Busch Lab

ZMP

cpne4

Ensembl ID:
ENSDARG00000062754
ZFIN ID:
ZDB-GENE-060503-926
Description:
Novel protein similar to vertebrate copine IV (CPNE4) [Source:UniProtKB/TrEMBL;Acc:Q1LUM8]
Human Orthologue:
CPNE4
Human Description:
copine IV [Source:HGNC Symbol;Acc:2317]
Mouse Orthologue:
Cpne4
Mouse Description:
copine IV Gene [Source:MGI Symbol;Acc:MGI:1921270]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa16481 Essential Splice Site Available for shipment Available now
sa23496 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa16481
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091090 Essential Splice Site 510 553 14 15
ENSDART00000146929 Essential Splice Site 511 554 14 15
Genomic Location (Zv9):
Chromosome 19 (position 18741597)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19586832
GRCz11 19 19159785
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGTCCTGAGGGACATTGTGCAGTTTGTGCCCTTCCGCAACTTCAAACATG[T/C]AAGTAAAATATGGTCGGAACCTAATATGGTCATACNNNNNNNNNNNRTTTTATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAT
Long Flanking Sequence:
CCAGAAAGTTGCAAACTCTGCTTCCGAGGAGATGCACACCAAAGAAGCCATGGTTAGTGTGAGAGAGAAAAAACACAGTTTTATAAACAAGCACAATATAAATCATAATCAGGATTATTCTTCTATTGTCAAATTAAGAAAGGTTAGAGTACACTCAAAATAATATAAATAATGTTATTAAATAATATTAAACAATAAATAATACAATTTTGCTTGTTACAATAGAGATTTTAGAGTCTCGATTGTTTTCCTAATTACCTAGGAATACTTCATACTGCTGATCCTGACGGATGGAGTGATCACAGATATGGCAGACACACGAGAGGCGATTGTTCATGCGTCACACCTGCCCATGTCCGTCATCATCGTCGGCATAGGAAGCGCAGACTTCAGTGACATGCAGATGCTGGATGGCGATGATGGAATCCTCCGCTCTCCAAAAGGAGAACCGGTCCTGAGGGACATTGTGCAGTTTGTGCCCTTCCGCAACTTCAAACATG[T/C]AAGTAAAATATGGTCGGAACCTAATATGGTCATACATTTTATTTTTTTATAAATCTAAATAGGCTGAATATTTCTGTTTGAATATTCTTAGTTACAACATCTGTGATAGCAAAGATGATACAATTTATCACACTTTTTTATCATTGAAACATTTGCAATTTTTTTTATGGAAATAAAAACTTTTTTCATGTGACCCAGATGGGAGTGAGGTATAGGGGGTGAGTGTAGCGGAGGCCAACAAGTGAAGTGCTATGCAGGTTAACCTGACTCTTCTGAACTCTAAAGCGGCTCTAGTGACAGACGCTTGAGGGCATGGTCTTTAGCCTCCTTGCGAGAGCAACCGACTCGCATGTGGAATGTCGCCGGTTCGATCCCAGAGCAAGTTGGATGGTGTAGGACCAGCGGGGGTTACACTTCACTCTCACGTTTGTCCATAAGTGAAAGGATGTCATAAGCACTTCAATAATCACGCGCTCTTTATTATCATGAACTCAAGAAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23496
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000091090 Nonsense 545 553 15 15
ENSDART00000146929 Nonsense 546 554 15 15
Genomic Location (Zv9):
Chromosome 19 (position 18754796)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19600031
GRCz11 19 19172984
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGATTACTACAATGGAAAAGGCATCAAGCCCAAAGGCCTGTCAGACTA[T/G]GAGTCTTCCAGGGCTTTTAGTCCCTGAGCTACGCAAAGCCATATAGCAAC
Long Flanking Sequence:
GTACAGGGCTTCATGGCCAATAAACTCCAGAGAAGGGTTTTGTTTGGCTTTTTCCTTCACAGTTAAGAAGCCGACTGTAAGGAAACTTGCTACCTCAGGTCAACTTCTGCAATATCACACAATTCATAAATATAGCGCAGCTCTGGAAGTGTGAAGTTGGCTGTCCGATACAAATGCTTCGGCGAGAAACAGAGCGTGTGTTTGTGTGTGCGCACGTGTTTATTTTTAGCTCTGTCCTACTGTGTTTTCTCCAGTCTGTCTCCACTTGTTTTGCGGACAGAGAGAAAAAGGAGTGACACCTCTCTTGTATCACCTACTCAAGCAAAAGAGAGTGTGAGATTTCATCTATATTCCTTTTTCTCTCTCATCCTTCCCTCTGTCTTTTCTTCCACACAGGCCTCTCCTGCAGCGCTGGCTAAAAGTGTGCTGGCTGAAGTTCCCAATCAAGTGGTGGATTACTACAATGGAAAAGGCATCAAGCCCAAAGGCCTGTCAGACTA[T/G]GAGTCTTCCAGGGCTTTTAGTCCCTGAGCTACGCAAAGCCATATAGCAACCTCCGTGTCTCAGCTTCAAGATATCTTCATTGATTATTTCAGAGCTTGCTGCATCAGTATAGGTATTAACAAGCAGGTCCATCCAGCAGTTCCACTAGTGTTTGGTTTTTCAGTAGCATTGGCATGTTTCTTCTTACACAGCTGTTAAACTGGGGTCCCACTAGACTTTTCATCCCACCGACTTCACATTTATATGGGAGAAAGACGCAAATCCGTTTAAATACATTACATATTTTGCTTAATTGCAAAGCTTGTTTATTGAACTCTGACCTGTGACTTCTCATCATGTGAATTTATGAGATCAATATGAGGTCAAATTATGACCTCTCGGTAAAAAATTTAAAACATGTAGGAATCGCTTGTTTTTTGCAGTGTCACACTGTATTATTATTTTATCCTACCCCTTTTCACCATACTGTCTGAATTCACCATCCGCATGTCAAATCAAAT
Associated Phenotype:
Not determined