Busch Lab

ZMP

nrxn3b

Ensembl ID:
ENSDARG00000062693
ZFIN IDs:
ZDB-GENE-070206-10, ZDB-GENE-070206-10, ZDB-GENE-070206-10
Description:
neurexin 3b [Source:RefSeq peptide;Acc:NP_001073516]
Human Orthologue:
NRXN3
Human Description:
neurexin 3 [Source:HGNC Symbol;Acc:8010]
Mouse Orthologue:
Nrxn3
Mouse Description:
neurexin III Gene [Source:MGI Symbol;Acc:MGI:1096389]

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa36960 Nonsense Mutation detected in F1 DNA Not yet available
sa43379 Nonsense Mutation detected in F1 DNA Not yet available
sa12447 Nonsense Available for shipment Available now
sa7476 Missense Mutation detected in F1 DNA Not yet available
sa15937 Essential Splice Site Available for shipment Available now
sa11015 Nonsense Available for shipment Available now
sa19226 Nonsense Mutation detected in F1 DNA Not yet available
sa16685 Nonsense Available for shipment Available now
sa44933 Nonsense Mutation detected in F1 DNA Not yet available
sa32273 Nonsense Available for shipment Available now
sa36961 Essential Splice Site, Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa36960
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 135 1407 1 22
ENSDART00000090934 Nonsense 135 1404 1 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 135 1687 1 23
Genomic Location (Zv9):
Chromosome 20 (position 5596348)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5520047
GRCz11 20 5564444
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGGCGTTGGACGGAGATTCTAAGGTGGATGAGGTGAGACCACAAAGG[C/T]AGTTCATGAAAATTGTCAGTGACCTGTATCTTGGAGGTGTCCCTCAAGAC
Long Flanking Sequence:
CTTAAATGACCTCCACCATATTTTCCTGAAAATAGCATAAAGGAGTTTTATTGTTTTTTATTGCTCAAGGATCCCTTGTAGCATACGCTCTGGCTACCATGCCTCCCCATTGCCAGCCTCATTGTGTACTCTTGCTGCTCAGCACCTTCTTGAGTCTTGGTTTGGGCCTGGAGTTCACAGGTTCAGAGGGTCAGTGGGCACGCTATCTTCGCTGGGATGCCAGCACCAGAAGTGACCTCAGCTTTCAATTCAAAACGGCAATATCAGATGCTCTGGTTCTCTACTTTGATGATGGAGGATATTGTGACTTCCTGCTTCTGAGTATTGAGGATGCCAAGCTCAAGTTGCATTTTAGCGTGGACTGTGCAGAAACCACTATAACCTCTGACAAGATGGTAAACGACAGTCACTGGCACTTTGCTACAATCAGCAGGCACAACTTGCGAACCGTGTTGGCGTTGGACGGAGATTCTAAGGTGGATGAGGTGAGACCACAAAGG[C/T]AGTTCATGAAAATTGTCAGTGACCTGTATCTTGGAGGTGTCCCTCAAGACATTCGGACATCTGCCCTAACACTACCAGCAGCTAAAGAGATGCCACCATTCAAGGGGATTATTACAGACCTGGGTTACGGCAATAAGGTTCCAACACGACTTGGGAGCCAAAAGGTCCGGTTAGAGATGGAAGGTTTTTGTACAGAGAACCCCTGTGAAAATGGAGGCAGTTGCAGCATGGCTGATGGTGAGGCTTACTGTGACTGCTCTAAAACAGGATATGCAGGACGGTACTGCAACGAAGGTAAGATTTTTAAAATTAAATTAAATTAAATCAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAATAAAATAAAATAAAAAAAATAAAATAAAATAAAATAAATTATTAAATTAAATTCTCTTTGTGTGTAAATTGTGTACATTTCTGTTTTTATTTAGCTGATGAGTCTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43379
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 301 1407 4 22
ENSDART00000090934 Nonsense 301 1404 4 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 301 1687 4 23
Genomic Location (Zv9):
Chromosome 20 (position 5705940)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5629639
GRCz11 20 5674036
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTTGGCAACGCAATGGTCTGATCCTCCACACGGGCAAATCGGCTGACTA[T/A]GTTAACCTGGCATTGAAGGATGGCGCCGTTTCATTGGTCATCAACCTGGG
Long Flanking Sequence:
CCACCAAACATGAAAATAAAAGTAACGAGTCTGATTTTAAAATGTAAGAAGTATAAGGTACAGATATTTGTGTAAAAATGTAAGGAGTGAAAGTAAAAAAGTTGTTGGAGTACTGATACTAGAAAAATCTACTTAAGTACAGTAACAAAGTATTTGTACTTTGTTACTTCCCATTTCTGCAGGAGTGCAATACATAGTATAACCACTGGGTGTCCAACTTCTTACCGCACCTTTAAATGACTTGTCCACCTCTTCCAAAGACCAACATCCCTGTTATTTAACAAATGTATGTCAAGTTTTACTATCAAAATCTAATTAATTTTTTTTTCCTTCTTGTTTTCAGCACGGGAGGAGAATGTGGCAACTTTCCGAGGCTCGGAATACTTTTGCTATGACTTATCTCAGAATCCTATCCAGAGCAGTAGTGATGAGATCACTTTGTCCTTCAAAACTTGGCAACGCAATGGTCTGATCCTCCACACGGGCAAATCGGCTGACTA[T/A]GTTAACCTGGCATTGAAGGATGGCGCCGTTTCATTGGTCATCAACCTGGGCTCAGGAGCCTTTGAGGCAATAGTTGAGCCCGTCAATGGAAAGTTCAATGACAACGCCTGGCATGACATCAAAGTGACACGCAACCTGAGACAGGTAATCACGACACAACAGCTGCAATGTAGACTACTCACATATAGCTAGCTGGAGAACTAGTCAATGTTTTGTTCAATTTTATTTGCTTTGAAATTTGATAATCTTCCGCTATTTATTATTACATTTAATTGCACTGTTATATGCTAACAATATTCTTAATAACAAAAGGGGTCGTTTTTCATGCGTTTAAGCTAATTTAATTGCACTGTATTTTGTTAACATGTCTCATTGGATATGTTCTGACTTTGTTCTGAGATCTTGAAGCCTTTTCTTTTAAGATTATTTACCAGTCAATTCCTTTCAGACTTCAATTGCTTTCAGTCTTTGCTCTGAATCTCTACAGCTGTCAGCAAAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12447
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 363 1407 5 22
ENSDART00000090934 Nonsense 363 1404 5 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 363 1687 5 23
Genomic Location (Zv9):
Chromosome 20 (position 5710324)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5634023
GRCz11 20 5678420
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTTGAAAGCACTCAGGCATTGGACACGCTATGGTAAAMAAACTACATTG[T/A]CTGGTAGATATCATTCTTATTGTCCTTTTTTGGTTTGCCGTGTGTCYCTC
Long Flanking Sequence:
TAATAAAGGTTAAAAATAACCCAACAAATGCATCAGATATTTAACCTAACTGGTTGAGTTATTAATAAGTAACCTAATAAAGGTTAAAAATAACCCAACAAGGCACCAAATATGTTTAACTCAACCATTGGGGTCAATAAATAACTCAGCGTTTTTTAGAGTGTACTGAAATCTAAAAGTCAAAAACTCCTGCCCCCAGTGGAATATCATGTCCTGCTCTTTTCTCTCTTTCCTTTCCTGTTTCTCAAATCTTGGGAAGAAACAGTTTTTTTTTTTAATTTCGAGACCAACACTAATCCATTCATGGGTCATTTTTATTACTAACGTACTTCTAACCAACTAATGTACTAACACTCTATATCTTCATCGTTATTTTCTTTCTCTTTTAATTTCATCCATTAACAACCGTTCTGTTCACTATTGTTTTGATTTCCTTTCTTCCCCCCTTCTTCTTGAAAGCACTCAGGCATTGGACACGCTATGGTAAACAAACTACATTG[T/A]CTGGTAGATATCATTCTTATTGTCCTTTTTTGGTTTGCCGTGTGTCCCTCTCCCTTGTTTTTTTTTTCTTCTTGAGTTTCATTCTAGACACTCTTTCCAAAAAATGAGGAAACGGGTTTGTATTACCAGGACTTTTCACATCCTCCCCTCTTTTATCCCCCTCTTGGACTTCCCTACCATCTTTTTTTTTTTTTTTTTTTTTACAGTTTTTGTTGTTTATTTTATTTTATTTTTTTATCAAGCAGGCTTTTACGTCCTCACGTTAATGTTTCGTAGAGATTCCCATCATCACCGGGACGTTCACCGGAACTAGTAAAGTGTTTTTCTCCTCACACCAAGCATCCACATTTTTTGCGAGGACTGTCTGCAATAACTGACAGAGGATTTCCATGAATATCCACAAGGCTATTTTCAACCTTGCAGAGCCTCCCAAAAAAGAAGAAGAAGAAGAAGGGAAAAAAACATTACAGTAAACTAAAAAATCTGGGAACTCTGGCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7476
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Missense 709 1407 9 22
ENSDART00000090934 Missense 708 1404 9 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Missense 708 1687 9 23
Genomic Location (Zv9):
Chromosome 20 (position 5761567)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5685176
GRCz11 20 5729444
KASP Assay ID:
554-4278.1 (used for ordering genotyping assays)
KASP Sequence:
TCTCAACAGAGGCATCAATCCTAAGCTATGATGGCAGCATGTACATGAAG[G/A]TGGTGATGCCGACGATCATACATACAGAAGCAGAGGACGTGTCTCTGAGG
Long Flanking Sequence:
GCCAATCACAGTCAGACGCATTCACATCCGCGCGGTTTATGAGAATAAAAGCCTTTGAACATTTTTCCAGACACATTTAGGTGCTAGAAATTAGGCAGATAACGTTTATATGTTCATCTTAATGCCAACTGTGTAAATAATTATCGATAAGATGCTTATGATAAGCCGTTGTTTGTTTACCTTAAGGCCGTGAAACAGCCCGTGAGCGCCTGCACACACACATATCATGCAAGTCCTATATGACTCTGTTCACGCGCCGTCCCCACAAATCAAGTTTGGCTTTAAATGCAGCTACTTTATCTGCCAACTTAAAAATAATTCATTCTTGTGCGGCCCGGTTCTGATTGATCCACGGACCGGTACCGGTCCGCGGCCCGGGGGTTGGGGACCACTGCTTTAAGGGACATAGGGAAACACATTTTTTTTTATAATTATATGTACTTTTTTTTTTCTCAACAGAGGCATCAATCCTAAGCTATGATGGCAGCATGTACATGAAG[G/A]TGGTGATGCCGACGATCATACATACAGAAGCAGAGGACGTGTCTCTGAGGTTCATGTCCCAACGTGCTTTTGGCTTGTTGATGGCTGCCACGTCACGTGAGTCTGCAGACACACTACGACTAGAGCTGGACAGCGGCCGTGTCAAACTAATCGTCAATTTAGGTATTGTATACCGTCCTTTTTTTTGGCATCCTCATCTCTCTTCTTCAGTCGTCCGTTGTTTATTATGTTACTGAATGTTATCATCTCTCTAACACTACAACTAAATTGTTATTGTTTTGTTGAGCTGCATGGTTTTCATTTTCTCGCTTCATGGACAGACGAGCTCTCTCATCACAGTCTCACTTAACCTCTGACCTCATGATCGAAGCGGCACATTTGCAGTGTTCATTCTCGAACACAATCCCATTGGCTTACTCACACATGAGGAATTTTTTGAATTATATTAATAGAAGCTGTGCTTATAATAGGGTTGGGTGATATATTGAGTGCGTGTAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15937
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Essential Splice Site 802 1407 10 22
ENSDART00000090934 Essential Splice Site 801 1404 10 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Essential Splice Site 801 1687 10 23
Genomic Location (Zv9):
Chromosome 20 (position 5770590)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5694199
GRCz11 20 5738467
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCGGCGTGGTAAAAACATCAAACTTATGGTGGATGATGATGTAGCTGAAG[G/A]TATGCATGCMGCATAGTCTTTACAAAACAAATCAGTAYCWGCCCTTATAA
Long Flanking Sequence:
GTTATACAATAACTTGCCTAACTACTCTAACCTGCCTATAGTTAACCTAATTAACCTAGTTAAGCCTTTAAATGTCACTTTTAGCTGTATAGAAGTGTCTATACACCAGAAGTGTTCTGCAATACATTAAAAACACAGGTACATAGGTACATTGTATTTAGTTTTTGCAATACATAGTACTACATAGTAGTTAAGGGCACTTAATATAAAGTGGGACCATATTTTTTTTCTCAGACATTTATCTTTTGAATTTTTTCTTTACCTGTATTTTTAAACATGGTTATTATTTTTTTATGGTCATCATTTTTTTTAATGCTGAAAAGCAAGATATTTGATTTAACCTATAGTACACTAACTTACAGTATGAACATCATTCTCAGGTAAAGGACCAGAGACATTGTATGCTGGCCAGAAAGTCAATGACAATGACTGGCACTCTGTCAGAGTTACGCGGCGTGGTAAAAACATCAAACTTATGGTGGATGATGATGTAGCTGAAG[G/A]TATGCATGCAGCATAGTCTTTACAAAACAAATCAGTATCTGCCCTTATAATAGATGAATCCAGAACTTATCACTTTACCAAGTCTTTTCATTCACAGGTCAGATGAATGGTGATCACACTCGGCTAGAGTTTAGCAATGTTGAGACTGGAATCCTGACGGAACGGCGATTTGCCTCCACGGCTCCGTCTAACTTCATTGGTCACCTGCAAGGCCTGAAGTTTAATGGCCTCCTCTACATCGACATGTGCAAGAACGGAGACATCGAATTTTGCGAGCTCAATGCTCGTTTTGGGATGCGCTCCATCGTGGCTGACCCTGTTACCTTCAAGACTAAAGGAAGCTATCTGGGACTTGCTACACTCCAGGCGTATAGCACAATGCACCTCTTCTTTCAGTTTAAAACCACCTCTGGTGATGGATTCATTCTCTTTAACAGTGGAGATGGGAATGATTTTATTGCCGTGGAGCTTGTCAAAGGGTGAGTGGACGTTGAGAATTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11015
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 880 1407 11 22
ENSDART00000090934 Nonsense 879 1404 11 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 879 1687 11 23
ENSDART00000090646 Nonsense 880 1407 11 22
ENSDART00000090934 Nonsense 879 1404 11 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 879 1687 11 23
Genomic Location (Zv9):
Chromosome 20 (position 5770918)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5694527
GRCz11 20 5738795
KASP Assay ID:
2261-3937.1 (used for ordering genotyping assays)
KASP Sequence:
TCAATGCTCGTTTTGGGATGCGCTCCATCGTGGCTGACCCTGTTACMTTC[A/T]AGACTAAAGGAAGCTATCTGGGACTTGCTACACTCCAGGCGTATAGCACA
Long Flanking Sequence:
TATTTGATTTAACCTATAGTACACTAACTTACAGTATGAACATCATTCTCAGGTAAAGGACCAGAGACATTGTATGCTGGCCAGAAAGTCAATGACAATGACTGGCACTCTGTCAGAGTTACGCGGCGTGGTAAAAACATCAAACTTATGGTGGATGATGATGTAGCTGAAGGTATGCATGCAGCATAGTCTTTACAAAACAAATCAGTATCTGCCCTTATAATAGATGAATCCAGAACTTATCACTTTACCAAGTCTTTTCATTCACAGGTCAGATGAATGGTGATCACACTCGGCTAGAGTTTAGCAATGTTGAGACTGGAATCCTGACGGAACGGCGATTTGCCTCCACGGCTCCGTCTAACTTCATTGGTCACCTGCAAGGCCTGAAGTTTAATGGCCTCCTCTACATCGACATGTGCAAGAACGGAGACATCGAATTTTGCGAGCTCAATGCTCGTTTTGGGATGCGCTCCATCGTGGCTGACCCTGTTACCTTC[A/T]AGACTAAAGGAAGCTATCTGGGACTTGCTACACTCCAGGCGTATAGCACAATGCACCTCTTCTTTCAGTTTAAAACCACCTCTGGTGATGGATTCATTCTCTTTAACAGTGGAGATGGGAATGATTTTATTGCCGTGGAGCTTGTCAAAGGGTGAGTGGACGTTGAGAATTCAAAGCAAAGTTTGCTAGATAAATAATAAGAGTTTTGTTTTCAAAAAAATGTCTAATAAGGGTCCAAACATAGTCGTCTTGGCTAAAACAAGGCTAAATTTGAGCTGTCAGTGAAAATCTAATAGACGTCTAAGAATAAGCCAAAACCAGACTAGTCTTCAATAGGATTTGCCAGGATTACCAAACTTCTAGACCTTCAGGTACTGTATAGAGAATCTGATTTACTCCAAAAAATAAAAATAAATAAATAAATATCTTCCCCACAATGGTATTTTCTGGTATTCTAAACGGTTTATTCAATGAGTATGAAGGCAAATAGTCATTGCACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19226
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 880 1407 11 22
ENSDART00000090934 Nonsense 879 1404 11 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 879 1687 11 23
ENSDART00000090646 Nonsense 880 1407 11 22
ENSDART00000090934 Nonsense 879 1404 11 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 Nonsense 879 1687 11 23
Genomic Location (Zv9):
Chromosome 20 (position 5770918)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5694527
GRCz11 20 5738795
KASP Assay ID:
2261-3937.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAATGCTCGTTTTGGGATGCGCTCCATCGTGGCTGACCCTGTTACCTTC[A/T]AGACTAAAGGAAGCTATCTGGGACTTGCTACACTCCAGGCGTATAGCACA
Long Flanking Sequence:
TATTTGATTTAACCTATAGTACACTAACTTACAGTATGAACATCATTCTCAGGTAAAGGACCAGAGACATTGTATGCTGGCCAGAAAGTCAATGACAATGACTGGCACTCTGTCAGAGTTACGCGGCGTGGTAAAAACATCAAACTTATGGTGGATGATGATGTAGCTGAAGGTATGCATGCAGCATAGTCTTTACAAAACAAATCAGTATCTGCCCTTATAATAGATGAATCCAGAACTTATCACTTTACCAAGTCTTTTCATTCACAGGTCAGATGAATGGTGATCACACTCGGCTAGAGTTTAGCAATGTTGAGACTGGAATCCTGACGGAACGGCGATTTGCCTCCACGGCTCCGTCTAACTTCATTGGTCACCTGCAAGGCCTGAAGTTTAATGGCCTCCTCTACATCGACATGTGCAAGAACGGAGACATCGAATTTTGCGAGCTCAATGCTCGTTTTGGGATGCGCTCCATCGTGGCTGACCCTGTTACCTTC[A/T]AGACTAAAGGAAGCTATCTGGGACTTGCTACACTCCAGGCGTATAGCACAATGCACCTCTTCTTTCAGTTTAAAACCACCTCTGGTGATGGATTCATTCTCTTTAACAGTGGAGATGGGAATGATTTTATTGCCGTGGAGCTTGTCAAAGGGTGAGTGGACGTTGAGAATTCAAAGCAAAGTTTGCTAGATAAATAATAAGAGTTTTGTTTTCAAAAAAATGTCTAATAAGGGTCCAAACATAGTCGTCTTGGCTAAAACAAGGCTAAATTTGAGCTGTCAGTGAAAATCTAATAGACGTCTAAGAATAAGCCAAAACCAGACTAGTCTTCAATAGGATTTGCCAGGATTACCAAACTTCTAGACCTTCAGGTACTGTATAGAGAATCTGATTTACTCCAAAAAATAAAAATAAATAAATAAATATCTTCCCCACAATGGTATTTTCTGGTATTCTAAACGGTTTATTCAATGAGTATGAAGGCAAATAGTCATTGCACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16685
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 None None 1407 None 22
ENSDART00000090934 None None 1404 None 21
ENSDART00000091877 Nonsense 26 675 1 10
ENSDART00000127050 None None 1687 None 23
Genomic Location (Zv9):
Chromosome 20 (position 5854574)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5778183
GRCz11 20 5822451
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACCCCCAGTGGCTTTCCWGCATGCTACCCCTGGTCAYAGGGTGCGTGTTC[G/T]GAGCCGTRTGGGGCTCGAACCTTGATAGCACAGTCGTCCTCTCGTCCTCC
Long Flanking Sequence:
GAGAAGACGGGCAGCAACAATCGGAGAGTGTGGCTGCGAGACAGATGCTTCAAAGCAGTGGCGCAGGTTGCCGGTTGCCACCCGTTAACTCCCTACCTTGCTCTTTCTCCTCCAGAGGTGAGCTGGGTCAACCGGGGATACGTGGTGTTCTAATTCTGCCTCTCAGAGGAGCAGTGGATAAATAGCATCTGCTGGAACTGAGGAATAACTATATTTACACACACACACAAAGATTCTTTCAGGAGCCCCATTTCTTTGGCAGTGGGGAAAGTATTGTGCTAAGAATTTGTTTGGATTTTTCATCCAAGCGAGGGCTTGCATTCCCTACCATGGGATCTTAACGGACGTCAGGTTCTGCTCACCTGTTTCTCTCAATACACCTGCTAAAAGCTGTCTACTCTTGCAGCAAGGAGGGGACGATAGCTATGCGCCCCCACTTTAAGACCCGATACCCCCAGTGGCTTTCCTGCATGCTACCCCTGGTCACAGGGTGCGTGTTC[G/T]GAGCCGTATGGGGCTCGAACCTTGATAGCACAGTCGTCCTCTCGTCCTCCACATTCTCACATTCTGAAACACAGCACCACCATCACCTGGCAGGAGCCCAGCATCACCCACCATCCATTGCCATCTACCGCTCCCCTGCCTCTTTACGAGGTGGCCACGGTGAGTTTCTTCCATCACCCTCCTTCCTACAGGGGGGGCAGTTGATTGAGCTGGATCCTGAGAAAAGTGTTGCTATTGGAAATGTCTTTGAAAGTTACAATTTCAAGAGTGCATAATTCAATTTGCTGGTTGATCAGTTTACTTCATAGATCACTTCAAAGTTTGAATGGTTTCATGTGGAGGAATTCCAATGTGTTCAGGTGGTTGTCAATTTGTACAGTAATTAAGGAGCTTAGCTCAATTTAACGAGTTCAGAGAGGGTTTTTTTCCCCAGTACCACTGACAATACTACAGCAGATGGGGGTGACAGGAGGAGAGAGCGTGTGCATCACTAATCTAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44933
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 1233 1407 17 22
ENSDART00000090934 Nonsense 1232 1404 17 21
ENSDART00000091877 Nonsense 220 675 4 10
ENSDART00000127050 Nonsense 1232 1687 17 23
Genomic Location (Zv9):
Chromosome 20 (position 5963567)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5887176
GRCz11 20 5931444
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTTTCAAATGGCTAATAAGAAAATCCCGTTCAAATATACCCGGCCGGTC[G/T]AAGATTGGCTACATGAGAAAGGTAACCCTCACAAGACCCTCAGTGTTTTT
Long Flanking Sequence:
TTGACTGCATTTGCAAAGTTTCTTATAGTCAGTTAAACGTCTGTTGAAGGAGCAGTATCAACAGATATTAATCAGACAGTCTACTAATACTCAAATGGACCATCAGAATAAAGTGTTACCGACAAGAGTTACTCCCTATTTAAGAGATGTTTTGTAGCTTGGTAGGTATATGTTTGAAGTTAGCTAGTCGTATCTCTAACTTACTTACTTTTTTATGTTGTCACAAAGTCTGAATATGTGTTATATGTGTTAAACTGATAGTTGAGTTGGTTACTCTTTGATTAAAATGCTTTATAATATCACACCAGAAGTTAACCTTAATGAAACCTAAACTGCCTATGATAACAAGACCTAAATCCTTTAAACACATCTAAACCTTCTTAAACAGTGTATAAATGTACAATGTGCTAAGATGTCTTTCGAACTTTAAAGGCAACAGCGACATTGAGCGTTTTCAAATGGCTAATAAGAAAATCCCGTTCAAATATACCCGGCCGGTC[G/T]AAGATTGGCTACATGAGAAAGGTAACCCTCACAAGACCCTCAGTGTTTTTGTTTTGTTTTTTTTTTCGTTTTAAATTGCGTTCATTTGCTCCTTGTCATGCTGTTTCAATATATTTATTTATTTCAGTTACATCTGAACAGTCTTGCCTTGGCGTTTTGACACTAATTAACCTAAAATGTTCATAATTTACTTCCCTTCCCATTATGTAATATTTGCGTTTAATATTTTATTTATCTTTTTTTTTATGTGGATTGTGATCCTTTTTTTGTTATATCCATCAAATCATTGACCAGTTAAAGGGACTGGTAAACAATAATAAAACTGCATAACTGCTACGCAACTCTAACTTTGAAGCTAAACCAAAACTCGACACAAGTTAGGGTGTTTAATTTATTACATTTTAAATTATCTTCCAAAGTAAAAAAAAAAAATTCAACACCTAATTTAACATGTATTTAAAGACAACAAATTGGCATTTAGTAACAAAGGTTCTCTGCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32273
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Nonsense 1289 1407 18 22
ENSDART00000090934 Nonsense 1288 1404 18 21
ENSDART00000091877 Nonsense 276 675 5 10
ENSDART00000127050 Nonsense 1288 1687 18 23
Genomic Location (Zv9):
Chromosome 20 (position 5964807)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5888416
GRCz11 20 5932684
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAATGGCCTGAAGGTTCTCAACATGGCTGCCGAAGGTCATGCTAACATC[A/T]AAATAAATGGCAGCGTGAGACTGGTTGGGGATGTACCTACCAGCAGAAGC
Long Flanking Sequence:
CTTTGAAATCCCATTAGTGCTTCTACATGCATGAATCAACATGATAGTCCTTTGAAATGTATGAGATGAGCTTTCTTCCTTGCCCGGTGTAATATTAAACTGTAAATATGTCGGAGCTGTAATCAGAATGCATTTCTTTTTCTGACAATATGAAAACTTCAAAACATCTGCATGAGAAGCACGTCACAGTGAAGTCAGCACTACTTTATGTATTTATTAAAGCTATGCTTGTACTTTAAGAATACAGTAATGATAGTAATAAACAGTAATCATAAATTGATCGATTAGCCAACGATAAATAAAAAGCACATAAACTGCTTTGACTGTATTCCCCTTCACTTGTCTTCCCCTCAGGTCGTCAGCTGACAATTTTTAACACCCAAGCCACCATCTCAATAGGCGGTAATGACCGCAAGAGGCCATACCAAGGCCAGCTGTCTGGTCTCTATTATAATGGCCTGAAGGTTCTCAACATGGCTGCCGAAGGTCATGCTAACATC[A/T]AAATAAATGGCAGCGTGAGACTGGTTGGGGATGTACCTACCAGCAGAAGCCCTTCACGCACAACCACATCCATGCCCCCGGAGATGTCTACCACCTTCATTGAGACCACCACCACTTTGTCAACCACCACTACTCGCAAACAGCGATCACCACCCACAATTCAGGTAGGATCCTTTATCCCGTCATAGCTTGAATTCACAGATCTTGCGATAATACTATATAGTAACATGTTTAACTGTGTAAAGACATGTTTATTATGCATATATGAATGTATCTATTTTGTTTGATGTGTGTATGAAGTAGCCTTCTTGATGGTTGGTGCTACCACTTGTTACTCAAAATTTCAGGCTCATTGGGAATATGTGCCATGGGCTACATTTTTGAGAACCGAGAAATACATGCCCAGGGGTACATAATGGCTACATTTTGTGTGTAAAACAAATGCTACGGAGCGGTACCGCTGACCACTTGCGTACATATGGGCTCCTTTTCTGCTTTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36961
Status:
Mutation detected in F1 DNA
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Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site, Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090646 Essential Splice Site 1372 1407 None 22
ENSDART00000090934 Splice Site 1368 1404 21 21
ENSDART00000091877 None None 675 None 10
ENSDART00000127050 None None 1687 None 23
Genomic Location (Zv9):
Chromosome 20 (position 5989645)
Other Location(s):
Assembly Chromosome Position
GRCz10 20 5913254
GRCz11 20 5957522
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGATGGGGATGTATATGCTCACTTTTGTATATCCCCATCCCTTCCTTAC[A/C]GCCCAAAGCTCTTTTGCCACCCGAACGCTTCGTACCGCCCTTACATGGAC
Long Flanking Sequence:
TATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATCTATTTATATATATATATATATATATATATATATATATATATATATATATATATAATAAGATGGATAAGTTTAAATACCAACATAATGGATTTGTTTAATGATTTCTAAATTGATTCATGAAGAGATTTTTCTTGTCTTGATTAACAAAATCAGCAATATAAATTACTCTAAACATTCAAAGTTAATATAATACACAATTCCCATTTAAATCTGACTTGAAAATTGTTGAAATTAAAAGACTATCAAAACTGCATGGCTCAGAAGTTGCAGCCTAGGGTCTGTAAGAGTGTCAGTCTTGAGAGTGCTATATGATCTAGTAGATGGGGATGTATATGCTCACTTTTGTATATCCCCATCCCTTCCTTAC[A/C]GCCCAAAGCTCTTTTGCCACCCGAACGCTTCGTACCGCCCTTACATGGACATGGCAACTGATGTACACGTTCACTTCCATCTATTTCATTTCCTACCTAGTCTGTTCATAGGCCTCTCCCTCCTCTCTCTCTTTCTCTATCTCTCACTCTCTCCTCCTCTTTCTCCCCCCACCCCAATGATACACTATGTAAAGTCATTTAAGAATTCCTATTTAAAAAAAAAAGAAAATATGAAGCTGTAAATACTTTATTGCAAAGTTATCTTTAAAACAAGGAAAAGAAAAATGTACAGTTCCTTTTGTAGAGAAAAGGATTTATTATCAAATGAGCAGAATGGTGAAGTTATTTTTCATGTCATGGTGTGAATGTATGTGTCGTTGCCTCCCTGTTTCATTCTGTCTTAGAGAAAAATAACTATATATTAGACCTGAGGATAAATTAATTGCCTAACTACATCTTTAGAGATTAACCATACTTATCCCCAAGCATTCTTTCACCAC
Associated Phenotype:
Not determined