ZMP
si:dkey-33c18.3
Ensembl ID:
ZFIN ID:
Human Orthologue:
SPATA13
Human Description:
spermatogenesis associated 13 [Source:HGNC Symbol;Acc:23222]
Mouse Orthologue:
Spata13
Mouse Description:
spermatogenesis associated 13 Gene [Source:MGI Symbol;Acc:MGI:104838]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37887 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa13727 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa37887
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091252 | Nonsense | 337 | 1251 | 2 | 14 |
Genomic Location (Zv9):
Chromosome 24 (position 22496243)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 21743121 |
| GRCz11 | 24 | 21888295 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACATTTGCAAAAGCTTGTCGGTAGTTTAACTGACCTCACAGTCAAGCGC[A/T]AAAACATTGCAAGCCCTTCTCCAAGAGTGCCAGTGTCACCCCTTAGTCAG
Long Flanking Sequence:
AAAAAGTGTTAAATGGGACATCTCGAACCAGAAAGACATCTTCGGTTTCAGATGAGGATGATTGTGAGGAGGTGTGTGGGTTTCAGAGGAATTCACACTTTTCTCAGAGTATCCGCAAGGCTTATGGGGCAGGACGGATATCAATGCTTGACATGGTCAACAAACAGAGCCTGTCTACTGCTGAGCCAGACCCCGTCAACACTGTGGAATCCACAGAACCTTGCAATAACCAAGACACTCAAGGAAATGTCAAGGTTCTCAAAAGACTAAGCAAAAGCGCAGATAATCTCCACGTTTTTAAGACTCATTTTAGACGCAAAGTTGCCACAGCTGAGCCACAAAACCCAGAATGTTCCAGCACTGTAATGCTTCAGAGGACCTCCAGCTCCTCATCGGTTGACTTGCAGGAACATGTTTTAGGTAGCCATCAAAGCCCCATGAGAACACGAGGACATTTGCAAAAGCTTGTCGGTAGTTTAACTGACCTCACAGTCAAGCGC[A/T]AAAACATTGCAAGCCCTTCTCCAAGAGTGCCAGTGTCACCCCTTAGTCAGCTACATGACGACTACTCGCGCAGAACTCCTTGTGTCCCCACTAGCGGGCGCCAACGTAGGCCTTCGCCTGTACCCACCAAAACCCAGCAGGACAGTACTTGCCAAACCATTCCAATTTTACACCCTGCTCCCTCTTGTCCTGCAGTCTTTATCTCTGACCTGGATGACTCTCTGGAGCCTCCTAGCAAAACCACAGCCCTTATAAGTGACTATGTACAGATGGCCGTGTCCTCATCTGAGCTGCATATTGGTGACTCGGCTTGTCCACCGGAAAAATACTGTGAACCTATGGAGTGCCATCAAAATGGATTAAATGATCACTACTCTCAAATTCCCCAGCAGTGCTCAAGCCCTTGTCTGAAGCCAACAGTCAATGGCAATGATGTTAACTTGCAGGTAAGACATTCCTAAGCACATTCCTATATGTATACAGAAGGGTGAGTGTACAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13727
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091252 | Essential Splice Site | 700 | 1251 | 5 | 14 |
Genomic Location (Zv9):
Chromosome 24 (position 22487201)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 21734079 |
| GRCz11 | 24 | 21879253 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGGCCTGGATCGGATGGGGCGTCGCAAAGGGCGCAGAGTGCTCAGTGG[T/C]GAGTGTGATTTTTATTTATAAACATGAACATGTARTTGACTTGCAAATGT
Long Flanking Sequence:
TTTCAGAAATTCAATAATAAGAAACACATGTTTGGTGATCTAAAGAGTAATAAGGTCGCATTAGGTGTCTCCCTTCGGGTGTAGCAGTTTATGAGGAGGTTTAAAAGATCTTTCCAGGCCCTTTTGTTAGTTCTATAGCAGCAATGTGATTCATGTGCTATATTGAAAGAAATTTCAGCTTACAGTTTAATGTTATGCTTGTTAATGTTTTGAGCTGAAGTGTCAGTGTTTATTATGTCACAGGTCATTGTCCTGCTCTGAACAGTCAATGAACTCTGAACATGAAGTCTGTTGAATGGTGGGCTCCATTTAAGGCTGCAGATTGAAAGTCTAATCTATTCTGCTTTGTTTCAGCCGGTTTGTCGTCCTCCAGTGCCCTCTCACAGGGTGCCTCCATACCGAGCAGTTTCTGCCCGTCTGAGACCCTGCGTCTTCTCCCAAAGCACACCGATTGGCCTGGATCGGATGGGGCGTCGCAAAGGGCGCAGAGTGCTCAGTGG[T/C]GAGTGTGATTTTTATTTATAAACATGAACATGTAGTTGACTTGCAAATGTGAAGTGAGATTATTTTAATGGAAAGGGAAGGTTAAGTTTTTTTAATGTTTTAGACGGCAGCTCTGATCCAATGCTTGAGGACAGTGTGAGTGAGGAGGATGGCAGCTTTGAAGAACTGACTGAAGGAACACCATATCTTCAACCAGAAGTCGATCTTTTTACTCTCAATCAGGTTGGCTTTTTTGAATGCTTGACATATTTTGGTTACTGTTGATGATATATTGTTTATTTATATACTTTGGCAACACCTCTAAGATGCTTCAAATTACCTACCTGCAAGGCTACCTGAAAAACTATGGGCAAGTGTACCAACTTATTGTTTTAAATGCAACATGTGGTCATACCAAATGATGATGATTATGAAGCTTTTATTTGTCACATACATTTTTACATGTAGCGAAATTGGACCCCCCTGACCATACACAAACATCACACATTTCAGGGTAAGAC
Associated Phenotype:
Not determined