ZMP
COL25A1 (1 of 2)
Ensembl ID:
Description:
collagen, type XXV, alpha 1 [Source:HGNC Symbol;Acc:18603]
Human Orthologue:
COL25A1
Human Description:
collagen, type XXV, alpha 1 [Source:HGNC Symbol;Acc:18603]
Mouse Orthologue:
Col25a1
Mouse Description:
collagen, type XXV, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:1924268]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa12148 | Essential Splice Site | Available for shipment | Available now |
| sa14199 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12148
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074352 | Essential Splice Site | 74 | 291 | 4 | 17 |
Genomic Location (Zv9):
Chromosome 7 (position 60519908)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 59738873 |
| GRCz11 | 7 | 60044110 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTAAGGGAGAGCAAGGGGAATCAGGAGCACCAGGCCTGAAAGGTTCAAAG[G/A]TCAGTMTCTGCTTCTTAGTGAACCATGCATTAGGAAMTTAAAAACAATAG
Long Flanking Sequence:
GTATGTATGTATGTATGTATGTATGTATGTATGTCTGTATGTATGTGTATATATAATAATAATATAATATAATACAGTAAACAACATAATATATACAGATATAATATAATAATATATTACTACAGTCATATGTTCAGCATTGCTACTCAAATAAGCAGTCTTTTTGGGTGATTCACCCAAATCTATTCTGATCACTTACCTTTTATTGTTAAACAGTTGAAGAATAGAATAGTGTGCTATGAGTCTTTGACTCATAGCACACTATTTTTGTCTTATTTTTGTCACTATTTTTGTCTTTTTTTGTTTTCATCAGTTCTAAATACTAGTCTTACTACTCTTCCAGTGTCATAGACCATGATTAATCTAACCATACAGTAAACCACAGATATCTTATTGGGTTGTTTCTGAAAAAGCTACTACATAATAATCTTTAACTGTCTCCAAAAAATTTTAAGGGAGAGCAAGGGGAATCAGGAGCACCAGGCCTGAAAGGTTCAAAG[G/A]TCAGTATCTGCTTCTTAGTGAACCATGCATTAGGAAATTAAAAACAATAGAAATGTTTTTATAGTTTTGAAGCAAAAACAAGGGACATTTGACATGTGATAATATAACAAACAAAAATATGTTCCTGTCCCAAATTCGTTAACATGCTCTGTCCATTTTAAAATCACAGGGGGATTCAGGAGACAAAGGGGATGTGGGCCCAACAGGATCACAAGTGAGTAAAGTGTAAAATGATGTATTTTTTTTTTGACAGGCAAATTTAACACTGGCCTGAAAATTAGCTGTGTTGTGACCAAATTTATTTTATATTGGGTATCAAACTTCATCTATCTGTATTGTTAAGTAAAGAGTAAACTGACATGTTTATACTCCCAAATTTGCACTTTTTTTTTGCTGACACTGACTTAACTTGCACATGGTTACATTTGACTAAAAAACCAGAAAGACCAGAAAGAACAGGATTTATTGATTATCCACAAACACAGGGCATAATGCAATGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14199
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000074352 | Essential Splice Site | 89 | 291 | 5 | 17 |
Genomic Location (Zv9):
Chromosome 7 (position 60520123)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 59739088 |
| GRCz11 | 7 | 60044325 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACAGGGGGATTCAGGAGACAAAGGGGATGTGGGCCCAACAGGATCACAA[G/T]TGAGTAAAGTGTAAAATGATGTAYTTTTTTTTTGACAGGCAAATTTAACA
Long Flanking Sequence:
GTTGAAGAATAGAATAGTGTGCTATGAGTCTTTGACTCATAGCACACTATTTTTGTCTTATTTTTGTCACTATTTTTGTCTTTTTTTGTTTTCATCAGTTCTAAATACTAGTCTTACTACTCTTCCAGTGTCATAGACCATGATTAATCTAACCATACAGTAAACCACAGATATCTTATTGGGTTGTTTCTGAAAAAGCTACTACATAATAATCTTTAACTGTCTCCAAAAAATTTTAAGGGAGAGCAAGGGGAATCAGGAGCACCAGGCCTGAAAGGTTCAAAGGTCAGTATCTGCTTCTTAGTGAACCATGCATTAGGAAATTAAAAACAATAGAAATGTTTTTATAGTTTTGAAGCAAAAACAAGGGACATTTGACATGTGATAATATAACAAACAAAAATATGTTCCTGTCCCAAATTCGTTAACATGCTCTGTCCATTTTAAAATCACAGGGGGATTCAGGAGACAAAGGGGATGTGGGCCCAACAGGATCACAA[G/T]TGAGTAAAGTGTAAAATGATGTATTTTTTTTTTGACAGGCAAATTTAACACTGGCCTGAAAATTAGCTGTGTTGTGACCAAATTTATTTTATATTGGGTATCAAACTTCATCTATCTGTATTGTTAAGTAAAGAGTAAACTGACATGTTTATACTCCCAAATTTGCACTTTTTTTTTGCTGACACTGACTTAACTTGCACATGGTTACATTTGACTAAAAAACCAGAAAGACCAGAAAGAACAGGATTTATTGATTATCCACAAACACAGGGCATAATGCAATGAAAGAGCTTGGTAAACAAGTACAAGTACAAGTTAGTAAATTAGTGACTGCTATAGACAGTCTGTATGCAATAATAGTACAGTAAAGCAGTAAGTTCACATTTTGTGATGGAATACATTTTGCAAGTTTTTTTTTTTCTTTTGCTGTTCTATTCAATTTCTGTGTCTAAGTTTCAATAATAATGACATAAAGAAGCTACACAATAAGAACATCATTT
Associated Phenotype:
Not determined