Busch Lab

ZMP

nlgn3b

Ensembl ID:
ENSDARG00000062376
ZFIN ID:
ZDB-GENE-060526-197
Description:
neuroligin 3b [Source:RefSeq peptide;Acc:NP_001159806]
Human Orthologue:
NLGN3
Human Description:
neuroligin 3 [Source:HGNC Symbol;Acc:14289]
Mouse Orthologue:
Nlgn3
Mouse Description:
neuroligin 3 Gene [Source:MGI Symbol;Acc:MGI:2444609]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa20395 Nonsense Available for shipment Available now
sa40413 Nonsense Mutation detected in F1 DNA Not yet available
sa17458 Nonsense Available for shipment Available now
sa1317 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20395
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090171 Nonsense 112 846 1 7
Genomic Location (Zv9):
Chromosome 5 (position 24985864)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 22813129
GRCz11 5 23316929
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCCTGGTCTGGTGTGAGGAACGCCACGCGCTTTCCTCCTGTTTGCCCA[C/T]AGACCGTTCGCAACGCAGTGCCAGACATAATGATGCCCGTTTGGGCCACC
Long Flanking Sequence:
CCTTAATTGTGCATACCTGGCTGCGGCGATGCCCACTGGATCTTCCTGAGTGTGTGGCATATGCTTGTTTTTGAGTGCTACATTGTCATTGTGTCAAAGCCGAGAGTGTCATTGAGCTACAGACAGAGCTTTACCAGTGTGTGTGTTTGTGTGCGCCGTAAAGAGGGATGATGATCTACACACAGTCAGCAGCTCACCTGGCGCTCACCCGCCTGCCCTGCCGGCCTCTGAACTCCGCTCTCCGCTGGCTGCTCGTGTGGTTGATGTGGTCAGTCTCTGTGGCATCAACGCTGACCTACCAGCCAACAGTAAACACAGCTCTTGGCAGACTGAGGGGGATGCGGGTCGCTGTTGCCACGGAGGGTCTGGGACCTGTGGATCAATATCTGGGTGTGCCTTACGCCGCTCCGCCTGTGGGAGAGAAGCGATTTATGCCACCCGATGCTCCGTCTGCCTGGTCTGGTGTGAGGAACGCCACGCGCTTTCCTCCTGTTTGCCCA[C/T]AGACCGTTCGCAACGCAGTGCCAGACATAATGATGCCCGTTTGGGCCACCTATAATATGGACACGGTCGCCACATACCTGCAGGAGCAGAGCGAGGACTGTCTGTACATGAATATATACGTGCCAACACAAAGTGGTGAGTACACTTGTTAAATGTGTACATGAGCTTGTTTATGTAATACATAGAACATCAGGGGGTTTGATTATGGAATTCTTCAAATGTTTAACTTACGGTTAATGTCGTAATTCTGATTCTTAGTATTTAAAATCTGTATTTAATGGTGCCATAGATTAAATTTTGCCAATGATTCTAGACTTTGATTGAGTATCTTAAATTGTTCTCTGTCATACAAACATACAGTATGTGGCTTAGGTAAGTTCAAAAATTCTCCAGACACCATTTTATATGCTCATTTAAAACTACAGTAATTACCTCTGGAATGAAAAGCTCACTTTTGACCATATTTGGAATGGTTGATGAATGTTAATGTCTTCTCTGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40413
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090171 Nonsense 428 846 6 7
Genomic Location (Zv9):
Chromosome 5 (position 24957417)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 22784682
GRCz11 5 23288482
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCGATTTTGACTTCACTGTGTCTGACTTTGTGGACAGTCTCTATGGTTA[T/A]CCAGAAGGGAAGGACACTCTTAGAGAGACCATAAAGTTTATGTACACTGA
Long Flanking Sequence:
GAAAAACGGCAGTGTTGGCAGGTGTGACAGAGATTTCCCTGTATTTCGCTGTCATAATCGGGAGATCACAATAAATTTACTCAGAAAAATCCAGACCAAAGCAAACACTACAGTACTAAGTTACTACAGTAATTTTTTTAATCTCTTAATGCAAATCAGGTTGTGTGAGGAAGCCGATTTAATAGTTTGTGTGTGTGTTTTACGCAGGACCTGGTTCTCTGCATGCAGAAGCGCAGCTACAGGGAGCTGGTGGAGCAGGAAATCCAGCCTGCACGCTTCCATGTGGCCTTTGGTCCAGTCATCGACGGCGACCTCATACCAGATGATCCCGAAGTGCTGATGGAGCAGGGGGAGTTCCTCAACTATGACATCATGCTGGGCGTCAACCAGGGGGAGGGATTCCGCTTCGTGGAGGGCGTGGTGGAGCCTGAAGAGGGTGGAGTTTCTGGCTCCGATTTTGACTTCACTGTGTCTGACTTTGTGGACAGTCTCTATGGTTA[T/A]CCAGAAGGGAAGGACACTCTTAGAGAGACCATAAAGTTTATGTACACTGACTGGGCTGATCGAGACAATCCCGAGACCCGCCGGAAAACCCTCGTGGCCATGTTTACAGATCATCAGTGGGTGGAGCCAGCCGTGGTGACAGCCGACCTGCACGCACGTTACGGCTCTCCGACCTTCTTCTATGCCTTCTACCATCACTGCCAGAGCCCCATGAAGCCCCCATGGGCTGACTCCGCACATGGTGATGAGCTGCCCTACGTTTTTGGTGTTCCGCTTATCGGTCCGACAGAACTCTTTCCCTGCAACTTTTCCCGTAATGATATCATGCTGAGTGCTGTCGTCATGACCTACTGGACCAACTTTGCAAAGACTGGGTAAAACAGACCACAGCATTTCAAAACACCATGCAAAATGACCATACAGTCCGAGATAAAAGCAGTACAAAGTGAAAAATTATAATTGACAATGAATGCAGCAATAAAATATCTAAATTATTTAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17458
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090171 Nonsense 514 846 6 7
Genomic Location (Zv9):
Chromosome 5 (position 24957159)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 22784424
GRCz11 5 23288224
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCATGAAGCCCCCATGGGCTGACTCCGCACATGGTGAYGAGCTGCCCTA[C/A]GTTTTTGGTGTTCCGCTTATCGGTCCGACAGAACTCTTTCCCTGCAACTT
Long Flanking Sequence:
GAAATCCAGCCTGCACGCTTCCATGTGGCCTTTGGTCCAGTCATCGACGGCGACCTCATACCAGATGATCCCGAAGTGCTGATGGAGCAGGGGGAGTTCCTCAACTATGACATCATGCTGGGCGTCAACCAGGGGGAGGGATTCCGCTTCGTGGAGGGCGTGGTGGAGCCTGAAGAGGGTGGAGTTTCTGGCTCCGATTTTGACTTCACTGTGTCTGACTTTGTGGACAGTCTCTATGGTTATCCAGAAGGGAAGGACACTCTTAGAGAGACCATAAAGTTTATGTACACTGACTGGGCTGATCGAGACAATCCCGAGACCCGCCGGAAAACCCTCGTGGCCATGTTTACAGATCATCAGTGGGTGGAGCCAGCCGTGGTGACAGCCGACCTGCACGCACGTTACGGCTCTCCGACCTTCTTCTATGCCTTCTACCATCACTGCCAGAGCCCCATGAAGCCCCCATGGGCTGACTCCGCACATGGTGATGAGCTGCCCTA[C/A]GTTTTTGGTGTTCCGCTTATCGGTCCGACAGAACTCTTTCCCTGCAACTTTTCCCGTAATGATATCATGCTGAGTGCTGTCGTCATGACCTACTGGACCAACTTTGCAAAGACTGGGTAAAACAGACCACAGCATTTCAAAACACCATGCAAAATGACCATACAGTCCGAGATAAAAGCAGTACAAAGTGAAAAATTATAATTGACAATGAATGCAGCAATAAAATATCTAAATTATTTAGATGATAGGTCTCAAACTCAGTTCCTGGAGGGCCACAGCTCGGCACAATTTTGCTCCAACACTGATCAAATACACCTGATCCAAATAATCACACTGCTCAAAAAAATCTTGAACACCTTGATTATTTGGATCAGGTGTGTTTGATCAGGGTTGGAGCAAAACTGCAGAGCTGCGGCCCTCCAGGAATTGAGTTTGAAACCTATGATCTAGATAAGGGGTGGGCAAACTCTATCCTGGAGGGCTGGTGTCCTGCACAGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1317
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090171 Nonsense 601 846 7 7
Genomic Location (Zv9):
Chromosome 5 (position 24955245)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 22782510
GRCz11 5 23286310
KASP Assay ID:
554-1231.1 (used for ordering genotyping assays)
KASP Sequence:
GACCAACTCTACCTGCACATTGGGCTGAAGCCTCGCGTTCGAGATCACTA[T/A]CGGGCAACTAAAGTGGCCTTCTGGAAGCAYCTGGTACCTCACCTGTACAA
Long Flanking Sequence:
CTTACAGCTGCAACCCATATCTGGGAAACATCTATGCACATTCATTTACACGTACACTACGGACAATTTAGCTTACCCAATTCACCTGTACTGCATGTCTTTGAACTGAGGGGGAAAAAGGAGCACCCAGGGGAACCTGGATGCCACCGCATCGCCCCTAGTTCATTCAATCAAGCATTTATTAGTGATGAAAACAGTTGTACTGCTAAATATTTTTACTAAATATTTCTATGACTTCTAATGTGTAAAAAATGCTTGAAATAAAGGTTTTTAATTTTTTTATCTTACAGACCTTTAGTTTTTAACCATGTGTTGTTATAGTTCAGATCTAATTACTTGTATTTTGTGTGTCTCAGGGATCCGAACAAGCCAGTTCCTCAGGACACCAAATTCATCCACACCAAGGCAAACCGTTTTGAAGAAGTGACATGGGCCAAGTATGGTCCTCATGACCAACTCTACCTGCACATTGGGCTGAAGCCTCGCGTTCGAGATCACTA[T/A]CGGGCAACTAAAGTGGCCTTCTGGAAGCATCTGGTACCTCACCTGTACAACCTGCATGATATGTTCCACTACACGTCCACTACCACACGGGTTCCACCTCTTTTGACCACACACAGCTCTCACAGTGCCACGCCACGCCCAGGAGGTAACAAGGCCCGTACTTCTGGTAAACAACCCCCCCAGTCGACAGCCCGCAGTGGGCCACTAGTCATTGCCAATCCCCGTGATTACTCCACAGAGCTGAGTGTCACGATCGCCGTCGGAGCTTCACTTCTGTTCCTCAACGTCCTGGCCTTTGCTGCACTTTACTACCGCAAAGACAAGCGGAGTCGACAAGACACGCCCCCTCAGCCCGCCCCTCAGCGCCAAACCCCACCTATTGACCTCAACTATGCGCCCACTTCCATCTCAGGGGGGAATCAAGAGGAGTTGTCACTGTGTGACCCCCTGCGTTTGACCCCAGCCTCATCTCCACGGGATTATGCTCTTACACTCCGCCG
Associated Phenotype:
Not determined