ZMP

si:ch211-10e2.3

Ensembl ID:

ENSDARG00000068240

ZFIN ID:

ZDB-GENE-070912-10

Description:

Novel protein [Source:UniProtKB/TrEMBL;Acc:B0R0I3]

Human Orthologues:

TRIM16, TRIM16L, TRIM25, TRIM29, TRIM47, TRIM8

Human Descriptions:

tripartite motif-containing 16 [Source:HGNC Symbol;Acc:17241]
tripartite motif-containing 16-like [Source:HGNC Symbol;Acc:32670]
tripartite motif-containing 25 [Source:HGNC Symbol;Acc:12932]
tripartite motif-containing 29 [Source:HGNC Symbol;Acc:17274]
tripartite motif-containing 47 [Source:HGNC Symbol;Acc:19020]
tripartite motif-containing 8 [Source:HGNC Symbol;Acc:15579]

Mouse Orthologues:

4933422H20Rik, Trim16, Trim25, Trim29, Trim47, Trim8

Mouse Descriptions:

RIKEN cDNA 4933422H20 gene Gene [Source:MGI Symbol;Acc:MGI:3588186]
tripartite motif-containing 16 Gene [Source:MGI Symbol;Acc:MGI:2137356]
tripartite motif-containing 25 Gene [Source:MGI Symbol;Acc:MGI:102749]
tripartite motif-containing 29 Gene [Source:MGI Symbol;Acc:MGI:1919419]
tripartite motif-containing 47 Gene [Source:MGI Symbol;Acc:MGI:1917374]
tripartite motif-containing 8 Gene [Source:MGI Symbol;Acc:MGI:1933302]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa39890	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa39890

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000098575	Nonsense	330	499	5	6
ENSDART00000143469	None	None	261	None	4
ENSDART00000146149	Nonsense	15	189	1	2

The following transcripts of ENSDARG00000068240 do not overlap with this mutation:

ENSDART00000139477

Genomic Location (Zv9):

Chromosome 2 (position 37834065)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	38148979
GRCz11	2	38131307

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTTTCTACTCGCTGTTTCTATGTGTTATTCAGTAAGCAGCCCATTAACCT[T/A]GGACAAAAACTCAGCTCATCCTCTTCTTAACATCTCTGAAGATCTGCGGT

Long Flanking Sequence:

TTTTATTTAGTTGAACACCTGTAAACCAGTAACCATTAACTTCCATAGTAGGAAAAACAAATGAAGAGTTCAAATGCAAAAACCTCTAAATGCCGTCCGAAATGTCCTCTTAAAATGTTTCTCAGCCTCCTATGTTTGTGTTCAGTTATTTCACTTTAAAGGCAATGGTACTAAGAACTTATTATTCACTATAAAAGTAAAATTAGTCTATACACAGGAGTCAGAGAAAAAAATGCTAATTTTAGAAGAAAATATTAAATGGCATTTGGAGGTTTTTGCATTTATTGAAATCAATGTTTACAGATTTTCAGCGTTCTTCAAAGTATCTTTTTTTATTTTTTATTAAGTGCAGGCTGAGTAAATGATAACAGAATATTGGGTGAACTATCCCTTTAATACTGTATTTGAGTGCCTCATTTGCCTTGTTCAACAGTGACATCTAGTGGTAACGTTTCTACTCGCTGTTTCTATGTGTTATTCAGTAAGCAGCCCATTAACCT[T/A]GGACAAAAACTCAGCTCATCCTCTTCTTAACATCTCTGAAGATCTGCGGTCAGTGAGGAGGGTGCCGAACCGTTTGCCTGTCCCTGATCATCCTGACCGCTTCGACCACTGGTCTCAGGTGCTCTCCTGTCAGATATTTTCTTCAGGGACCCATTACTGGGAGCTGGAGGTGGAGGGTTTCTGGGATATAGCAGTGACCTACCACTGTATTGGGAGAAAAGCAAAAGAGGGCACGGCCTTTGGCTGCAACAAGGTAAATAGTGACCCTAAAACAGGGTTTTCTATGTCTTTCTCGAACTACATAGCAATAGAAAAGATTAAGAGATAGTTCACAGAAAATTTGAAAATTATGTCAATAATAAATTACGTTTATGTCATTCCAAACCCCTAAGACATTCATTCATCTTCCAAATACAATTTAGGATATTTTTAATGAAATCTGAGAGCTCCTCCTTCTCTATAGACATCAATATACCGACTTGGTACCAAAAAAATAAAAA

Associated Phenotype:

Not determined