ZMP
si:ch211-117k11.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate chloride channel 2 (CLCN2) [Source:UniProtKB/TrEMBL;Acc:A5PMN6]
Human Orthologue:
CLCN2
Human Description:
chloride channel 2 [Source:HGNC Symbol;Acc:2020]
Mouse Orthologue:
Clcn2
Mouse Description:
chloride channel 2 Gene [Source:MGI Symbol;Acc:MGI:105061]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa10011 | Nonsense | Available for shipment | Available now |
sa18405 | Essential Splice Site | Available for shipment | Available now |
sa32880 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10011
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090260 | Nonsense | 47 | 940 | 1 | 23 |
ENSDART00000145720 | Nonsense | 47 | 307 | 1 | 8 |
The following transcripts of ENSDARG00000062427 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 16726297)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 17315585 |
GRCz11 | 2 | 16986754 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGYGTTCGCGGCCAGGCTCCAGAACTGCTGGAGTAYGAGAAAGACCCATG[T/A]GCCAAGTGTCAAGGTGGGTGTGCWGTATACATACACAGGCGCCAACTGCT
Long Flanking Sequence:
TGTCTATAGAGAACAAGAGATAAAATATATTCATTTGTTTTCTGAAGAAGATGAACATTAGTCTCAGGGATTTGGCATCACTACGATGAGTAATTAATGACATAAATTTCATTCATGGGTGAACTAACGCTTAACATGTAAATCTCACAAATAGCGTTATTATAGTAAAGAATCCAGCTTTTTTTTTTTTCAGGGATGGTACTCGGAGACAGAAATCTCTGACAGACTTGCTCCATTTATTTGATGGGCTTTTGAAGAGCCTGTTAAGTTGCACATTATTTCAGCGAAACGCTTCTTGGCTTGGTTTCCTTTTATTACCTTCCCAGCTGAAATCTTCATTGACTCCCGTCTCGCTTTCAGATGTATGGACGCTATACACAGGAGCTGGGGGCCTATGCCAAAGAAGAGGCAGCTCGTCTGCGTGAGGATGGAGGGCTGCGGAGGACCACCAGCGTTCGCGGCCAGGCTCCAGAACTGCTGGAGTATGAGAAAGACCCATG[T/A]GCCAAGTGTCAAGGTGGGTGTGCTGTATACATACACAGGCGCCAACTGCTCGCTGGCTGTTCTGCTTGCGTCATATAGCTTGCTATTTGCAGCAGTGGCTACAGAGCAAAGCTAGAAAAGCAGAGTAAATCCACAAGGATGAAGGGCAGCAGGAATGGAAAGAGGAAAAGGGTCGCGAAGGGCAGGAGACGAAAGAGTTATTGAGAACGTGCTGAAATTGAGGATTAGGTGAGAGCGATGCTGCGATAAGTAGGATGGATTTGACTGAAGATCTGAGTTTTACTGAGGCTGCTGTGATGCATCCACACTCTTGTTTGGGCCCACATGGAATCAGTGACAGCTGAGATTCACTAAAAGATTGACGTCTTTTTTGCAGAATTGGAAGGGCAGTACTTTCATCTCCGTGTAACACGGTGCTTGTCTATCATTTAACACCAGTATTTTGTCTGTCTCCTATTTGTTCTGCGTGATATTCAGAGAGCTAAGATTGTATTTTTTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18405
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090260 | Essential Splice Site | 139 | 940 | 4 | 23 |
ENSDART00000145720 | Essential Splice Site | 139 | 307 | 4 | 8 |
The following transcripts of ENSDARG00000062427 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 16778713)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 17263169 |
GRCz11 | 2 | 16934338 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TATGTGCTCTCAGATCTCTTTGTAACCCCCATTGGTCATTTCTWCCTCCA[G/T]GCTCTGGGATCCCAGAGATGAAGACCATCCTCCGAGGTGTGGTGCTGAAA
Long Flanking Sequence:
TGACAATCGCTCATTCACACCCAAAATGTAACAGAATAGTGCATGCCAATTAGTATGCACCTTATGCCTCTTCAGAGCTGTAATTATGTCGGCAGCACAGAAATGGATGTACGCTGGTCTGCATAGTAACACTTTCTCTTTATATAATTTTCAGCGTGAAAGCACTACTCACACTATTTTGACTAAAAATAACAGAGTAGTACATAAGCGCAGTCCTCTGCAGAGGTGTAATTATGTGCTGTGTGTGTGTGTCGGTGTCTGCAGCACAGAAGTGGATGTACCGCGGTCTGCACAGTAACATGTTGCTGCAGTATCTGGCCTGGGTCACGTACCCAGTGGTCCTCATCACCTTCTCCGCCGGCTTCACACAGATCTTGGCGCCACAGGCAGTGGGTGAGAGAGAGCAACGCACACACTGACTCACGTAATCAATTTACGTCAAACGGCCTTTATGTGCTCTCAGATCTCTTTGTAACCCCCATTGGTCATTTCTTCCTCCA[G/T]GCTCTGGGATCCCAGAGATGAAGACCATCCTCCGAGGTGTGGTGCTGAAAGAGTACCTCACTTTCAAAACCTTCGTCGCCAAAGTGATTGGCTTAACTTGTGCCCTTGGAAGTGGCATGCCTCTGGGCAAAGAGGTGCATGAGATGGGGATATCTGATCCCAGATAAGCTCGCTAATGCTGCAATACTTTAAGCCCTTGGCCTGTGATCACATCTGTTATTTCAATCTCCTCTTGCGTCCTCTAGGGACCGTTTGTTCACGTTGCCAGTCTGTGTGCTGCTCTGTTGAGCAAATTCATGGCCTTGTTTGGAGGAATCTACATGGTGAGAAACGCCTCTAGTAAAGCTGTCATTTTTCAGTAACTTTCTGACATTTCATACATTGGCAACACTTTATTATAACTTCTATTAAGAACATTAGCATTGCCAAATATTGTTGTTGTGTTTCATAAAAACGCCGTTATATTAAACAATTAGATATTGCTTTGTTAAGCACTCCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32880
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090260 | Nonsense | 826 | 940 | 23 | 23 |
ENSDART00000145720 | None | None | 307 | None | 8 |
The following transcripts of ENSDARG00000062427 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 16824488)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 17217494 |
GRCz11 | 2 | 16886071 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCGTCCTCCGCTGGCTAGTTTCCGGGACAGTGGCAACAGCAGCAGCGTCT[C/A]GGAGGTCACTGAGCTCCACAAGCTCTGGAGTCGCCACAAGAGCCTATCTT
Long Flanking Sequence:
ATAAAGTGGACTACTTTGCAGATTTCACCTGTTGCAGGTTATTTTTTAAACGTAACCCCTGTGAATAAGGAGAGACCACTATATATGTTTGCCCAACTTATTTCATTAAAAATTTTGTGTTTTAGCAATCCTGAAAGCTGTCTTATATGGAAAATATCACAGAGTAATATAAACAAAAAAACATTTTCATCACAATACTTTCATCGGTATACTGTATTCATATATTTGTGCATTTCAGACACACACCATTTTTTCACTTCTTGGCCTGGATCATGCCTATGTCACCAGCACCGGACGTCTAGTAGGAGTCGTCTCTTTGAAAGAGGTGCGTGACTGTATTCATTAAACAAGCTCTTCATTATGATTGAAAAACATCTTACCAACAGGTTGTGTTTGTTTCTAGCTACGTAAGGCCATTGAGGGCTCAGTAACCGTAACTGGTGTAAAGGTGCGTCCTCCGCTGGCTAGTTTCCGGGACAGTGGCAACAGCAGCAGCGTCT[C/A]GGAGGTCACTGAGCTCCACAAGCTCTGGAGTCGCCACAAGAGCCTATCTTTGCCACGGGAGATAAACCTCCCCGACCTTGATGACCAAACGGAGCAGCCATCCGAGGGCAGCCTGGTGAACGAAACTGAGTGCACAGAGCTTTCCAGTCAGAACAGCCCATTACACACAGATGACCAATCAGAGCTGCCCTACGCTGACACCTCACCCCAAGATGAGCCTCTGTCGCAGCTCCCATGTGACTGTCCAGAGGTGGAAGAGTCAGAATCTGTTGGTGAACACTGCCCAGAATCTACTGTGGTGGTGGGTGATGGAAACCCCTCGCCGTCAGATGGTCAGCCCGAATGACAGCTGCTGAACGATGGTAACACTCACTCCATTCACACCATAAGCTGGATTGTAGAGTCCGGTTGAGGAGAACCTGGAGGAAGTCTTTTAGCAGTGAAGCACACTTTCTGCTCCGTACTAATCAAAGCAACCCCAATCGCTGGTCCTGCCTTCA
Associated Phenotype:
Not determined