ZMP

ncana

Ensembl ID:

ENSDARG00000067820

ZFIN ID:

ZDB-GENE-051230-1

Description:

Neurocan [Source:UniProtKB/TrEMBL;Acc:Q75T39]

Human Orthologues:

ACAN, BCAN, NCAN, VCAN

Human Descriptions:

aggrecan [Source:HGNC Symbol;Acc:319]
brevican [Source:HGNC Symbol;Acc:23059]
neurocan [Source:HGNC Symbol;Acc:2465]
versican [Source:HGNC Symbol;Acc:2464]

Mouse Orthologues:

Acan, Bcan, Ncan, Vcan

Mouse Descriptions:

aggrecan Gene [Source:MGI Symbol;Acc:MGI:99602]
brevican Gene [Source:MGI Symbol;Acc:MGI:1096385]
neurocan Gene [Source:MGI Symbol;Acc:MGI:104694]
versican Gene [Source:MGI Symbol;Acc:MGI:102889]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa33063	Nonsense	Mutation detected in F1 DNA	Not yet available
sa15838	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa33063

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000097691	Nonsense	323	1125	5	16

Genomic Location (Zv9):

Chromosome 2 (position 57630445)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	59459254
GRCz11	2	59550675

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCTCTGTGGGCCCCCGGGGGTCTCAGTGTCCCAATGAAGAGCCAGGAGTC[A/T]GAAGAGTTTCTCCTGCAGAGCTCAGCAACGGGACGAAGAGATTCGATGCT

Long Flanking Sequence:

AATAAATAAATAGAGAAAAATAAAGCTAATAATTGAATAAAAGAAACAAATAAACATTAATACAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAACTTATTACTGATCAGTATCAATCACAGCATAGGAGTCATTCAATGTGCTTTCACACACAATAATCCAGTTTGTGTGTTGATGTTTTATTCATGTGTGTGTTCCTCCTCCAGGTGAAGTGTTTTCCTCATCAGTGCCTGATAAACTCACTCATGCTGAAGCTGCGGCTCACTGTGAGTCTCTGGATGCTCGTCTGGCCTCTGTCGGGCAGCTCTTTCTGGCCTGGAGGTCTGGACTGGAGCACTGTGGCCCGGCTTGGGTCTCTGACGGGACACTAAGGGTCTCTGTGGGCCCCCGGGGGTCTCAGTGTCCCAATGAAGAGCCAGGAGTC[A/T]GAAGAGTTTCTCCTGCAGAGCTCAGCAACGGGACGAAGAGATTCGATGCTTTCTGCTATAGAGGTACAGCTGACGGCACTATCCAGAGGAATTATTTAGATTATATATGTACAGTTGAAATCAAAATTATTGTGATTTTATTTTTCAAATATTTCCCAAATGATGTTGAACAGATTCAGGAATTTTTCACAGTATTTCCTATCATATTTTTTCTTCTGGAGAAAGTCTTATTTGTTTTATTTCGGCTACAATAAAAGCAGTTTAACACTATTTTAAGGTCAATATTATTAGCCCCCTTAAGCAATATTTGTATTGGATTGTCTACAGAACAAACCACTGTTATACAAGGCATTGTTAGGTGGTTGCTAAACAGTTGCTAAATGGCAATGCTCATGTACATGTTTGATCAAATGCTAACACTTAGTAGGCATTTCTAGCATATGTTATTGCACTTAGATAATCATTCATAGCATGTAGCTAATCGTTATTAGCACTTGGCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa15838

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000097691	Essential Splice Site	903	1125	11	16

Genomic Location (Zv9):

Chromosome 2 (position 57676686)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	59413013
GRCz11	2	59596916

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTTTGTGTGYCTGTGTTTGCCCAGCTACAGCGGAGACCGAWGTGAGAGAG[G/A]TGAGAAAACAACTCGTCCATTATMACATCACACTCCAAATTAATGAGTTT

Long Flanking Sequence:

AACTAAGTTGTCCGTAGTGTATGTGTGTGTGTGTGTGTGTGTGTGAAAGAGTGTGTATGGGTGTTTCCCAGTACTGGGTTACAGCTGGAAGGGCATCTGCTGTGTAAAACATATGCTGGAATAGTTGGCGGTTCATTCCACTGTGGCAACCACTGACCCCTTTCTCTTGTCATTCATGTTATATTTGCATTACATGTACTGGAAATGTAATATTTAATTTCAACTTAATTTCGATTACCAAATAGGTTAGTTTGGTTAACATTTGACTTTATAATAGCAGTACTAAACAAGTGTATGTGCAATTATTAAATGTTTTGTTTTTATACACAAAAATGTGTATAATTCTGTTCATATGAGTTAATATTTGAATGTTTTTGTTCTGTCAGATGTGGACGACTGTCAGTCGAACCCCTGTGAAAACGGCGGGACCTGCATTGATAAAGAGGACTCCTTTGTGTGTCTGTGTTTGCCCAGCTACAGCGGAGACCGATGTGAGAGAG[G/A]TGAGAAAACAACTCGTCCATTATCACATCACACTCCAAATTAATGAGTTTCACATTTGAGAGTTTCCCTGCTGACAAAATCCAACTTAGATCAGCTCATAAGAGCCAGGCGGGAAGTTTGTGGAAGAGCATGTACAGGAGATACAGCTGAGGGCTCATTCCCCCTCCTGTGAATTTCTTTTTCAAATATTTCCCAAATGTTGTTGAACAGATCTAGGAATTTTTCACAGTATTTCCTATAATATTTTGTCTTCTGGAGAAAGTCTTATTTGTGTTATTTCAGCTAGAATAAAAGTGGTTTTTAATTTTTTTTGAGGTAAAGTTTATTTATGAACTAATTTCAAGAGGATCACATGCTTATGATTGCTTGTGGCCGGTCCCATATTATTAGACTGGCTTGTGAAAGCAAGCCAGACTACTGAAATCCTATTTTTCTTCTGAGACTAAAAATCAAACACTATCTCCTCCTAGAGCTTCCGAGCAATGACCACCAAGCTCACA

Associated Phenotype:

Not determined