTCTTAAATCTTTTTTAACAGGTCTTAACTTTACTTTGTTTATGTATAGCTACCCAATCTGGCCATTAACACCCTTACAATCACCAACAATCCCAATCTCAATAAAACTATTAACTTTTAAAAAATAGCATTTAATTACTTTCTATTTATTTACTGCTGAGGATACAGACCCAACCTTTATT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa28147

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000100650	None	284	299	4	4
ENSDART00000100653	Essential Splice Site	420	434	5	5
ENSDART00000100655	Essential Splice Site	464	478	6	6
ENSDART00000145395	None	463	478	6	6
ENSDART00000146249	None	419	434	5	5
ENSDART00000148040	None	328	343	5	5

Genomic Location (Zv9):

Chromosome 13 (position 32851265)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	32497213
GRCz11	13	32627663

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACACTTGGTTATTGTGTTAACATTGTGTGTTTTTCTTAACTGTTCCTACT[G/T]GATGACATCTCAAACAGAGTCCAGCAGTTTGATCTTCGTCGTGCCTAGAT

Long Flanking Sequence:

AATATTATTTTGGTACAAATCACAAAAATGCACTGAACAAATGTAATATCTTAAGGATTAAATATTGTATGTGTTATTGTAAATTCACTTTCTGAATGCATTAATATTATTTAAATCTGTTGTTTGAATTTATCGTGTGTGGAGTAAGTGAAAAATTTTCAGCAATAAAAGTATCTCGAAAATCATGTCTGTTTCTCTTACAGAAGAAGCAAGAGCAGATCTGACTGAAAATGCCTGCATGTGTGAGGCTCAGATTGCCTTTCAGCGGAAAGTTCACAACAGCATACAGACGCTCTCCAGCAGACATATCCTTTCATATTTATATAGTATTTGCTTGTTATCGCATATCCTATTAACTACTATCACAGTCTGATAGCAAATAGTAATTAAGTTTTAAATGTTTTTATGATGTATATTAAGATTTTTCATTGAAAGTTAATCTAATTTAAAACACTTGGTTATTGTGTTAACATTGTGTGTTTTTCTTAACTGTTCCTACT[G/T]GATGACATCTCAAACAGAGTCCAGCAGTTTGATCTTCGTCGTGCCTAGATTGGAAGATGGGACTCAAAGCTGCTTATCTGAATAAAATAAATAGTTATTTAAACTTTTATTGTAACTGCATGTGCATCCTCGTTTTGTTCATTTAACTGTTAAATATCTGTTCGTCATGTTTTGAGTATTATTTTTGAGTAATCGACATGTCAAAAAAAAAAAAAAAAAGGACACAAATTGAAGTATTTGGAAGAATGCATTTATTTTTTGGAACAAATAGTAAAAGTAATATTGCTATTTTGGAGTGTTATGTAAAGTATACGCACATCATTTTATGTTTGGAAAATTGTACAAATATATGTGAATAAATAAAATATTGTTTGATGTCATTTTCTGTCTTTATATTGTTTGACTATTTGTTTTAGATTTTTGAATTCGTTTCACAGATATTCAAAATAATTATGGTATCACAAATGATTAGTTTTGATTAGATGAGGAGTTTTTAAACT

Associated Phenotype:

Not determined