ZMP
gramd4
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to mouse cDNA sequence BC021523 (BC021523) [Source:UniProtKB/TrEMBL;Acc:Q5RIP4
Human Orthologue:
GRAMD4
Human Description:
GRAM domain containing 4 [Source:HGNC Symbol;Acc:29113]
Mouse Orthologue:
Gramd4
Mouse Description:
GRAM domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:2676308]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40309 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2167 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa40309
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000042576 | Nonsense | 12 | 480 | 1 | 16 |
| ENSDART00000100465 | Nonsense | 12 | 488 | 1 | 17 |
| ENSDART00000134605 | Nonsense | 111 | 586 | 3 | 18 |
Genomic Location (Zv9):
Chromosome 4 (position 27389755)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 28104095 |
| GRCz11 | 4 | 28093383 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTTCACTTTTTTATCATTTTAGAGGAGGAATTACGGAAGCTACGAGAA[G/T]AAACCAATGTGGAAACCCTTAAGCAGGAGCTGGAAAGAGAGCGCAGCAGG
Long Flanking Sequence:
CCCGGTGGAATGTACATTTTGTAAAAAAAAAAAAATCATGTTTTCCAGTAAGCTGTGGGCTAAAAATATGCAGAAAAAAATCAACGTTGCCAATTGTAAGAATAAGTTAGTGTAAACTTTTTTCCTAAATACAAGCAATATTAACCATAACTTACTTTATATTTTAAACCACCAACAAGGGATGCTATCCCTGAACGTTTACTTTAGCTAGAATCTATACTAGAACAGTTTAGGCTAGTGAAACTCTAAATGCAGTTAATAGAAACGTCGCTATAGATTAATTGACTGTCTGCCTAGAGTTATACAGTTGACAGCATTCATTTCATCTGAACCCATCGGGCAGAAGCACTTCCAGGAAAAACCTACATATTCATGCTCATATATTTTGAGCTAGATAATATTTGTTTTAACACTTATTAAAGAAGATTCTTAAAAATGCGTGGTAGTTAAGTGTTCACTTTTTTATCATTTTAGAGGAGGAATTACGGAAGCTACGAGAA[G/T]AAACCAATGTGGAAACCCTTAAGCAGGAGCTGGAAAGAGAGCGCAGCAGGAGACTTGACCTGGAACAGAAGATGAGCGATGTGCTGAAAACCAGGTAAAAACCACACTACTAAAAAAAAAAAAAAAACACACACACACAAATATACACAAAGCAAGAAATTTGCTTTACATAGTGTCAAACCTGTCAAAACAATGGATAACATTAGGGATTAGAATTACATAACACTTCTTATTCACGGTTCAGTTTTAGCACACTCAAACACGCACACACACATATTCACCCACACGGAAACAAAACAAAAAAAACTAATGTAGATTTCCAGAAAATATCAGAAAAGTAATTTTGAACCCTCCTTCTGACCCTTTAAGTTAAATTGTTCTCTGATATCTACATAGTAGGTACGTGGCTTAGGTAAGTTCAAAAACTATTCTGGAATTATTTTATTTTCTCATTTATAATAACTGGAGTTACCCCTAGAATAAAAAGCTTTGTTTTGACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2167
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000042576 | Essential Splice Site | 403 | 480 | 13 | 16 |
| ENSDART00000100465 | Essential Splice Site | 403 | 488 | 14 | 17 |
| ENSDART00000134605 | Essential Splice Site | 501 | 586 | 15 | 18 |
Genomic Location (Zv9):
Chromosome 4 (position 27365523)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 28079584 |
| GRCz11 | 4 | 28068872 |
KASP Assay ID:
554-3222.1 (used for ordering genotyping assays)
KASP Sequence:
AAGATGCCCACTGAYTACATCCGCAAYGGGATGCTCTACGTCACTGAGAA[G/A]TAAGAAACATCTGCTTTTATCCCTGACAAATCTACTGAGATTGAAGTTST
Long Flanking Sequence:
GTAAAATGGCGATGTTGTTTTTTTGTTGACTTTATTGTTATGCCTGGCAGTGAATGCAAATGGCTACTTTGAGTTGTTGTAGGAATGAAATGCCCCCTTTATTTTATGTTCAGGTTCAGCCTGTAGTATCGCGGAGTAGTTTAGCCACTATCCCACCCGGAGTGACCCGAGAAGAAGAGAGTGGTCGTTCACACAACCCAAAGAAAGGAGTGTTTCATGAGGTCTTCAACCTACCTGAAATTGAGAGACCTCTGCCCAGTAAGTACCCTCTGTCACTTTGTTCTTGTCATTTTTGCATCCCAAATAAGCACTCGAACGCTAATTAGGAGGAAGATGAGACAAACTTAAGTTAGACACACTTATGGTTACAGGTTTATTAAAAGCAAATTATAATTTTGTTTTTCAGTTTGTGAGAATGGATGGAGATGCTGTCTGATAAACAGAGACAGGAAGATGCCCACTGACTACATCCGCAATGGGATGCTCTACGTCACTGAGAA[G/A]TAAGAAACATCTGCTTTTATCCCTGACAAATCTACTGAGATTGAAGTTCTCTTGCATATTCAGAATTATTTTATGGCAGAATTTTACATCATAACAATTTAAAAGGCTCAACAGATCAAAGTTAGAGAACAATTTCAAAACATTAGCTTTTTCTTTAAAGGTGCAGTAGGTGATCTGCCAAAATGCTAATCGCTTAGCATATTACCTTTGGACGGCGAGGAGGGACTGCGATTAAAAGCCACACCCCCTGAAATTGCGAGCGCGCACCACGTCACAACAGCAGACAGACAACCCACTAGTTCAGGTCATTCGCCAGTTAGTTAGTGCCAGCGCTGTATTTACAGGAATTACATGTATTACTTTTCCACACTTACATGCTATTTATTTCAGAGCGAATATTCAGAGTAGCATGGTAAACAGTATAGGGAGGCTGTCATTGTTCAAAAATGACCCAATGTGAATATAAAAGCAACTTCAGCTCAATAAAGCAGGCTAGGCGG
Associated Phenotype:
Not determined