ZMP
vcam1
Ensembl ID:
ZFIN ID:
Description:
vascular cell adhesion protein 1 [Source:RefSeq peptide;Acc:NP_001077304]
Human Orthologue:
VCAM1
Human Description:
vascular cell adhesion molecule 1 [Source:HGNC Symbol;Acc:12663]
Mouse Orthologue:
Vcam1
Mouse Description:
vascular cell adhesion molecule 1 Gene [Source:MGI Symbol;Acc:MGI:98926]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa31070 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa10702 | Nonsense | Available for shipment | Available now |
sa24124 | Essential Splice Site | Available for shipment | Available now |
sa9939 | Essential Splice Site | Available for shipment | Available now |
sa45764 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa31070
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090390 | Nonsense | 11 | 808 | 1 | 10 |
Genomic Location (Zv9):
Chromosome 22 (position 16394983)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 16153605 |
GRCz11 | 22 | 16179875 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTCATAAGTGTACAACATGGATACAGCTTTCTTGCTGACTTTGCTTT[T/A]GCCAGTTGCAGGTAAGTTTCATCTGTTAGTAATTTAACTGCATATGCTAT
Long Flanking Sequence:
CAAATGTTTTTTTTTTCTATATAGGCCTCATGTTATACACTTAAATTAATTCATATTTATACAATAGCCCCCTCCTCAATCCATCAAGCTACTTTCTTTTAGATCAAGCATTTCAGGGAAAACAAAATAATTTCCCCAAGCTTGTAAAAAAAAGCGTTGGAAGTTGTTTTAATGTGTCGCCACTCGCTAATTCATAAAGGAAATGTTATCTTCAGAGTGTACACAGTGATTTCCTGGAAACCCTGTCAGGACAGCAGAGGGAGCCTGTGGTGGATGGAGAACTTCTGCTCGCCTCTCTTCTTGGTCCAAACAAAGGATTGAGGGATGGGGAATTCCTTCATGGCTTATTTAGGGCTACTATCCCACCCCCTTCTCATATAAATGAGATCCAGAGCTGAATGAAAGCAAGATCACTAACTCATTTTCACTCCCTTGGAGCACTTGGAAAAATTCTTCATAAGTGTACAACATGGATACAGCTTTCTTGCTGACTTTGCTTT[T/A]GCCAGTTGCAGGTAAGTTTCATCTGTTAGTAATTTAACTGCATATGCTATTAGGCAACATGCATATCTTTACATATTTTACAGTCTTGCTTAACATTTCTTTTGGTCAGTTTCTTAGACTTTATATGGCTGATTTTATTAATGCAGTTATATTATTATTGGTATTGTTGTTGTTGTTATTATTATTATTTAAATGTTTACTTTTTTATTATGAAAAAAATTTGCTTTGTTGTATAATTTTTTAATATTTAACCTCTTGCTTGTATTTTCCACATGGAGAAAAATATTCTTAATATAATTATTAATATTGATTATGATTAGAAGTTATGATAACTGATTACATACAAATAATTGTATTTATTTATTTAATTTTTGCATAAATTGACATTATCGAAAATAACAGAAAATAATATTTAGAAAAAAAAGATTTTAATCCTTAGCCAACACATTACCTGTTTTAATTACAGATGAGTTGTTACATCAATATTCAGAATAGCCCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10702
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090390 | Nonsense | 116 | 808 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 22 (position 16393074)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 16151696 |
GRCz11 | 22 | 16177966 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTTGGAATCCATTTCAGCTTTTCCAAGAAACCCAGTTATATCCGGAYA[T/A]GATCACTTGATAATGGGCAAGGAAAACRTTTTGTCCTGTGAAGTGTCTTC
Long Flanking Sequence:
TTCTGTGTTTTCAGTTTAATCATTTGAGTCCGGATTTAGAATACACTTTTCTGTTGTGACTTTTTACCACAGTAAATATTTCTCAAACTATGTCTGGCATGACATTGGAGGTCAGACTGAGTATAGTGTTGGTTAACAAAAATGTATACAACTATATTTGATGGATTTAAAGGTTTTTTTTTTAAGTGAACGGTAAATATTGATTTGATGAACAGAACATTTGTCCAATTAAACTTTTAGTTCAAAAATTAATATTCACTATGATACCAAGCTGTCAACATTCAAGTGGATCAGTGAAAAAAATGCTAAGACAAAAATGTATTTTGTTATTAAAACAATTATTTTAGGAACTGTTTATGAAAAGTTTTGATCCACTCCAAATGTTGACGACTGTATCCCTGCTCAATGAAATACTTTGACTCTTCATTTGTGCTTTTGACTAATTTTTACATTTTGGAATCCATTTCAGCTTTTCCAAGAAACCCAGTTATATCCGGATA[T/A]GATCACTTGATAATGGGCAAGGAAAACATTTTGTCCTGTGAAGTGTCTTCTGTGTACCCGTCGGAGTACTTTGATGTGGAGTGGTTATATGAAAACAGGGTTGTTCATAGGGAGAGTGGAGACTTTGATAAAGATGCTGTTTCCATTCCTTACACATTTACACCTTCAAGTGAGGACGATGGAAAGGCAATAACTTGCAGAGCATCCCTCAATATTGAAGGTGTACCACCCGAAGAGAAGACCAAGGAGACGTCTAGACACATCAAAGTACTTTGTAAGCTAGACGTACATATTTAAACATAAACCACCTTTCAATTAAACCCAAAACGGATGTGGGAATAGTGTTTCCTCTCTGAAGATGGTGACCCCCATGGTTATTTATTTTTCCCATTGCTTTCACAGCTGCACCGCATAACGTTGAAGTATCTGGAGAGACCGCAGTCTCACTGGGATCCAGTTTAACTTTGACCTGTGAGGCTGAAGGCAATCCAAAGCCTGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24124
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090390 | Essential Splice Site | 383 | 808 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 22 (position 16392064)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 16150686 |
GRCz11 | 22 | 16176956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCAATGAGTATGGCAGTCAGAGGACCACTCTTAATCTAAATGTTGAGG[G/A]TAAGACATTGGTGGATTTTGTGGTACTAAATTTGGTCTGTTGAGCACAGT
Long Flanking Sequence:
ACGGCTCTTAAACCAGATGGCCATTCTGTGGAACTGGGAAAACAGCGAGATCTCTTCATGCATAATGTGTCCTTATCAGATGCTGGAACTTACCAGTGTAATGTTAGCAATGACTTGGGAAACCAGATGGTCAACGTTTCAGTGGTCGTTCAAGGTTAGAGGTGCACTTAATTCCCTAAATGTGTCTTAAATGTCATTGATCCTATATATTGTAATTTCTAATTTCTTTACAGCACCTCCTGTGGATACTCGCATTGTAGCAAGTCCACAGTCAAGTCTGAACGAAGGAGATTCTGTGACCATTTTCTGCAAGTCCAGTGGGGTTCCTGTGACACGTGTGGTCCTTAGTAATGTTGCAAAAACTATACTAAAAACCAAAGAAGGAGCTGAGACATCAGTTACCATTGACTCCGTCAAGCTATCCGACACGGGCATGTTTGTTTGCGAGGCTTTCAATGAGTATGGCAGTCAGAGGACCACTCTTAATCTAAATGTTGAGG[G/A]TAAGACATTGGTGGATTTTGTGGTACTAAATTTGGTCTGTTGAGCACAGTTAGACTGTAGTAATGGGTAAAATAAAATAAACTAATTGTAGGCCTATATCAATTCATTAATTCTTAAAGAGTAGGTCTTCAAAAATATCTTATTTGCAGCTTGTAACGTAGCTGCCCTTCAATGTAAACAGTCTGCAAAGTTGTTAATCAAAAGAATTCATGATAAACAAAGATGCTGTCTCTCAAAAAAAAAAAGAGTCAGCTCTGAGTCATCTAAATGAGCTGTTATTTATGTATGTATAATTTATTTATGTTATATATTATTATTATTATTCTTTTTTTTTATTTTTTGCCTGCTACCAGTCTATGTCAAGAGAATTTATTTAATATATTTACGTAATCCCTGCCTGCTTGTAAAATATTAACTTTCTGAACTGGGACCTGAATAGATAGGGAGAGACCAATCAAAATAGATTTGGCCAGCTGACCAATCAGAGAAGAGTTGGCTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9939
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090390 | Essential Splice Site | 384 | 808 | 6 | 10 |
Genomic Location (Zv9):
Chromosome 22 (position 16391351)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 16149973 |
GRCz11 | 22 | 16176243 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTYGGAGGTGACACGGTACARCTCTTAACTTTCTTTTAATTGTCTTGCA[G/A]CTCATTTGCTGGAMGTGGAGCTRCAACCAAATGGCACGGTGGTGTCCGAC
Long Flanking Sequence:
ATAAACAAAGATGCTGTCTCTCAAAAAAAAAAAGAGTCAGCTCTGAGTCATCTAAATGAGCTGTTATTTATGTATGTATAATTTATTTATGTTATATATTATTATTATTATTCTTTTTTTTTATTTTTTGCCTGCTACCAGTCTATGTCAAGAGAATTTATTTAATATATTTACGTAATCCCTGCCTGCTTGTAAAATATTAACTTTCTGAACTGGGACCTGAATAGATAGGGAGAGACCAATCAAAATAGATTTGGCCAGCTGACCAATCAGAGAAGAGTTGGCTTACAAACCTTAAGCACAGAAAGAATTTAATCAAATGTAATATTATATGCAGATTCTGAATTACAATTTTTAATGATCTTAGACCCATTTGAACCTATAGAGGACTCGAACACTTTAATAGGGCACTAAAAAGCTCCTCAGAAAGTGAGAACGTTGTGATTATGTTTTTGGAGGTGACACGGTACAGCTCTTAACTTTCTTTTAATTGTCTTGCA[G/A]CTCATTTGCTGGAAGTGGAGCTACAACCAAATGGCACGGTGGTGTCCGACAGAGGCTCCAGTTTGGTGCTGTCTTGTCAGGCTTCAGGTTGCCCTCATCCCGAGTTCTCCTGGAAGAATCTTTCAAACATGTCAGTCCACAGGCAACCTAAAACTGATGGCTCTCTGTCCCAGCTGCTCTTTGATCCGGTGGAGGTGGAGGATGAGGGAACTTACGTCTGTGAGGTCACATGTGGCTCAATCAAGAAGTCCAAGCAGACGGAAGTGAAGGTGTTTTGTAAGTACCTCTACAAGTGTACTATTCAGTCTTAAGCTAAGAAGATCCTCAAGGGATATATTAAATAGTTCACTTGCTGAATGGTGAAGGTATAATGAAGTTTTCAAGGTCTCAACCATTCTAAATTTTGAATGAAATTTGCAATTTCCAGACTCAGGGGTGTCAGACGGGGGGTAAAAGAGTATGCCAACCTGAGTTCACCAAGTAGGACATGTTCCTAGATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45764
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090390 | Nonsense | 514 | 808 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 22 (position 16389478)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 16148100 |
GRCz11 | 22 | 16174370 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTGCACTGTTCAAGACGTATTCCCTGTCAACCTTTTCCAAATTCTGTG[G/A]CTGGATGGAGAAAGAGAAATCTGGAGAGAGGAATCTCAGTCATTTTCAAG
Long Flanking Sequence:
TAACCAACTGTTAAACGAGTCACCAGTAATTCAGTCTCTTTGTGGGAAGTTTTAATAATAGCTCACCATGACATTGATTTGATAGACTACGGATGTAAAGTAGTTCATCCTGTCAAGATGTAATGCTTCTCTGTTAAATGTTATTGCTTACAAGGTCACAGAGACTTCCCCAAAATCTTCTGTTGCTCACTGAGGATTTTAACTCTTAGAATGTGCGAGGGAGTGTTGCTTTGTTTATATTATGTGCTGTCCTGCATATTGACTCTGTCAGAATGACGATGATCTGCCCTAATTTGAGGATCTTCTTATCTCAAATGTATTTATTACTTCTGGTTTTTATTTATACTTGAAAGTGCTTAGATATTGCGTTTTCTTCTCTTATCAGCATTTGCAACATGTCCTATCGTAAAAAGTTCTGGACCTTCCCTGGCAGGAGAGAGGATGAAATTGACCTGCACTGTTCAAGACGTATTCCCTGTCAACCTTTTCCAAATTCTGTG[G/A]CTGGATGGAGAAAGAGAAATCTGGAGAGAGGAATCTCAGTCATTTTCAAGTGGATCAACAGATCTGACTTCGGTTTATTCTTTACAAGTAGACGCCGAAGACCAGGACAGACATATCACCTGCAAGGTCTTGCTGGACATGCATGGTGTGCCACCTTCACAAGTAGTGAAGACTGCATTTACTACATTGTCCATTCACTGTAAGTCAGTGTTATTTTTTAAATCCTCTTAATTTTGGCTTTGATCTGTATTTTTGTGACATTTCGCTCCTTTTACAGATCCCCCTAGAGCCACAAGGATTATTGCAAGCCCACTGACAAAGTTAAAGGAGGGAGAACCTGTGAGCTTTTCTTGCCTTTCTGACAGCTTTCCTGCAGGGCGTATGGTGCTAAGCAGGGTTGTGGATGGCATACGAACAGAGCTAAAGACCATTGATGGGGTTGAAACTTTATTTACCCTACCTTCGGTTACGCTGGATGATGCTGGCATCTACGTTTGTGA
Associated Phenotype:
Not determined