Busch Lab

ZMP

si:ch211-216l23.2

Ensembl ID:
ENSDARG00000069122
ZFIN ID:
ZDB-GENE-030131-3806
Description:
hypothetical protein LOC565061 [Source:RefSeq peptide;Acc:NP_001038534]
Human Orthologue:
NCOA5
Human Description:
nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:15909]
Mouse Orthologue:
Ncoa5
Mouse Description:
nuclear receptor coactivator 5 Gene [Source:MGI Symbol;Acc:MGI:2385165]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa44888 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa23278 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa44888
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000100341 Essential Splice Site 186 474 5 9
ENSDART00000135236 Essential Splice Site 186 474 6 10
ENSDART00000137239 None None 118 None 4
Genomic Location (Zv9):
Chromosome 18 (position 17421968)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 17773734
GRCz11 18 17762800
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAACACTTTCCTCGTGCACAGTAATCATATTTTCAGAGTCCCTCAAAAG[T/C]AAGTCCCAACTCCCACAAGCTGTTTTCCATTTAAACCACTTTAAATGTTC
Long Flanking Sequence:
CTAATAATTTAGGAGGGCTGATAATTCTGACTTCAACTTTATATGTAATGTGTAAAATGATGATGTTTTTCAAAGTCCTCGGGCAAAAGCATTTATTCGGGTAAAAACAGGACAATTTTGTCATTTTAATATTTTTTACACACTTTTAATATGCTGAACAGATTTGTGTTGGTTTATTTATCCGTGTGGCACATTAAATCCTAACACATTCATTGCTGCATATATCAACCAGGCCACACCCAACAGCCTCAGCTGAAGCGCGGTGCGCAATAACCACATCTCTTCTTCTTCTTTCAAAGGGAATACCCCAAATCATTAGGCCAGTGTTTGCAGGAACTTGGCCTCACTGTGGAAATGCTTTACCTGCAGTCGGAATCAGGCCTGACGCGGGCCCTCCAAGATGTCCGCTCCGACGGTTCCCCCTTTTGTATTCTCGTCGAGCAGACTAATGTAACACTTTCCTCGTGCACAGTAATCATATTTTCAGAGTCCCTCAAAAG[T/C]AAGTCCCAACTCCCACAAGCTGTTTTCCATTTAAACCACTTTAAATGTTCTACAGTTACTACAATTAAATATACAGAACAAGAGAACTACAGTAAAATACATTTGATCTGGTGGTGGGCATTTTTAGTAAATCTTAACTGACATCATTTATGTTTGTGATTGCACAAAAAATACATAAATAACCAATTCTGGAAATACACTGCCAAAACAATTCAACAATGTCAAAAACTGCAAAACAAAAAGTCTACCAACTGCAAAAACAAACAAAAAAGGTCAAAGAATGGCAAAAGCATCAGTGTTTTGTCCAATAATGCAGACATTGCAAAATATTGTAATTCTAAGAATGTTAAAAGCTTCGTTGGACATGACACCAAAATATAAAACATGACCTGTATTTTTGGGTAGAAACATGCTTACAGATTTTTTTTTCTGAAAATATTTAATATTCTAATGCCGAGTTCAGACTGCATGATTTTCTGCATGATGACAGATTTTTAGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23278
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000100341 Nonsense 188 474 6 9
ENSDART00000135236 Nonsense 188 474 7 10
ENSDART00000137239 None None 119 None 4
Genomic Location (Zv9):
Chromosome 18 (position 17427561)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 17779327
GRCz11 18 17768393
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACCCTCTCCCTCCGCTGGCTGACCCTTCCTCTGCCTCTCTACAGTTCAT[C/T]GAAATATGCCTAAAGAACATGCTATGGAGTTTGTGTTGACGGAGTATGGG
Long Flanking Sequence:
CAAATACACATATTTACATTTAAAATAGTTTTCGATGCAGTCCTAGTTTCGATTTTCCACATTTAATGACTAATTCAGACTATTGATATGACAACATAGACAAAGAGCATATGTGCTAGTCACCCATTGGCTGTAGTGTATGCAGTGTGTTTCAATGCATCTTAGCCATGTAATGTAAGACGACAACACTGTCAAATTTGTCGTCTATTTTGTTGTCACAGTGAGTCTAAAAATGCTCACACTTAAAAAGCAATCTTTTAACTTTTACTCCAAGTGTCCCTATACCCAACTGGCAGGCGGGCTCATGAATGCATCTTTGAGTGCCTTCTGAATGTTGATGTAGTAATGGGGTTAAGCAGCGGTTGGCCGACTGCAGTATGTGTTGCTGATGAGGTGAAACTCTTCTACACACTGCTTAGACTGCAGCGCCTCACACTGAGCACCATATGTAACCCTCTCCCTCCGCTGGCTGACCCTTCCTCTGCCTCTCTACAGTTCAT[C/T]GAAATATGCCTAAAGAACATGCTATGGAGTTTGTGTTGACGGAGTATGGGCGCCAGAGCAGCCCGCAGCGGGCGTTGAACCCCACGGAGGCTGCGACGCGGGCGGCTGAGCTGACGGAGGACTACCTGGAGCGCGGCAAGCTGGAGCGCCACACCGTTCCCTTCACCACCCGCCACCTGCTCTTCCTCCTGGCCGAAGGGTTGCACCTGTACCCGGAGGAGGTTAGCACACTGGCTGTGTTTCTCCAGAACCGCCAGGACCATCTGCAAGGTGAGTGTGCTGGCCTAGTTACGCTCCTATCATAGGGGTTCATCATTTTTTTGTGTTTCTTTGTGCATGATGTCATTTAATGAGCTCCAGTTAGTTTGCTAGGTGTGTGTGTGTGTGTGTGTGTTTGAGGAATAAATCTATGCATATTATACGTTGAATATGTACAAGAATTTGAAGCTGACACAGGGGAGCGGACATTTGTTGACCAAGCAATGACCAGGCCCACATGG
Associated Phenotype:
Not determined