Busch Lab

ZMP

chaf1a

Ensembl ID:
ENSDARG00000062152
ZFIN ID:
ZDB-GENE-030131-5366
Description:
Chromatin assembly factor 1 subunit A [Source:UniProtKB/Swiss-Prot;Acc:A0JMK9]
Human Orthologue:
CHAF1A
Human Description:
chromatin assembly factor 1, subunit A (p150) [Source:HGNC Symbol;Acc:1910]
Mouse Orthologue:
Chaf1a
Mouse Description:
chromatin assembly factor 1, subunit A (p150) Gene [Source:MGI Symbol;Acc:MGI:1351331]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa43836 Nonsense Mutation detected in F1 DNA Not yet available
sa43835 Nonsense Mutation detected in F1 DNA Not yet available
sa18462 Nonsense Available for shipment Available now
sa3192 Nonsense F2 line generated Not yet available
sa29775 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa43836
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089534 Nonsense 54 838 3 16
ENSDART00000111711 Nonsense 54 863 3 16
ENSDART00000142027 Nonsense 54 798 3 17
Genomic Location (Zv9):
Chromosome 22 (position 22661579)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22273215
GRCz11 22 22298193
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCCTTTCAAAAGGCTCAACCCTGAACCCAAGGAATGCAATGAGCCCAAA[A/T]GAACCAAAGGTCCCGTTGCTCCCAAGTGTTCTGAACCCAGTGATCAGGAA
Long Flanking Sequence:
TAAAACATATGATATGAATTTTACACATCTTAAATGTAAAATTAAAGTTACCAGATGTAGAAGGAGAGACACAGGGAGGGAGAGACAAAGAGAGTAAGTAGGCCTCTAAGAGGCAGAGAAGATAGACTCCAGAGGAGGAGAGGAGCAGAGCAGGAGAGCACAGACCAGGAAATGACAGGGAAAGAGCCAGGGCAGAGTTTTACACATATTTTGTATCTTTCTTGACCATGTGACTAAAGCCCAAATGCTGAGACATTCAAACTGACCAATCAACATGTGAACACATCATAAAACCCCCCAAAGTCCACACACCAGGCCCTGATCTTATCAGTATGTGTTTTTGGAGTCAGTATGGACCTTCTTTGATAAAAGACTTGTTTTTCCATATAAACATGCATATGATATTTAGATTCTTACACATCTAACAATGTCACCTCCCTTCAGCACGTCTGCCTTTCAAAAGGCTCAACCCTGAACCCAAGGAATGCAATGAGCCCAAA[A/T]GAACCAAAGGTCCCGTTGCTCCCAAGTGTTCTGAACCCAGTGATCAGGAAAATGATCAGGACAGCTCCTCCATCTCGCACCATGGCCCGGCTCTGGTGAACGGCCGTGGTCCTCTTGATTGCTTCATGAGTCGGCGGAAGCGTTCCCCGCTCCGCTCAGCCCCTGAAGCCACTATCGACCTAACTGAAGACTCAAACGATTCTGCCAAACAGCAGCCGGCACCTCCTATCGCTGCCACCTGCCCTCTTAGTGAAGAGAAAACAAAGACCTCTGAAGGTACTACAGAACCGACTATACCACTGACAGAGGAGGAGACTGAAAAGGATGAAGCTGAAGATGTAGATGCCCTCCCGCTTCTGGACATCACTCAGGACTCTGACACTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGCAGCAGCAGGAGGCTGAAGTCAGTCATGGGAATGAGTCTGTGCTGTCCACAGGGTCCACCAGCTCCGCCTCTGTGATCGCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43835
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089534 Nonsense 390 838 8 16
ENSDART00000111711 Nonsense 415 863 8 16
ENSDART00000142027 Nonsense 350 798 9 17
Genomic Location (Zv9):
Chromosome 22 (position 22653216)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22264852
GRCz11 22 22289830
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTAACTCGAGTACAATGTGAAGACTCTGTGCTAGAGGACCTGGACCGCTA[T/A]CTTGCCCAACCCGACAGTACTCTGAATGGACTGAAGGACTGGACAGGGCA
Long Flanking Sequence:
TAGTTTGAGCATATCTGCCCTACACTGTTCTTATTAGCTAACCAAGTACAGGCTGCTATGTTTTAGGTTGGAATGTTGCTTATCAATAAATGCAGTTGTCATATGATATTTGTAATATACATTTATAAAAACATGAATAATAAAAAGCTTCAATTAAACCCTGTAATCAGTGATCAAATTGATTAAGATGCATCTTTAAAAGGTAGTTCACTCAAATCTAAAAATTGTCCTTCACTCAACTTTGACTTGTTTTAAACCAGTTTTTTTGTTCTGTTAAAAATGTTAGAAATAATCAATCATCAACATTCATAGTATTTGTTCTTTTTGGCCATTTTGTCAAGTAATGTGTTAATGTAGGCATTTTTGTATGTTCTTGTGTTTCAGACTCTGGCTTCTGCCTGCGGGAAGTTTGCTCCGTTTGAGATCAAAGCACACATGTCTCTGGCACCGCTAACTCGAGTACAATGTGAAGACTCTGTGCTAGAGGACCTGGACCGCTA[T/A]CTTGCCCAACCCGACAGTACTCTGAATGGACTGAAGGACTGGACAGGGCACAAACCTCGCAGTTCAGGTCCCACCAGACCCAGGCATAGTGCACAAGGGTAAAGCCACACTGAGCCTGTTGCTTGGATTTGTTTGTATTCAATATATACTCGTGCAGAACACTGTCAGCTGCATTTGTTAGAGGGATGTCAAAAGACATTTTATTTGGTGTATGTTCTGTGTTATTAGAGACTGTGTGGTCATAACTGAGAGCCAGAAGGCAGATGATGGACCAGACCGCAGTCGTTACGGCCGCATGAAGCTCCTGCATTTCCATGACAACTATCGGCCAGCTTATTGGGGAACCTGGAGCAAAAAAAGCACCCACATCTCGCCACGCTGCCCGTTGAGGCTGGACAAGGTAAAAAAACATGGCAATTTTTTTGCATTTTTTAAATTGCCATGCATAACTTTTTTAGCAAAATTTTTGGATCCCATCTTAGTTGGCCTGTACAATAACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18462
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089534 Nonsense 493 838 10 16
ENSDART00000111711 Nonsense 518 863 10 16
ENSDART00000142027 Nonsense 453 798 11 17
Genomic Location (Zv9):
Chromosome 22 (position 22651129)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22262765
GRCz11 22 22287743
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGTCKTTATCAGGATCTGCTGGATTATGAGGTGGACAGTGATGAAGART[G/A]GGAGGAGGAGGAGCCAGGAGAGTCTCTGTCACACAGTGAGGGGGTGAGCK
Long Flanking Sequence:
TCACTTTTTCTGACCATTCTCTGTAAACCCTAAAGGTGGTTGTGCATGAAACTTCCAGTAGGTCAGCAGTCTCTGAAATGCCCAGATCAGCCCGTCTGGCGCCATCAATCATGTCACGTTCAAAGTCACTCAATTCGCCTTTCTTCCTCATTCTTATGTTCGGTTTGAACTGCAGCAGATCATCTTGACCCTGTCTACATGCTTAAATACACTGAGTTGCTGTCATGTGATTGGCTAATTAGAAATTTGCATTAACAAGCAGTTGGAGAGGAGCAGTTGGACAGGTGTACCTAATAAAGTGTCCAGTGAGTGTATGTCAATTTCACCCAACACAAAATTGTCTTAGTAGCTCAACTTTTGTGGTGACATTTGTATCTTGTTTACCAAAGCTTATTTTGTTTTTAATGTGCTTTCCTAGGAACCTAAATTGACAAATTCTAGGTGATTTCTGTGTCTTTATCAGGATCTGCTGGATTATGAGGTGGACAGTGATGAAGAGT[G/A]GGAGGAGGAGGAGCCAGGAGAGTCTCTGTCACACAGTGAGGGGGTGAGCGATCTGACATCACTCTACTGCTACAAACTAGCTGTGCTTTACATATTTAAACATGGAGATGTTAATCTGGCTTTTTGCTCCAGGATGACGATGACGAAGCAGGAGAGGACGACGATGATGATGATGGGTTTTTTGTGCCCCATGGTTATCTCTCAGAAGGGGAAGGAGCACTTGAAGATGAGGTACTTAAAAGTTAATTATAATCAGCCATTTTTGATTGCCCCATTTGGTCATGTCTCAATGCTAATGGTCTGCTCTTGCAGGAGGGTGGAGACCCAGAGAAGCAGAAGGTGCGTCAGAGGATGAAGGCTCGTGAATGGGAGAATGAGCTGATGTCTAAAGGGAAGGTGAAGGTTTTGGAGGCTGTGGTACGCGGCTGCTTTTGGGAAGGAGAAAAGCCCTTGCCTGACTTCCTGCAACCATACGCTGTCTGCATGCTGGAGCCTTTATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa3192
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089534 Nonsense 649 838 13 16
ENSDART00000111711 Nonsense 674 863 13 16
ENSDART00000142027 Nonsense 609 798 14 17
Genomic Location (Zv9):
Chromosome 22 (position 22650148)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22261784
GRCz11 22 22286762
KASP Assay ID:
554-3341.1 (used for ordering genotyping assays)
KASP Sequence:
GGGAATGTGAATAGCAATAAGGTGATAATCACMGAGTTCCTCGAGTTTTG[T/A]CGCCAACAAACCTCCTCGCCCACAGAAAGCCTTCTCAATACGACAGAGAG
Long Flanking Sequence:
TGCATGCTGGAGCCTTTATCTAAAGATGAGGCCTCCACCCCTGAACAAGACGCCTCACGCCAGCAGAGGAACGAGAAACGTGAGTACATGCTTGACTTGGGTATCAGATATTATACAGTAAAACCTGAAGACTACTTAACTGAACTCTGTTTTGCTGTCTTAATTTGCTGGACAATTTCTTATTCATTGCTCGACAGTTTTGTTTATCTGAACCTTAAACAATATTCAAGTGTGATGCAAGAACAAAGCTACGATGACATTTTCACCTTCATTAGTTTACAAAGCAAGACATTCACACCATTAGCTGTGCAGGAAAGCATTGAAAATTACCAGTGAAAATTGACACCTAAAAAATGAATAATGACAATTGAAAAGACTTGTGTTAAATTATTCATTTATTGTGTTTTTCGTTTCCCTCCAGTGCTTACAATGCTGCTGCCATTGCTGCATGGGAATGTGAATAGCAATAAGGTGATAATCACCGAGTTCCTCGAGTTTTG[T/A]CGCCAACAAACCTCCTCGCCCACAGAAAGCCTTCTCAATACGACAGAGAGCATTCCACCCAGGTAAATCAGTTCACAGCCATACTGATCCTCAGTGGTTAAGTCATCATGCAAAACAGATTCTATAGAGTTATGTAGTGATGTCATTTCATAGGGCATGCAGACTGTAACATCATCCTTGTTCAGGGATGGGCAAACTTGATCCTCGAGGGCCGGTGTCCCTGCAGAGATTTGTTCCAACACTAGTCAAACACACCTGAACAAACTAATCATAGATTTCTAGTGATATTGAAGTGATCTCTAAGCAGGTGTGTGTGATTAGAGCTGGAGCTAAACTGTGCAGGACACCAGCCCTCCAGGACTGAGTTTGCCCACCCCTGTCCTAGTTCCTTCAACAAAGTCAGAATAAGGTCAATAAAATTTGATTTCATTATGCACACATTTTCTTTTATATCATAAATATAGTCCCCTGAAATAAAAGTAAAAGTTATAGTGTTTTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29775
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089534 Nonsense 652 838 13 16
ENSDART00000111711 Nonsense 677 863 13 16
ENSDART00000142027 Nonsense 612 798 14 17
Genomic Location (Zv9):
Chromosome 22 (position 22650141)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 22261777
GRCz11 22 22286755
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGAATAGCAATAAGGTGATAATCACCGAGTTCCTCGAGTTTTGTCGCCAA[C/T]AAACCTCCTCGCCCACAGAAAGCCTTCTCAATACGACAGAGAGCATTCCA
Long Flanking Sequence:
TGGAGCCTTTATCTAAAGATGAGGCCTCCACCCCTGAACAAGACGCCTCACGCCAGCAGAGGAACGAGAAACGTGAGTACATGCTTGACTTGGGTATCAGATATTATACAGTAAAACCTGAAGACTACTTAACTGAACTCTGTTTTGCTGTCTTAATTTGCTGGACAATTTCTTATTCATTGCTCGACAGTTTTGTTTATCTGAACCTTAAACAATATTCAAGTGTGATGCAAGAACAAAGCTACGATGACATTTTCACCTTCATTAGTTTACAAAGCAAGACATTCACACCATTAGCTGTGCAGGAAAGCATTGAAAATTACCAGTGAAAATTGACACCTAAAAAATGAATAATGACAATTGAAAAGACTTGTGTTAAATTATTCATTTATTGTGTTTTTCGTTTCCCTCCAGTGCTTACAATGCTGCTGCCATTGCTGCATGGGAATGTGAATAGCAATAAGGTGATAATCACCGAGTTCCTCGAGTTTTGTCGCCAA[C/T]AAACCTCCTCGCCCACAGAAAGCCTTCTCAATACGACAGAGAGCATTCCACCCAGGTAAATCAGTTCACAGCCATACTGATCCTCAGTGGTTAAGTCATCATGCAAAACAGATTCTATAGAGTTATGTAGTGATGTCATTTCATAGGGCATGCAGACTGTAACATCATCCTTGTTCAGGGATGGGCAAACTTGATCCTCGAGGGCCGGTGTCCCTGCAGAGATTTGTTCCAACACTAGTCAAACACACCTGAACAAACTAATCATAGATTTCTAGTGATATTGAAGTGATCTCTAAGCAGGTGTGTGTGATTAGAGCTGGAGCTAAACTGTGCAGGACACCAGCCCTCCAGGACTGAGTTTGCCCACCCCTGTCCTAGTTCCTTCAACAAAGTCAGAATAAGGTCAATAAAATTTGATTTCATTATGCACACATTTTCTTTTATATCATAAATATAGTCCCCTGAAATAAAAGTAAAAGTTATAGTGTTTTCACACCTGC
Associated Phenotype:
Not determined