Busch Lab

ZMP

si:ch211-137a8.2

Ensembl ID:
ENSDARG00000068926
ZFIN ID:
ZDB-GENE-061103-172
Description:
hypothetical protein LOC777613 [Source:RefSeq peptide;Acc:NP_001071189]
Human Orthologue:
CLMN
Human Description:
calmin (calponin-like, transmembrane) [Source:HGNC Symbol;Acc:19972]
Mouse Orthologue:
Clmn
Mouse Description:
calmin Gene [Source:MGI Symbol;Acc:MGI:2136957]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa11061 Nonsense Available for shipment Available now
sa409 Missense, Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa11061
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099856 Nonsense 222 291 5 12
ENSDART00000131755 None None 199 None 4
ENSDART00000141164 Nonsense 161 166 4 4
ENSDART00000144126 Nonsense 222 632 5 13

The following transcripts of ENSDARG00000068926 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28396684)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29114714
GRCz11 15 29047590
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGGCCAGCGGGAGGATTTCGAGAGGCAGAGGGAAGAGATGGCGGTCTGGT[T/A]GGCTGAWATGGACCTCAGGCTGACTGAAGTGGAGCATTTCTCGGGCAAAG
Long Flanking Sequence:
TATTACCGCACCTTCACAGTGTACAAAGTGCTTAAATGTTCTCAAAATATAAATTTTTTAGTCTTAAAACCAACCAAAAGAAAAAAACTCCCTTTTGAAAGACACTTTTAGCCACTACTTTCTACACATCTAAGTCTCTCTTGCCCCTTTCCTGCCTTCATTTTAATCCCATTAACTCTTTATCCACACGGCCTTCTGCTGCGCCCGCCTTTGGCTTACATAATTCTGTCCTTCTAGCCGCAGTGACCCTGCAAACCGTCTCTCTGTGCTCAGCGGTGCAGTGTTTTGTTTGTGCCGTTTCCGATTTGACGTCCCTGTTGTAATTTTGATGCGTCTCCCTGTCAGTCTGTGTCTGTGCTAAAAACAGCATCAGGATGTAGACAGTCAGACACAATCACGCTCTGCCTGTGTGTGTGTTTTTGTGTGTGTGTGTCTATGACAGCATTTGGTGGGCCAGCGGGAGGATTTCGAGAGGCAGAGGGAAGAGATGGCGGTCTGGT[T/A]GGCTGATATGGACCTCAGGCTGACTGAAGTGGAGCATTTCTCGGGCAAAGACACCTGCTCGAAGATGCACCAGCTTCAGGTATTTTAAGCAAGATGTAGATTTAAGTGTCAGGCCATGCAGAGGAATGGTGTGTCTGTGTGTGCAGTGGCTTGGCATCTGGCTTGTCTGGTTTATGGGGTACAGGTGCAGGTTTTTAACCCCTGAGTTGCAGGTTAAGAAACAAAAACACAAACAAAAGCAAAAGGTGGTTTTAAGCTTAAGCACCACTTTCCATTTCAAACATTGTCCTTGTAATAAGTGTATAAAAGATCATTAAAAATAATTGAGGTACAGAAATTTTACAGTGTTAGGTTTCTGTCAAGACTACATGTTTATGTGTGTATATATATTTATAAAAGGCTATGACAATACTTTCATAGTGTCATCGTTTTTGTGTCCAGGCACATCAATTATAATGTTATTTATTTATTTATTTAGAAATAAGTGAAATAAATAAAGT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa3926
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099856 Essential Splice Site 224 291 None 12
ENSDART00000131755 None None 199 None 4
ENSDART00000141164 Missense 163 166 4 4
ENSDART00000144126 Missense 224 632 5 13

The following transcripts of ENSDARG00000068926 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28396691)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29114721
GRCz11 15 29047597
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGGGAGGATTTCGAGAGGCAGAGGGAAGAGATGGCGGTCTGGTTGGCTGA[T/A]ATGGACCTCAGGCTGACTGAAGTGGAGCATTTCTCGGGCAAAGACACCTG
Long Flanking Sequence:
GCACCTTCACAGTGTACAAAGTGCTTAAATGTTCTCAAAATATAAATTTTTTAGTCTTAAAACCAACCAAAAGAAAAAAACTCCCTTTTGAAAGACACTTTTAGCCACTACTTTCTACACATCTAAGTCTCTCTTGCCCCTTTCCTGCCTTCATTTTAATCCCATTAACTCTTTATCCACACGGCCTTCTGCTGCGCCCGCCTTTGGCTTACATAATTCTGTCCTTCTAGCCGCAGTGACCCTGCAAACCGTCTCTCTGTGCTCAGCGGTGCAGTGTTTTGTTTGTGCCGTTTCCGATTTGACGTCCCTGTTGTAATTTTGATGCGTCTCCCTGTCAGTCTGTGTCTGTGCTAAAAACAGCATCAGGATGTAGACAGTCAGACACAATCACGCTCTGCCTGTGTGTGTGTTTTTGTGTGTGTGTGTCTATGACAGCATTTGGTGGGCCAGCGGGAGGATTTCGAGAGGCAGAGGGAAGAGATGGCGGTCTGGTTGGCTGA[T/A]ATGGACCTCAGGCTGACTGAAGTGGAGCATTTCTCGGGCAAAGACACCTGCTCGAAGATGCACCAGCTTCAGGTATTTTAAGCAAGATGTAGATTTAAGTGTCAGGCCATGCAGAGGAATGGTGTGTCTGTGTGTGCAGTGGCTTGGCATCTGGCTTGTCTGGTTTATGGGGTACAGGTGCAGGTTTTTAACCCCTGAGTTGCAGGTTAAGAAACAAAAACACAAACAAAAGCAAAAGGTGGTTTTAAGCTTAAGCACCACTTTCCATTTCAAACATTGTCCTTGTAATAAGTGTATAAAAGATCATTAAAAATAATTGAGGTACAGAAATTTTACAGTGTTAGGTTTCTGTCAAGACTACATGTTTATGTGTGTATATATATTTATAAAAGGCTATGACAATACTTTCATAGTGTCATCGTTTTTGTGTCCAGGCACATCAATTATAATGTTATTTATTTATTTATTTAGAAATAAGTGAAATAAATAAAGTATTTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa409
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Missense, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099856 Nonsense 240 291 6 12
ENSDART00000131755 None None 199 None 4
ENSDART00000141164 None None 166 None 4
ENSDART00000144126 Missense 345 632 7 13

The following transcripts of ENSDARG00000068926 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 28403093)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 29121123
GRCz11 15 29053999
KASP Assay ID:
554-0268.1 (used for ordering genotyping assays)
KASP Sequence:
GTCCCTCTGAGAGTTTGCTGGAGGACGAGGGCTTCATGGAAAAGATCATG[G/A]CTCCTTTTCCTCAGTCCAGTCACGATCAGCTGGTTCTGGAGTGGGACCCT
Long Flanking Sequence:
CACTTTATATACATATGCTGGATAAGTTTCCAATTCATTCTGCTGTGGCGACCCAAGATTATAAAGGGACTAAGCTGAAAAGAGAATGAATGAATGACTAAACTCCAGCATTAAACAGCCACAAAATGACTATTAATTGGCATTGCAAATACATCTTAAAAAATAAATAAATAAATCTACGTCTAGTAAATAATATTTGCATGATTTCTGGACAAAAATTAAACCTTGCATCACACAAATAAATGACATTTTCTAACTTTAATATTATGCTATATTATTTGAATCTAATAAACACAACCTTGACGAGCATACAATATTGATGTATATATTTTTTAAATAATCTTGTCATGAAGTAACCTGTTTACATTAAAGTGGGCTTCTGTAACTGCAGGTGTGTATGTGTGCAGGTGTTTGAGGAGGACTGGGCTCTGTGCTCTCCTGACTCCGGCTGTCCCTCTGAGAGTTTGCTGGAGGACGAGGGCTTCATGGAAAAGATCATG[G/A]CTCCTTTTCCTCAGTCCAGTCACGATCAGCTGGTTCTGGAGTGGGACCCTTCAGTGGACATCGGCGGTTCAATCTCTCATGATGACACTGACTCGTCCTCCTTCAGTGCTGCTGCAGGTAATAAAGTCTGACCCTACGATACAATAGTTCCTCCAAGAAAAAAAAAAATCTTCATAATTTCTTGCAAAATAAGGCCAGGTGTTTATGAAATGGTTAATAATTAACATAATATTAATTGTATTAAGCGCTCTTTTTGTCATTGACTGTGTAACACACAGTCACACAACTTCAGTTACTTATTCATGGTCAACTTAAAATGCTAGTTGGGGAAGTAATATGTATGGAAATGTTTACATACCAATAACTCTCAATTTTTATTTATTTATTATTTTACATTTATGAGGTCATGACTGGTATATAGGCCAATAAATATAAATCATATTAGTTATTCTTAGCTTGATTTTAGAAAGTAAGAGGAAATGCATTCAATGGAGTATTAT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461