ZMP
A2CE81_DANRE
Ensembl ID:
Description:
Novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3) [Source:UniProtKB/TrEMBL;Acc:A2C
Human Orthologue:
MSH3
Human Description:
mutS homolog 3 (E. coli) [Source:HGNC Symbol;Acc:7326]
Mouse Orthologue:
Msh3
Mouse Description:
mutS homolog 3 (E. coli) Gene [Source:MGI Symbol;Acc:MGI:109519]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa203 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa203
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092285 | Nonsense | 42 | 957 | 1 | 21 |
| ENSDART00000141930 | Nonsense | 42 | 893 | 1 | 20 |
Genomic Location (Zv9):
Chromosome 5 (position 52935263)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 50602459 |
| GRCz11 | 5 | 51249052 |
KASP Assay ID:
554-0111.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTCACTAATGCAAGCGATCGGGCTCAACCAACTGAGCAGATTAACTG[T/A]CAAGACCGACGCCATGAGGGCAGAGGGAAGGTAAGAGAGAGAGATAGAGA
Long Flanking Sequence:
CATTGAAGTCTAGCATCTTCACATTGGCACACTGTCTTGAGTTTGATTAAATGACTAGTGTCCTGGGAGCACTGTACAAATGTGGCGGCGCTATTGACGCATGGTCAGGGTCCGTTTGCGATATTTAGTGTGTATACCTATATACTACAGCAGTGACTGCGTAAAATGTAGCGCATCTTTCACCATCTGCAGTACATTTGAGAATCCGCGTGTGCAACACAGTGCATACGTCATCAACGCGCCAACCCGATCAGCTGCAGCAAAGCTGTAGTCTCTCTTGGAGACTATTTTTAATCATAAGAGTTTTGGCCGGTTTTCAAACAAGCTCCTGTTGCAGACCAAACGGTAAAGATCTGATATCGTTAATGTAGTAAAATGCACACAGCTGTCAGACGCGTGTCTGCCTCCAAATCCTCCAAGAAATCCAGCACTCAGACAACTATCAGCAGGTTCTTCACTAATGCAAGCGATCGGGCTCAACCAACTGAGCAGATTAACTG[T/A]CAAGACCGACGCCATGAGGGCAGAGGGAAGGTAAGAGAGAGAGATAGAGAGAGAGACAAAGAGAGCAGTAATAGACACAGACAGCTTATTTATGTGGAGATATAGACTGCAAGGGATACTGTAGTTCACCACAAAAAAATAAGATTGACAGTATTCACTCACCTCAAGTGGTTCCAAACATTTTTAGTTTCTTGAATGCTGAATACCTGTAACTCTTGACTTCCAAAGTTACAATAACAAATACTATTGTAAGTTAGTCAACAAAGGTTACAGGTTTCCCGCCTTGTTCACAACATGTTGAAAAGATTGTTTAACGAAATGAGTCCTTAGTGGGGCATTCTACCAGAAACGTACATTATCTGTCCCTGAAATAAAGACATAAATACAGTGAATACATTTTTTTTTAATCCCAAAAAATGTCTAAAATGGACTGATGGTTGATTCATGTGAGTGGTTCTGTAAATGAATGTCGGTTCTTAGATTTTTTTTTCTTTAAAATG
Associated Phenotype:
Not determined