ZMP
si:dkey-245g2.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
STX2
Human Description:
syntaxin 2 [Source:HGNC Symbol;Acc:3403]
Mouse Orthologue:
Stx2
Mouse Description:
syntaxin 2 Gene [Source:MGI Symbol;Acc:MGI:108059]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa15041 | Nonsense | Available for shipment | Available now |
| sa12655 | Splice Site, Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa15041
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000098525 | Nonsense | 64 | 309 | 3 | 11 |
| ENSDART00000132015 | Nonsense | 41 | 286 | 4 | 12 |
| ENSDART00000143020 | Nonsense | 40 | 189 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 45914653)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44228836 |
| GRCz11 | 8 | 44222255 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATCTCCTCCCTAGTGGATGAGGTGAAGAAGAAAKATAGTGTGATCCTTT[C/A]GGCCCCCAATCCTGAWGAGAGTAAGTCACCCTTATGCACCTTTAGTGAAA
Long Flanking Sequence:
GGAGTATATATATCATGCTATTATGCAAGAAAAAATCTAATGCAAGTCTGGCAATAAAGTATTGTGATGAAGGTCTTTTGAAAGCAGAGTGTAATGTGAGTAAAAGATTTTCAGAGGGTATAATGATTTTCTATAGGGACTGTATGCACTTAATTTATTGCTCTGAAAAAAATACTCTAAGGACAGTAATGATACTGATTAATAAAAACAATAACTAATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGGTGAGAACATGCATCCGTAGAAGTGTCCATCGAGAAGCCCAGTAATGTGAAACCTTAGCAAAAATACAAATTAAAACTCTGCTTTTACTTTTTTTTTTTTTAGGTTGAAGAGGTCAGACGGGTCATTGAAAAGATCTCCTCCCTAGTGGATGAGGTGAAGAAGAAATATAGTGTGATCCTTT[C/A]GGCCCCCAATCCTGATGAGAGTAAGTCACCCTTATGCACCTTTAGTGAAATATGAGCAAGTTTTACAACAGAAACAAGTAAGACCTAGTTTCTGAATGGTCAGGTTAAATAGTTTTGCTTGACAGTGCTCGTTAGCAGGTTTACAGTCACCATTTGACTTGAATTTTTTTTCATTCAAATGCTGAAAACAACTGTTTTTATTCATGGATATTCATATACATCCATACTCTATGTGGAGTGTTTCAATAATCGTCTATAGCAGTGGTTCTCAAACTTTTTTCACCAAGTACCACCTCAGAAAAAATTGGTCTCTCCAAGTACCACCACAATGACCAGTAATAAAATAAAGCAGCGAAGTTGGCCAAATTAAGCAGCTACAGCACTGCACAGTTCAAAAACAAGTCATATTCATATTTATACAATTTTGATAGATTTTGAAATATATGTTGCATGTACATATGACGTATTTGTAAAACTTTTTGAAATCTAAACATTAACTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12655
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000098525 | Splice Site, Nonsense | 121 | 309 | 6 | 11 |
| ENSDART00000132015 | Splice Site, Nonsense | 98 | 286 | 7 | 12 |
| ENSDART00000143020 | Splice Site, Nonsense | 97 | 189 | 6 | 8 |
Genomic Location (Zv9):
Chromosome 8 (position 45918936)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 44224553 |
| GRCz11 | 8 | 44217972 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCATAYTTTCATGCCAAATTGGTTAATTGTGCTTCTTTTCTATTTCAGTA[T/A]ACTAATTTATCGCATAAATTTGTGGAAGTAATGACGCAATACAATGAAGC
Long Flanking Sequence:
GCTGATTTGCTGCTCATGAAACATTTTTTTTTTCTTATGAATGTTGATAACACTTGTGCTGTTGAGTATTTTTTGTGGAAATTGGGAGTTTTATTTTTTATTATTAGTTTGAAATCTTTTGTAACAAATTCCTATAACTCTTGATTGATTTAACGGATCCTTGCTGATCAATATGATTTTGCTTTCAGAAACAAAAGAAGAACTAGAACAACTCACGGTGGAAATCAAAAAACATGCCAACTATGTACAGAAAAGCCTCAAATGTGAGTAGATTTAAAATTTGGAGTTTTGTTGCGTTTGGAAAAAGAAATGTGAAAGAAATCATCTGTTGTTGTTGTTAGCAATGCACCAGAGTCTGCCTTCAGATGAGCAGGTCAATCAAGCCTCAGTGGATGCACGCATTCAAAAAACACAGGTAATCATCTCTGCCTCAATTTTTTTCATGTACAGCCATACTTTCATGCCAAATTGGTTAATTGTGCTTCTTTTCTATTTCAGTA[T/A]ACTAATTTATCGCATAAATTTGTGGAAGTAATGACGCAATACAATGAAGCTCAAGTGTCCTTCAGAGAGAAAAGTAAAAGCAGGATTCAGAGACAGCTGGAAATCAGTAAGTCTTACAGTACATGTGTAACTTTGTTTTAGCGTTTTCAAGCACATTTAACCATGGTTTAATTAACTAGACCAGCGGCAAACTAAAGGGGTAAGGGAGTGCTTAAGGACAGATATATGAGAATTAATGGAGAAAAAGCATTCAAAAATAAATAACCAAACATTTTATTAAGATGAACAAACATGAGTATAAAGAAACAAGTTTGAAAAATTATAAAACATAATTGTAACATTATAAATAGAGTATTAAATATATTCAAATATTGTATTAATTAAATATTAATAATACTAAGTAATTAATCAGATGTAATTAAAGTTAGATGAAAATATTTGTGTTTATTGCATAAAAAGACTGACATTCAGTCTGAGATTTTTCAAATGTGTCACTATTT
Associated Phenotype:
Not determined