ZMP
im:7147934
Ensembl ID:
ZFIN ID:
Human Orthologue:
IFFO1
Human Description:
intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:24970]
Mouse Orthologue:
Iffo1
Mouse Description:
intermediate filament family orphan 1 Gene [Source:MGI Symbol;Acc:MGI:2444516]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa28625 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa36088 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa28625
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089386 | Nonsense | 364 | 640 | 3 | 9 |
| ENSDART00000123011 | Nonsense | 364 | 614 | 3 | 17 |
The following transcripts of ENSDARG00000062108 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 19206913)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 17237236 |
| GRCz11 | 16 | 17145213 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTATGTGTTTTTGTCTATATGTGTAGGACCTACAGGAGAGTGAAGTATG[T/A]CAGGATGAATTGGCCCTCAAGGTCCAACAGCTGAAAGCTGAACTTGTGCT
Long Flanking Sequence:
AAAATTGTATTTAATGTTTACAATGCAAATCCTATTAGATACATTTGTTTGGTAAACAAAGCAAGTCTTTTATATAATATATATTCTAAAAGACAGTAACTATTACTTTACAAAATGTATTTTAGGCAAATCATATGAACATTTTCATATTTATAAAATGACTGAAATTAATTTAAAAACTGAATAAATATAAAATGACACACATTTACACACAATTAAATAAATAGACTCAATGATGGGTTAAAAATTTGTGGAAATCTGCAGATTTCTGTACGCGCAGATTCAGTGTGGGCATACCAATACTGTATGTTCATTTTTTTCTGTATTTGAGTCAGTAGATTTATTGCCATGCTGCATGATATGAATTAAAGTATACGAATACCAAATGATGATATGTGCACAATGTCCATATGTTTTCTGTATAGCAAAAATAATTATTTATAATATCTATGTATGTGTTTTTGTCTATATGTGTAGGACCTACAGGAGAGTGAAGTATG[T/A]CAGGATGAATTGGCCCTCAAGGTCCAACAGCTGAAAGCTGAACTTGTGCTCTTTAAAGGACTCATGAGCAATGTGAGTGTCAGAAGCAAAACATACTCAGTACAAGTACACACAGCTGGCTCTACTATAAATGCATATTGCAAACTCACTGAAGCACACAGGAAATAACCACTCAATTAAAAATAGCTTTCAGGTTCAAACACTGATACCTCGTTTCCACTGAGTGGTACAGGTACAGAAAGCTGTAAAGGCGGTTCATATATTGTGTGTTTGCACGCTCAAGTTCATTATTTCAAATACAGGTTTTTGCCAAAAAATGTGAATATTGAGGGGAAACTCAGTTTATTTCAATAATTTGTTTCAAAAAGTGAAACTTGTGTGTTATTTTAATTCACTAAACACAAAGTGAAATATATCAAGCCTTTGTTTGTTTCAATTTGAATGATTATGAATCAAAGATGACAAAAAACTTCATGACAAAATTCAACATTGTAGCTCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36088
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089386 | None | None | 640 | None | 9 |
| ENSDART00000123011 | Essential Splice Site | None | 614 | 11 | 17 |
The following transcripts of ENSDARG00000062108 do not overlap with this mutation:
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 19176988)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 17207311 |
| GRCz11 | 16 | 17115288 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAAACGGCAGAGAAGCATCAAACAATTGCAGCGATAGTTGTCCAGCAG[G/T]TGAGAAAGCATGTTGAGCTGGTACTTTTTTATTAGAATCATATGTGGTAT
Long Flanking Sequence:
ATAAGTAGAAGTCAACCAAAGCTTTGTTTGAGAGACACAAATATACTTATCCCAAGTTCCTCTGATGCAAAATGGTATGTTTATTTAAAAAAAAAAAAAAAAGCTATCTTTTCCTTATTTAAAAGTTTCTTTTCTAGAGTAGGCCTATGTGATGCTGTTCGAATGAATGTATGATTTTATTATTTACAGATGCGTACGACTGTGTTATCTGTAGCCTTGGTGATGCTGACAGGTCATCTGATATATGGCCTCCCTATGGTAAATTTGTATGCTCCGATAACATCCACTGTATGTGTTATATTGTGTTAACTTCATGTAACTTGAAATTGTGTTGTAAAAAGCTCTTTCTTTTCAAATTAATCACTTCAAAAATTAATTGTGTCCATATTAGAGGCTTTAGCTTATGATTTTCTTGTGTGTTTCCATTTGTTTTTAGCATAACGGAAAGGTGAGAAACGGCAGAGAAGCATCAAACAATTGCAGCGATAGTTGTCCAGCAG[G/T]TGAGAAAGCATGTTGAGCTGGTACTTTTTTATTAGAATCATATGTGGTATCACATTCTTCGAATTATTTCCTTGTTTTTGCAGTGTGCGTGAGTGTACTTTTCTGTCACAACACTTCCCAGTATTACGTATGTGGTCTGGTCAGGAAATTGGCTAAGAAATCGATAGTTATTTGTTAAGTTTGTCTTTATCGTTCGCTCTTTTTTTTCTTTCTCCCTCTCTTCATTTTCTCTCATGATGGGAAATGGTTTGCTCTGACACAGAAGAGTAAACCACTTCCTTCATTAAAATGCTACTGCCGGTTTGAGCTTCTCTGCAACGTCCTGTTTTTGATGCTATTTCTCGTCTCTCTTCTTAAGAGACCTCAGTCAGCAAGTATGACTTTGTGCACAGAAGTGTGTGTGTGTGCGCACATATATGTGAGTGCATCTGTCTGCTGAGCACCCACATCCGTTTTTTAGAGATTCAGCATGTGCCCTTTAAGCGGAGTTCTGTGCACAG
Associated Phenotype:
Not determined