ZMP
si:dkey-223d9.2
Ensembl ID:
ZFIN ID:
Human Orthologue:
C20orf160
Human Description:
chromosome 20 open reading frame 160 [Source:HGNC Symbol;Acc:16153]
Mouse Orthologue:
BC020535
Mouse Description:
cDNA sequence BC020535 Gene [Source:MGI Symbol;Acc:MGI:2385159]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29876 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa37618 | Essential Splice Site | Available for shipment | Available now |
| sa6724 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa29876
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091899 | Nonsense | 123 | 613 | 4 | 10 |
| ENSDART00000140455 | Nonsense | 123 | 147 | 4 | 4 |
| ENSDART00000144533 | None | None | 100 | None | 3 |
Genomic Location (Zv9):
Chromosome 23 (position 9161764)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 9119905 |
| GRCz11 | 23 | 9054875 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACAGGACTGTATTCTCAGTCTGTCTGCTCGCTGTCTGCTGCTTACCTGG[A/T]GAGACAATGAAAAACTGCTGCTGAGGATCCCTACACATGAAATTGCTGCT
Long Flanking Sequence:
TTTATTCACTCTAAAGGTTTTTAAAGAGGGTTGTGCTTGTTATTGTGTATATGTACATTTTATTTTACAAAACAAAAATCAATTTGGCTGTTTACAGTATTTTCAGAATTACAAAGTGTTAAAAAGAGCTTCTCTAAAAAAAAAAAAAACATTTTTGGTGTCTAATATGTTCACTTCATCCATTTTCAGTGTTTCTGTGCTGAAAGTATATATAAATTAGCATATTACTAAATAATACATAATTTGCATATTTAAATATTATGTTTTAGAAAATGTGTAATACAAAAAAAGTTTGCAATTCTTAATGTTATCAATCACCCTTTTTACCTGTAGTGCTTTGCCTTCACATAATTTAAAACAGCAAGCTTCTTCACAATAAAATTTTGCACATTCTACACATTTCTGTATGCCTGTAGAAGCTGAGGGTTTTACCTCTGAAGACCAGTGTTGAACAGGACTGTATTCTCAGTCTGTCTGCTCGCTGTCTGCTGCTTACCTGG[A/T]GAGACAATGAAAAACTGCTGCTGAGGATCCCTACACATGAAATTGCTGCTGCCTCCTACCTGCGGGATGATGCACTGCATCTGCTGGTGCTCAAAACTGGTTAGTAAGAGTGAAATGTAAACTGTAAAAAAACTTTCTGCCTTAATTTTGTGGGTTTAAATTGACAAAATGGAATCAGATTAACTTTTCAAAACATACATCAGTTACATAAACTAAAAATACGAAGTTAAACTTTGTCTTAGTAAATAGTTTAAATATAATTAACGTATTAAGATGTTAAAGTAACAATAAACATTTGTTGCTGTGTTTTTTTTTTTTTACATTGTGGAGAATGTTTAAGATATACCAGAGCTTACCCATGGTTAAATGTTTCTGCCAAATGCAGAAATGTTTACCCAGAAGATTTAATTCACTCATCATTTACACACCCTTCATGAGTTTCTTTCTTTCTGTTAAACACAAAAGAAGATATGATGAAGAATGTTGGGAAAAAAGTAGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37618
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091899 | Essential Splice Site | 403 | 613 | 6 | 10 |
| ENSDART00000140455 | None | None | 147 | None | 4 |
| ENSDART00000144533 | None | None | 100 | None | 3 |
| ENSDART00000091899 | Essential Splice Site | 403 | 613 | 6 | 10 |
| ENSDART00000140455 | None | None | 147 | None | 4 |
| ENSDART00000144533 | None | None | 100 | None | 3 |
Genomic Location (Zv9):
Chromosome 23 (position 9169871)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 9128012 |
| GRCz11 | 23 | 9062982 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGCGGGTTTTCACTACACCATGCCTGACCGCTATTGGCTGCAGAGGAG[T/A]AAGTGGTGTCTACATTGCTCATTAGAAGCTAGTTAGCTGTAACCAAGCTA
Long Flanking Sequence:
GTATATTTAAGTTGCAAAGAATGTGTTTGTCCGTGTGTGTTTAAGTGATTATGAATGCCTTTAGCTGTGTTCCTGCGCTGGCCCGAGCTGACGAGATGAGCACTGTCAGCTCTGATGTAAACAGCGCTCAGAGTAGACTCCCCTGTGATGTAATGCCCACACTTATGTAACAGCATGCTGTGTCAGTGATCTGTGAGTGTGCCTGCGGACATTAATATGGATGGGATTGTGCTGACCCACATTGTAGTCTGTCTGCTTCTGTGGGTGTGCAAAACGAGTGTCTGCAAGAGAGACAAAAGCTAAAATTGCATGTATCCTTATATAGCACTGACTAAGATTAATTCTTATATTGATCACACACACACACAGGATGCTGCAGAGGAGTATTGCGCCCTCATCTGTCAGATGTTTCAAATCATCTATGGACATCAGACTATCGAGTGTGTGGACAGGGCGGGTTTTCACTACACCATGCCTGACCGCTATTGGCTGCAGAGGAG[T/A]AAGTGGTGTCTACATTGCTCATTAGAAGCTAGTTAGCTGTAACCAAGCTACATGTATACAGTGGAAAGAGTCTTTATAACAGTGGTCCCCAACTGCTTTGTTTTGAACTAAAAATAGACCACGTGTCGGTTCAGATCTCGTCACAGAACAAAAAACAATACCAAAGGCAAATGGTAAAATACAACCAACTGATCATGTATAGTTATAAGAGCAGTATAAATAGAATAATGTAAAAAAAAATTCCCATCTGTCATATTAATTATTAATCATGGTACATTTTAGGCTTTTGATATACAGTGTGTATAAAGACACTGTAAAAAATGTTGGGTTCCAAACAAATTGATTAAATTGTTATTATTGTTACTATTATTATTATTAATATATTATTATTATTATTATCATTATTATTATCATTATTATTACTATTATTTTGATTACTATTATTATTATTACTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6724
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091899 | Essential Splice Site | 403 | 613 | 6 | 10 |
| ENSDART00000140455 | None | None | 147 | None | 4 |
| ENSDART00000144533 | None | None | 100 | None | 3 |
| ENSDART00000091899 | Essential Splice Site | 403 | 613 | 6 | 10 |
| ENSDART00000140455 | None | None | 147 | None | 4 |
| ENSDART00000144533 | None | None | 100 | None | 3 |
Genomic Location (Zv9):
Chromosome 23 (position 9169871)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 9128012 |
| GRCz11 | 23 | 9062982 |
KASP Assay ID:
554-4241.1 (used for ordering genotyping assays)
KASP Sequence:
AGGGCRGGTTTTCAYTACACCATGCCTGACCGCTATTGGCTGCAGAGGAG[T/C]AAGTGGTGTCTACATTGCTCATTAGAAGCTAGTTAGCTGTAACCAAGCTA
Long Flanking Sequence:
GTATATTTAAGTTGCAAAGAATGTGTTTGTCCGTGTGTGTTTAAGTGATTATGAATGCCTTTAGCTGTGTTCCTGCGCTGGCCCGAGCTGACGAGATGAGCACTGTCAGCTCTGATGTAAACAGCGCTCAGAGTAGACTCCCCTGTGATGTAATGCCCACACTTATGTAACAGCATGCTGTGTCAGTGATCTGTGAGTGTGCCTGCGGACATTAATATGGATGGGATTGTGCTGACCCACATTGTAGTCTGTCTGCTTCTGTGGGTGTGCAAAACGAGTGTCTGCAAGAGAGACAAAAGCTAAAATTGCATGTATCCTTATATAGCACTGACTAAGATTAATTCTTATATTGATCACACACACACACAGGATGCTGCAGAGGAGTATTGCGCCCTCATCTGTCAGATGTTTCAAATCATCTATGGACATCAGACTATCGAGTGTGTGGACAGGGCGGGTTTTCACTACACCATGCCTGACCGCTATTGGCTGCAGAGGAG[T/C]AAGTGGTGTCTACATTGCTCATTAGAAGCTAGTTAGCTGTAACCAAGCTACATGTATACAGTGGAAAGAGTCTTTATAACAGTGGTCCCCAACTGCTTTGTTTTGAACTAAAAATAGACCACGTGTCGGTTCAGATCTCGTCACAGAACAAAAAACAATACCAAAGGCAAATGGTAAAATACAACCAACTGATCATGTATAGTTATAAGAGCAGTATAAATAGAATAATGTAAAAAAAAATTCCCATCTGTCATATTAATTATTAATCATGGTACATTTTAGGCTTTTGATATACAGTGTGTATAAAGACACTGTAAAAAATGTTGGGTTCCAAACAAATTGATTAAATTGTTATTATTGTTACTATTATTATTATTAATATATTATTATTATTATTATCATTATTATTATCATTATTATTACTATTATTTTGATTACTATTATTATTATTACTGTTATTATTATTATTATTATTATTATTATTATTATTATTATTAATA
Associated Phenotype:
Not determined