ZMP

pcdh1g2

Ensembl ID:

ENSDARG00000062608

ZFIN IDs:

ZDB-GENE-050608-2, ZDB-GENE-050608-3

Description:

protocadherin 1 gamma 2 [Source:RefSeq peptide;Acc:NP_001018872]

Human Orthologues:

PCDHB1, PCDHG@, PCDHGA1, PCDHGA10, PCDHGA11, PCDHGA12, PCDHGA3, PCDHGA5, PCDHGA6, PCDHGA7, PCDHGA8

Human Descriptions:

protocadherin beta 1 [Source:HGNC Symbol;Acc:8680]
protocadherin gamma cluster [Source:HGNC Symbol;Acc:8695]
protocadherin gamma subfamily A, 1 [Source:HGNC Symbol;Acc:8696]
protocadherin gamma subfamily A, 10 [Source:HGNC Symbol;Acc:8697]
protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:8698]
protocadherin gamma subfamily A, 12 [Source:HGNC Symbol;Acc:8699]
protocadherin gamma subfamily A, 3 [Source:HGNC Symbol;Acc:8701]
protocadherin gamma subfamily A, 5 [Source:HGNC Symbol;Acc:8703]
protocadherin gamma subfamily A, 6 [Source:HGNC Symbol;Acc:8704]
protocadherin gamma subfamily A, 7 [Source:HGNC Symbol;Acc:8705]
protocadherin gamma subfamily A, 8 [Source:HGNC Symbol;Acc:8706]

Mouse Orthologue:

Pcdhb1

Mouse Description:

protocadherin beta 1 Gene [Source:MGI Symbol;Acc:MGI:2136730]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa34892	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa34892

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000090733	Nonsense	4	811	1	2

Genomic Location (Zv9):

Chromosome 10 (position 21737964)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	21699378
GRCz11	10	21656759

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAAGAACCTTTTGGGGTAGTTGGAATATTAAATCATCCAAAATGAACCGG[A/T]GATTATACCCAATCTCTTTCTTTGCGTTTTTCGTGGCTCTCCTTCTATTT

Long Flanking Sequence:

TCATTTATTTAAAATTGTTTTGCTTGGTTATTTAATAGTTATGAAGTTACTTAACTGCCTTTGTTTGTGTTTGTGAGGTCTTCTAGTTTCAGCACCACAAGCCTGGACAGCGCCAGTGATGTATTTTGTACTTAATCATTGTATGCGTAAACATTTCAAAGTGATTATAAAAATATTGCCTATAAACGTATGAAAATGGTTATAGGTATTTATACAGTGTCAAACTCAAATAAAAATTGATCCATATATGTTGTCTTGACAATAAAAGAATAATGCAATGAACAGAAAAATACTCAGAGTGTCGCTATTCACTAAGACTGTAGATTAACGGTTCTCTCCTCCCACACCTAAGGTGGAATAGAAGCTCTGTGTGACAGAATAAACGCTACATAAAATGGAGTAATCGTCCGTCGACACATGTTAACTTACTGGAATAGGTTTTCATTCATTTAAGAACCTTTTGGGGTAGTTGGAATATTAAATCATCCAAAATGAACCGG[A/T]GATTATACCCAATCTCTTTCTTTGCGTTTTTCGTGGCTCTCCTTCTATTTATTCTGAAAATCGCGTCTGCAGATCTGAGCTACAATATTCCCGAAGAAACGAAGCGTCACTACGTGATTGCAAACATAGCCAAGGATTTCAAGATGGATGTTAAACAATTGTCTGCACGTAAAGCTCGAATAGACCCGGAGGACAGCAGTAAACGGTACTGTGATATTAATCCAAATACTGGTGATTTATTTGTGGCAGAGACCATAGACCGAGAAGAGCTTTGTGGATCTAGAATGTCCTGCATTCTTAATTACGAGCTTGTCCTGGAAAACCCTCTTGATGTGCACCGTATAATATTTCAAATTCAGGATATAAATGACAACACACCTCGATTTCCAAATGAGCGCATTAACTTTGAAATAAGAGAATCAGCAGTAAAAGGCCAGCGATTCCGTTTGGATGAGGCACATGATTCAGACATCGGGAAAAACTCTATCAATGACTATTCT

Associated Phenotype:

Not determined