Busch Lab

ZMP

olfcd3

Ensembl ID:
ENSDARG00000068576
ZFIN ID:
ZDB-GENE-050712-4
Description:
Odorant receptor VR3.13a [Source:UniProtKB/TrEMBL;Acc:Q4VDB2]
Mouse Orthologues:
AC139131.1, AC161211.1, AC161211.2, Vmn2r54
Mouse Descriptions:
vomeronasal 2, receptor 53 [Source:RefSeq peptide;Acc:NP_001098114]
vomeronasal 2, receptor 54 Gene [Source:MGI Symbol;Acc:MGI:3704110]
vomeronasal 2, receptor 55 [Source:RefSeq peptide;Acc:NP_001098115]
vomeronasal receptor Vmn2r56 [Source:RefSeq peptide;Acc:NP_001098118]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa18045 Nonsense Available for shipment Available now
sa25067 Nonsense Mutation detected in F1 DNA Not yet available
sa36679 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa10065 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18045
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059500 Nonsense 183 850 3 6
ENSDART00000099111 Nonsense 102 539 2 7
Genomic Location (Zv9):
Chromosome 18 (position 31321423)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33118282
GRCz11 18 33092877
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGATCAGTCAYTTTGCCACATGTGYCTGCTTGAGTAACAGAAAAAGGTA[T/G]GCATCCTTCTTTAGAACGATCCCCAGTGACTATTACCAAAGCAGAGCACT
Long Flanking Sequence:
TTTGCTCAAACACTGATTTTTGCCATCGAAGAGATTAATAACAACACACAGCTATTGCCTGGTGTGTCTTTGGGCTATAAGATATATGATTCATGTGGCTCAATAGCTCAAGCTATATTCTCAGGCATGGCTTTGATGAATGGTTATGAAGAAACTTTGAGCGATACATCCTGCTCTAGACCACCAGCTGTTAATGCCATTGTAGGAGAGTCAAACTCCTCTCCCACCATAGCCTTGGCTTCTATAGCTGGTCCATTCAGTTTACCTGTTGTAAGAACCCTTGCTTATTGGCTTGTTATTGTGGCAAGTGTTTTTTTTTTCCTTTTTTTTTTTTTCATTAGTTGCACAATCTTTAATGCAAGTATGTAAATTGTATTTACAGTATAATTATATACTGTATATATTACTTTTGATTAAATAAGTGAATAAAATATTCTGTTTCTCCTCTTGCAGATCAGTCACTTTGCCACATGTGCCTGCTTGAGTAACAGAAAAAGGTA[T/G]GCATCCTTCTTTAGAACGATCCCCAGTGACTATTACCAAAGCAGAGCACTGGCTCAGCTTGTTAAGCACTTTGGCTGGACCTGGGTTGGTACAGTCAGGAGTCGCAGTGATTATGGCAATAATGGCATTGCAACATTCGAGGAAGCAGCAAAAAAAGAGGGGATTTGTATTGAATACTCAGAGGCCATATTAAGAACTGATCCACAAGATCAATTTCTGAAGACAGTAGAAGTGATAAAGAAGGGCACTGCGAGGGTTGTGTTAGCTTTTGTTGCATTAAGAGATTTTTACCCACTTTTAAAAGAAATTGCGCAACAAAACATTACAGGGCTGCAGTGGGTTGGCAGTGAATCTTGGATAACATCCCGAACTGTAGCAGAAACAAAGGAATATAGTTTCCTTTCTGGAGCTGTGGGCTTTTCTATAGCAAATGTCAAACTTGTGGGCCTACTAGATTTTCTAGTGAATGTGCACCCTGATCATGAACCGAAAAATAAACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25067
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059500 Nonsense 289 850 3 6
ENSDART00000099111 None None 539 None 7
Genomic Location (Zv9):
Chromosome 18 (position 31321107)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33117966
GRCz11 18 33092561
KASP Assay ID:
554-7897.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTGTTGCATTAAGAGATTTTTACCCACTTTTAAAAGAAATTGCGCAA[C/T]AAAACATTACAGGGCTGCAGTGGGTTGGCAGTGAATCTTGGATAACATCC
Long Flanking Sequence:
TTTTCCTTTTTTTTTTTTTCATTAGTTGCACAATCTTTAATGCAAGTATGTAAATTGTATTTACAGTATAATTATATACTGTATATATTACTTTTGATTAAATAAGTGAATAAAATATTCTGTTTCTCCTCTTGCAGATCAGTCACTTTGCCACATGTGCCTGCTTGAGTAACAGAAAAAGGTATGCATCCTTCTTTAGAACGATCCCCAGTGACTATTACCAAAGCAGAGCACTGGCTCAGCTTGTTAAGCACTTTGGCTGGACCTGGGTTGGTACAGTCAGGAGTCGCAGTGATTATGGCAATAATGGCATTGCAACATTCGAGGAAGCAGCAAAAAAAGAGGGGATTTGTATTGAATACTCAGAGGCCATATTAAGAACTGATCCACAAGATCAATTTCTGAAGACAGTAGAAGTGATAAAGAAGGGCACTGCGAGGGTTGTGTTAGCTTTTGTTGCATTAAGAGATTTTTACCCACTTTTAAAAGAAATTGCGCAA[C/T]AAAACATTACAGGGCTGCAGTGGGTTGGCAGTGAATCTTGGATAACATCCCGAACTGTAGCAGAAACAAAGGAATATAGTTTCCTTTCTGGAGCTGTGGGCTTTTCTATAGCAAATGTCAAACTTGTGGGCCTACTAGATTTTCTAGTGAATGTGCACCCTGATCATGAACCGAAAAATAAACTTTTAAAAGAATTCTGGGAAACAACATTCCAGTGCTCTTTTAATAACAGAGGAAGCGTTGGGTGTACTGGCTCAGAGAAACTAGCAAACTTACAAAATGAATATACTGATGCCTCAGAGCTACGGATAGCCAATAAAGTGTACACAGCAGTGTATGCTGTTGCACATACACTACACAATATATTTCAAGACTTCAAATCAGCCAACAGGAGCAAATTAAAACAACCAACACCTCAAATGGTGGGTGAAAAATTAGATATAGGATATAGGAATAGGATTCAGGGATGAATGAATTTGTCATAATAGTTTTAATATTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36679
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059500 Essential Splice Site 505 850 4 6
ENSDART00000099111 None None 539 None 7
Genomic Location (Zv9):
Chromosome 18 (position 31320371)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33117230
GRCz11 18 33091825
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTCTTCAGGTTAATCAGGAACATGTGCTATGGGCAGATAACAGTAGACAG[G/A]TATTATTTTCTACTGTATCAAAATAAGGTAATGAGAAAATTCTCAAAACA
Long Flanking Sequence:
AAGCGTTGGGTGTACTGGCTCAGAGAAACTAGCAAACTTACAAAATGAATATACTGATGCCTCAGAGCTACGGATAGCCAATAAAGTGTACACAGCAGTGTATGCTGTTGCACATACACTACACAATATATTTCAAGACTTCAAATCAGCCAACAGGAGCAAATTAAAACAACCAACACCTCAAATGGTGGGTGAAAAATTAGATATAGGATATAGGAATAGGATTCAGGGATGAATGAATTTGTCATAATAGTTTTAATATTTCTCCTCAGGTACTGAACTATATGAAAGATGTAAGATTCACTGTCAAAACAGGTGAAGAAATATTTTTTGATACAAGTGGTGATCCAGTGGCAAGATATGATCTTGTGAACTGGCAACCTTCTGGGGATGGAAGTCTGCAGTTTAAAAATGTGGGCATCTATGACAGTTCACTTCCTTCAGAGAAATGTCTTCAGGTTAATCAGGAACATGTGCTATGGGCAGATAACAGTAGACAG[G/A]TATTATTTTCTACTGTATCAAAATAAGGTAATGAGAAAATTCTCAAAACAATCAATTTGGCATATTTGTTTTAAAATATATGACATCAGAGAGTCAAAAAGCTTTTGAAAATACAACAGTATTTAGAAGTATATTACAGTCAGTATATTACATTTAAATATTTAATCATACTCCTATAGGCCTTTTATATGACAGCTTATTTTTTCATAGTTGCCTGTATCCGTGTGCAGTGAGAGCTGCCCCCTTGGAACTAGGAAGGCTGTGCAAAAAGGAAGACCGGTCTGCTGTTTTGATTGTATTCCATGTGCAGATGGAGAAATAAGTAACAACACTGGTAAAGCAGTTCATGCTGGTTAACTCTCAAAAAAGTACTTTGAATTAAAATTTATTGTCCAATCCTCACACTGTTCCTTTTCCCCCCTGACAGACTCTAGTGACTGCTCTCCTTGTGATGAGGAGTACTGGTCAAATGAAAGAAAAGAAAAATGTGTGTTAAAAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10065
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059500 Nonsense 725 850 6 6
ENSDART00000099111 None None 539 None 7
Genomic Location (Zv9):
Chromosome 18 (position 31319408)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 33116267
GRCz11 18 33090862
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTTGTTTKGTTAACTGTCTCTCCTCCATTCCCATATAAGAATTTGAGCTA[T/A]TACAGAGAAAAGATCATCCTGGAATGTAATTTRGGTTCAGCTTTGGGATT
Long Flanking Sequence:
TGGTCAAATGAAAGAAAAGAAAAATGTGTGTTAAAAGTGATCGAATTCCTCTCTTATACTGAAATCATGGGGATGGTGCTTTGTATATTCTCCTTTATTGGATTGTTATTAACAGCAATGGTATCTTTTTTGTTCTATCTTCACAAAGAAACACCTATTGTCAGAGCCAACAACTCAGAACTGAGCTTCCTGCTGCTCTTCTCACTCTCACTGTGTTTTCTTTGTTCACTCACTTTCATTGGTCGTCCCACTGAGTGGTCCTGTATGTTGCGTCACACAGCATTTGGGATCACTTTTGTCCTCTGTATTTCCTGTGTTCTGGGGAAAACAATAGTGGTGTTAATGGCCTTCAGGGCTACACTTCCGGGAAGTAATGTCATGAAATGGTTTGGGCCTACACAACAACGACTCAGTGTTGTTTTTTTAACATTAATACAGGTGATTATCTGTGTTGTTTGGTTAACTGTCTCTCCTCCATTCCCATATAAGAATTTGAGCTA[T/A]TACAGAGAAAAGATCATCCTGGAATGTAATTTGGGTTCAGCTTTGGGATTTTGGGCCGTTCTGGGTTATACTGGCCTGCTATCTGTCTTGTGTTTTATTTTAGCTTTTCTTGCTCGTAAACTCCCTGATAACTTCAATGAAGCCAAGTTCATCACATTTAGTATGCTCATATTTTGTGCTGTTTGGCTCACATTCATTCCAGCTTATGTCAGCTCTCCTGGAAAATTCACAGTAGCAGTGGAGATATTTGCTATCTTATCTTCAAGTTTTGGTTTACTATTTTGCATATTTGCTCCGAAATGTTACATAATTTTACTCAAACCAGAAAAAAACACAAAGAAACAAATGATGGGAAAGTCGTCTTCTAAAACTATTTAAAATCATACAAGTAAACAACATTTTCTGTCTTGTGGTTAGCATTCTTATTTTCAACATAATACTTGTTGATTGTTTTCTTTCTTTATTTAAACTAAGAGGGCACATTGAAACCATGTAGACAT
Associated Phenotype:
Not determined