Busch Lab

ZMP

gpd2

Ensembl ID:
ENSDARG00000062430
ZFIN ID:
ZDB-GENE-030131-4869
Description:
glycerol-3-phosphate dehydrogenase, mitochondrial [Source:RefSeq peptide;Acc:NP_001038813]
Human Orthologue:
GPD2
Human Description:
glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:HGNC Symbol;Acc:4456]
Mouse Orthologue:
Gpd2
Mouse Description:
glycerol phosphate dehydrogenase 2, mitochondrial Gene [Source:MGI Symbol;Acc:MGI:99778]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa7579 Missense Mutation detected in F1 DNA Not yet available
sa45245 Nonsense Mutation detected in F1 DNA Not yet available
sa33826 Nonsense Mutation detected in F1 DNA Not yet available
sa17515 Nonsense Available for shipment Available now
sa9425 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa7579
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090266 Missense 99 536 4 13
ENSDART00000127495 Missense 99 729 3 16
ENSDART00000144028 Missense 99 726 4 17

The following transcripts of ENSDARG00000062430 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 12352540)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 12205762
GRCz11 6 12440620
KASP Assay ID:
554-4304.1 (used for ordering genotyping assays)
KASP Sequence:
TACCTGTCTTTCTGCCCCCTCGTCCAGATCTGAAGACYGCCCTAGTAGAA[C/T]GCAGTGATTTTTCATCGGGCACCAGCAGCAGGAGCACCAAGCTCATTCAC
Long Flanking Sequence:
TAAAGTGGCCGTTGAGTGTATATGTATATATTGACCGCATTGAAAGGACTATTTCTTTTCTTTTTTACATTTTTAGGTCAAAAATATACTTCTTCATTGACTTGCATTCCCTAAATCACCAAGAACCGTTTTTTTTAGCTAAAGATATTACAAAATAAAAATAAAAACATTTTCTGGTTAATAAAAAAGGTCACCTACATCCTGGATGACCCGTGGAGTAAATTACCAGAAAATGTTCCTTTTTTCAGGGTGTACTATCCTCTCAAATGTGATAATTTCAATTGGATTTCATAAAAAGGTTTTCTTCTCATTAGAATGTGCCCGGGTGCAATAAGCATGTTGTGATATTACATATAGCGGAGAAAGCCGTATGTAAATGACAGCAGCCGCAGTCTAAATATTTGGCAGCAGAAGGTCTCGAAATGCCAGTGCATTGTCTAATCCGTTCCATACCTGTCTTTCTGCCCCCTCGTCCAGATCTGAAGACCGCCCTAGTAGAA[C/T]GCAGTGATTTTTCATCGGGCACCAGCAGCAGGAGCACCAAGCTCATTCACGGAGGAGTCCGCTATCTGCAGAAAGCCATCATGAAACTAGATTATGAGCAGGTGAAGGCCCCATTTTTCCCGATTTGCCCCTAATATTTCGAAGAAGGATTACGAGGCTGCTTGCGCCATCACTGTGACATTTTGAGCAGCTAGAAGACAGACTGAGAGAAAGACAAACATTTAGTAGGATACTGCAGGTCTGAAACATCACAGCGGAGGATTAATAACCAGAATATACTGGATAGCTTGACCAACAACTTTTTCTTATTACTGAAATTTTGATACAATAAAAAAGAGGCTTTAAATGACAGTAAGAAATTTGCACTTTCAAATTTAAAACTTGAAATAACTGCATTCAACAGTAGTCGGACGATTTAATTAACAACAGGAATAAATGCATTTAAAATATGGTTTTATTATTATAAATAAGGTGGTAACACTTAATCTATAAATCACAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45245
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090266 Nonsense 245 536 7 13
ENSDART00000127495 Nonsense 248 729 6 16
ENSDART00000144028 Nonsense 245 726 7 17

The following transcripts of ENSDARG00000062430 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 12326622)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 12179844
GRCz11 6 12414702
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGCCATCGCTCTTACAGCTGCTCGACATGGTGCTGCTATTGCTAACTA[T/A]ACAGAAGTGGTTCATCTGCTAAAGAAACCAGACCCCAAGACAGGCCAGGA
Long Flanking Sequence:
TGAATTATAGATGTTTTTTACTGCATGTAAAGCAAGTATGTTATAAGTAACTGTAATCAAATTACAGAAAAATGAACAGTAATCCATTATTTTATTTTTTCAAGTAACTTAATTAAAGGAACTAGTTACTACACTCATTACACCCAACACTGCTCATAATGGTCATACATCTCCATTTAAATCATTTTTAAATAAACAATGCTGTTATTATGACAAATAGATTTTTACAATATGTTACTTTTTAAAATTGAAATCATTAAATGAATAAAAGAGTTGAAGAATGTAAAACTTTGGCTAAAATGCTGTTTAAATAAAGCAAAGCTCAAATGTAAAGACTAGAAAAATCTGTTTTATAAAGCGAGGTTAATGTGTGCCTGTTTTTTGCACATGTGTATTGTGACACACTCTGTTTCTGCATTTTCAGGGCAGCACAATGATGCCCGCATGAACCTGGCCATCGCTCTTACAGCTGCTCGACATGGTGCTGCTATTGCTAACTA[T/A]ACAGAAGTGGTTCATCTGCTAAAGAAACCAGACCCCAAGACAGGCCAGGAGAAAGTATGTGGAGCCCGATGCCGAGATGTGGTCACAGGTGAGAAATGACCAGGATGAAATTTAAATTAACTGCTTTAGTTCAATAGTAAATTACATTTCATTACATTTTAAGTTGACTTCAGAGGGGAGGAAATGTATGGAAGAGTAATGTGTAGTCATATTTTGGAAATATCCAAATATTTTTTGCCGAAAAAATATTTATTGTCAGTTGCACCGTTTGATGCACAGTTAACAACACAAAAGTCTTTTTCAAACTAAACAGCTTCCTGTTGGTCAATACAGTGAATAGATATGAATATGTAAATAAATACCTCTCAGTAACATAACAGCTAGCTCTTTGCAACTCTCACATGGTCGCTCACTGAAGCTATGCAGGGCTGCGCCTGGTCAGTACCTGGATGAGAAACCAAATGGGAAAGCTAGGTTGCTGCCGGAAGTGGAGTTAGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33826
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090266 Nonsense 345 536 9 13
ENSDART00000127495 Nonsense 348 729 8 16
ENSDART00000144028 Nonsense 345 726 9 17

The following transcripts of ENSDARG00000062430 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 12320487)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 12173709
GRCz11 6 12408567
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCTTAGACCCTGCCACCAGTGATGGCCGTGTCATTTTCTTCTTGCCCT[G/A]GGAGAAGATGACTATCGCTGGCACCACAGACACTCCTACTGAAGTCACAG
Long Flanking Sequence:
GCCAAGTGAACCATGCTTGAGCCCGATTCAGCGCACTCACACTTCTCAAACGATCCGTGAAACGGGCCTGGGCACGGTACGGATGTCATAGTGTGAGTAGGCCCATAGTTTCAAGGGCAAAGAGGAAGGGATAGAGGTACAAAAATATAATTGGTATTGGGCTTTAGTCTTATGCCTTCAAGCTAAAGAGAATTGAGACACCCCCACCCCTTAACATGAACACGCAAGGGCTAAGAGGTAGAATTGGGATTGGGCCAAAGCATTAGCCTAATCAATATGATTTTTCGACACCATGAAATAAACGATAAAGCATAATATAAGACAAGATACTTTATATTTCATCCTTATGATATATCTATCTCAATATTGCACAGCCCTATACTGTTAACGGTTATAGATTTGTATCGTACATCTGTGTCCAACCTGCAATTACAGTCCAGACAACATGGGGCTCTTAGACCCTGCCACCAGTGATGGCCGTGTCATTTTCTTCTTGCCCT[G/A]GGAGAAGATGACTATCGCTGGCACCACAGACACTCCTACTGAAGTCACAGCTCATCCCATCCCAATGGAGGATGACATCAACTTCATCCTGAGTGAAGTCCGCAACTACCTCAGCCCCGATGTAGAAGGTAACGTTATTTCACCTCTGCTTTTCCTTTTGAATGCTTCTCAAAATGTCACATTCTGCACTTATGTCAACAGGAAGTATAAATAACTTTAAAGCAAAATACAAAACTGTTGTTTTGTCTCAAATTTCAGATTTTTGGCTTTTTTGGCTCTTCATGATGTGTTGCTTCAGTCTATTGGAAAGGCAACATCCGAATACAACTTAAAAGAGATAGTGAAAATGTATTATATATTCGTGTGGTTTCAAACCTTTTTTGTTTGATTATTATTTTTTTGTTTTAATAAATTATTTTGTTAGAAACCTATAACCATTGACTTGTATAGTGGGAAAAACAAATACTATAGAAGTCACCAAAATTGGACAAATCTGCAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17515
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090266 Nonsense 439 536 11 13
ENSDART00000127495 Nonsense 442 729 10 16
ENSDART00000144028 Nonsense 439 726 11 17

The following transcripts of ENSDARG00000062430 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 12308267)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 12161489
GRCz11 6 12396347
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCAAGGTTTCATAGCACTCTGTTYACTGTAGGTGGGAAGTGGACMACCTA[T/G]CGTTCGATGGCTGAGGAGACACTTGATGCGGCCATAAARGCTCATARCCT
Long Flanking Sequence:
GTTTACTGACCACAGCTTTGGATTGCTCGTATACATCTGTTTGCTCCTGTGTTGACTGTTGCTTGCCTTACCATTATCTGCATAATAAACCCTGCATTTGGATCCGCACCTCCACTGTCAGTGTCCCACTTCACATCACAGAAATAACTAATTACCTCAGACAACCGCAGAGCATCCAGAGCACCCAAAAACCATAACACTTTTGAATTATTTTAATTTAAAAAATGTATCAGAGCTACAGCTAGGGTTTGTCTGTGGTGGCTTCTCTGAGAGTATAGCTTATGGTTGCTTAGCACACGAGAGGCATGATTATATTGGCATTTTTCATATGGTTTTAAATGTTATGTGTAACTCTTTCTTCAGCTGTATAAAATAATAATAAAAAAATACACTAGATTAATTTGTAATAAGTCTTTACAACTGAGTAATAAGTGTTCAGCTGAGGTTGTATCAAGGTTTCATAGCACTCTGTTTACTGTAGGTGGGAAGTGGACAACCTA[T/G]CGTTCGATGGCTGAGGAGACACTTGATGCGGCCATAAAGGCTCATAACCTCTCAGCCGGACCCAGCAGGACGGTCGGTCTGACGCTGGAGGGCGGGAAGGACTGGACTCCCACCCTGTATATACGCTTGGTTCAAGACTACGGGCTTGAAAACGAGGTGGGTTTTGAAGACTAACTACTTAGCATTCTGCCAGTCTGAGCTCTTTGGAGCTGGTTCAAACTGCTCCATAACGCTTCAGTCCCTTATGATTCAGTGGTGGGGAGAAAGTCTGGCAACCCCTTGTTTGGACGCGCGAGAGCTTGATGGAGCCATAGCGCTACCATGAATGTTGTTTTGCCAGCATATTTAAAAAGGTCAGCATGCAGATATTTTTGACAGCACTTGACCTTTGGTGAGAGATATAAAAGAAGAGTTCGAATCGAAGTAAACGAGGCCGTGTTTATTTGTCCAAACGCTTAATGAAGCAAAAGTGTTTGTAAGCTAGTTAAAGAGCTGCGACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9425
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090266 Essential Splice Site 491 536 11 13
ENSDART00000127495 Essential Splice Site 494 729 10 16
ENSDART00000144028 Essential Splice Site 491 726 11 17

The following transcripts of ENSDARG00000062430 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 12308109)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 12161331
GRCz11 6 12396189
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCCACCCTGTATATACGCTTGGTTCAAGACTACGGGCTTGAAAACGAGG[T/A]GGRTTTTGAAGACTAACTACTTAGCATTCWGCCAGTCTGAGCTCTTTGGA
Long Flanking Sequence:
AGACAACCGCAGAGCATCCAGAGCACCCAAAAACCATAACACTTTTGAATTATTTTAATTTAAAAAATGTATCAGAGCTACAGCTAGGGTTTGTCTGTGGTGGCTTCTCTGAGAGTATAGCTTATGGTTGCTTAGCACACGAGAGGCATGATTATATTGGCATTTTTCATATGGTTTTAAATGTTATGTGTAACTCTTTCTTCAGCTGTATAAAATAATAATAAAAAAATACACTAGATTAATTTGTAATAAGTCTTTACAACTGAGTAATAAGTGTTCAGCTGAGGTTGTATCAAGGTTTCATAGCACTCTGTTTACTGTAGGTGGGAAGTGGACAACCTATCGTTCGATGGCTGAGGAGACACTTGATGCGGCCATAAAGGCTCATAACCTCTCAGCCGGACCCAGCAGGACGGTCGGTCTGACGCTGGAGGGCGGGAAGGACTGGACTCCCACCCTGTATATACGCTTGGTTCAAGACTACGGGCTTGAAAACGAGG[T/A]GGGTTTTGAAGACTAACTACTTAGCATTCTGCCAGTCTGAGCTCTTTGGAGCTGGTTCAAACTGCTCCATAACGCTTCAGTCCCTTATGATTCAGTGGTGGGGAGAAAGTCTGGCAACCCCTTGTTTGGACGCGCGAGAGCTTGATGGAGCCATAGCGCTACCATGAATGTTGTTTTGCCAGCATATTTAAAAAGGTCAGCATGCAGATATTTTTGACAGCACTTGACCTTTGGTGAGAGATATAAAAGAAGAGTTCGAATCGAAGTAAACGAGGCCGTGTTTATTTGTCCAAACGCTTAATGAAGCAAAAGTGTTTGTAAGCTAGTTAAAGAGCTGCGACCAAAAGAAAACAACAACAGGATCCTGACAAGCTGAGTGAACATGTTCAAAACCTTAGAGTTGACTGATGACTCATGGATAATAAAAGATTTTTATTTTTGTCACTCACAGGTTGCCCAGCACCTGGCAGCCACCTATGGAGGAAGATCGTTTGAAGTGG
Associated Phenotype:
Not determined