Busch Lab

ZMP

si:ch211-236l14.3

Ensembl ID:
ENSDARG00000062054
ZFIN ID:
ZDB-GENE-030131-3250
Description:
Novel protein similar to vertebrate carnitine palmitoyltransferase 1A (Liver) (CPT1A) [Source:UniPro
Human Orthologue:
CPT1A
Human Description:
carnitine palmitoyltransferase 1A (liver) [Source:HGNC Symbol;Acc:2328]
Mouse Orthologue:
Cpt1a
Mouse Description:
carnitine palmitoyltransferase 1a, liver Gene [Source:MGI Symbol;Acc:MGI:1098296]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa38079 Nonsense Mutation detected in F1 DNA Not yet available
sa14518 Nonsense Available for shipment Available now
sa38080 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa38081 Nonsense Mutation detected in F1 DNA Not yet available
sa38082 Nonsense Mutation detected in F1 DNA Not yet available
sa24683 Essential Splice Site Available for shipment Available now
sa25226 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa38079
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Nonsense 151 774 3 18
ENSDART00000137612 None None 584 None 14
Genomic Location (Zv9):
Chromosome 25 (position 24326445)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23505558
GRCz11 25 23603106
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCTGGATGTTTAACCAGCATGGAACTCTGTCCTTAAAAACAAAGATTTG[G/A]TTGGTAAGTGTGGAGAAACAGATAGATAATCCATCTCTTAATGTAACAAT
Long Flanking Sequence:
TCTTGAAGTTATTATGAAATGTTGCAGCCGTTTATGAACCATATGTAACTACAGAGGTTATAATGACAAATCATTACATAGTGTTGCATAACAAGTTTTGGTAAAGTAGCCATTTATTTTAATCAACATTATTATTAAATAAATATGTGAGTAGTGAAATGAAGTCAATGAATTCAAATTTCGGCAGCTTCATTAACTACTTATCAACAATTAACTGATTTTAATTAGATTTTTAATTGGTGTTTTTATAGTATTGCGCTGTGTTGTTGAAATCTCTTACAGCGTCTATAAGGGCACTGCAGTTGTCACCTAACAGCTTTGTTTCCCTGCAGTAAATACATAACAGAAGATGGCCAACGTATTGTTGGTGGTGTGCTTGTTGGCACGGGACTGTGGATTGCTGTGACTTTCGTTATGAGGAACGCTCTCAAGTACTTGCTGTCCTGGCATGGCTGGATGTTTAACCAGCATGGAACTCTGTCCTTAAAAACAAAGATTTG[G/A]TTGGTAAGTGTGGAGAAACAGATAGATAATCCATCTCTTAATGTAACAATTCACCCATTATTTGGCACCTTGATTGTTAAATGAAATCTAAATTTATTATTAAGTATTATTGATTATTGATTATTTAATGACATGAATGTCTAAATGACAAATAGACATTAACGTCAAAAAAGTGTCAAAAGCGCTAAAGGATTTGATGTCAAAATCTTGGCGTCTATTAGACATCTGCACATTAATGCCCTTTTGACCACCAAAATAATCACACAAAGTGTTATAATATAATGAAATTATATTATAATGAAAAGTTTTACTCATCTGAAAGCTTCAATTCCAATTGAACATGTCAAAAATTTATTAAAAGACAGTTCTGAAATCAATTTTTGATTTTTGACTTCAATTTTAGATAGAAATTTAATGTTGTTTAGATTGACATCAAATTGATAAATGTTCTTGACACATTTTTATTTAATTTTGACATCAAGGTGCCCACAGAGTTTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14518
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Nonsense 166 774 4 18
ENSDART00000137612 None None 584 None 14
Genomic Location (Zv9):
Chromosome 25 (position 24327289)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23506402
GRCz11 25 23603950
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCTGCTCAGGTGTTGGTGAAGTTATTTTCTGGGCCAAAGCCAATGCTGTA[C/A]AGCTTCCAGAGTTCACTACCACGGTTGCCAGTGCCTCCTGTAAAAGACAC
Long Flanking Sequence:
TCAAAAATTTATTAAAAGACAGTTCTGAAATCAATTTTTGATTTTTGACTTCAATTTTAGATAGAAATTTAATGTTGTTTAGATTGACATCAAATTGATAAATGTTCTTGACACATTTTTATTTAATTTTGACATCAAGGTGCCCACAGAGTTTTTTTAGAGTATCATTTTTAAGGTAAACAATTCATTTAACTTGCTTTAAGTAAACCAGCTTAGTAAATATTTTCCTAACTCTATATCCAGCAAGAGTCTAAAGTCTTAATGCACTTGTTTTATAACATAATCTTAGCACTGTTCCGGTTTTAGCAGGTTTTTATTGAATTTAGCTTTCTCTATGTAATTGTGTCAAAGTGATTGCGATATATCTCTTCACTAGAAAAGGCTTGGCTTTATCATTGGAAAGTATTCCGGCTGGTCTCATGTTTGACTCTTGACCCAATGCTATCGCTATCTGCTCAGGTGTTGGTGAAGTTATTTTCTGGGCCAAAGCCAATGCTGTA[C/A]AGCTTCCAGAGTTCACTACCACGGTTGCCAGTGCCTCCTGTAAAAGACACCGTTAGAAGAGTAAGTCACATCTTAACTTTATACAGTTTATTAAAAGATCAAATATGATGTTTATTAGAAATGCACTGATTGACAGGCCAGAAATTGTTGTCTATCAGACCCACAATTGGCATATTTTTGATTTTATTATAAGAAATTGTGATAGTCTCTCTGTTCCTAATGCTAACAGGGGTCTCAGACTGCGGGCCCTCCTCCTCCCTCTGGCCTGCAGTTGACATCAAAATAATACTAGATTCAGCCTGCCAAAACAGATTTTTTTGTACCTCTATCATTGTTGTGCAGTTGTTTCAGGCCACTTGTGGTTTTTACCCGCCACCTAGTCGACATTTAAAGCACTGCATTCATATTACTGCATTACAGGCTTACTTTCATTTTCTCTCAGCGTGTGGTCGAGAGTAACACACATGTGTTTTAATTTTATGGCTGATTTTAACGTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38080
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Essential Splice Site 232 774 5 18
ENSDART00000137612 Essential Splice Site 46 584 1 14
Genomic Location (Zv9):
Chromosome 25 (position 24332536)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23511649
GRCz11 25 23609197
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAAACTTCAGTGGTACCTGAAGCTGAAATCCTGGTGGACTTCCAATTAC[G/A]TAAGATCACTCAATGTTTAATGTTTAATCGCATTGTCAAACTATTATTCT
Long Flanking Sequence:
ATACATATGTGTGCTCTGGTTCTTTACAGTACTAACCAAGAAAATCACAATTATTCCTGCTTGCCTTTAAGTGTCACCTATAGGCAGAAAGTGAATCTGCATTTTTCATTCAATACGTCAACTGTTTTGTATGCATCATGTAGGATAATTCCAGAAAGCTAATGTCAAATCATTCTGTGATTAGTTTTAAACATTTTTACCATATATTTATATTTAACATATATACTTTTCAACATATGTTTAGATTTTTAAAACCATAAAAACATAATCATTTGAAAAAGGACATCGGTACCATGATTTAATAAATTGGAATCAGCCTAAAGCCTACCTCACCTATTCACATATGTATTGTTTTTTTTCAGTACCTGGAGTCGGCACGTCCTCTGATGGATGATGAACAGTACAAACGTATGGAGGGTTTAGCAAAGGACTTTGAGAAGAATTTGGGCCCCAAACTTCAGTGGTACCTGAAGCTGAAATCCTGGTGGACTTCCAATTAC[G/A]TAAGATCACTCAATGTTTAATGTTTAATCGCATTGTCAAACTATTATTCTACAGGCATTCTTATCTCATTAGAACTGATTCCGTAGCGAAAGGCAATAGAGTTCAATGCTAAAAGTGATTTTGAGGTCTGCTTTTTTTAGATTATCTTTTTGGTTGAGCAGTAGTTTGACAGAAGGCAAAGTTGAAGTGGGAGAAAGGGACAGCACTGGGAAATATCCATGATGCAGGAATCAAACTCAGAACAATTGAAGCGCAGTTGAGCTATTGGCGCAAACATAGTTTTTTTTAAACTTTAACAAGAATAATAAAATTGCGTTTGTTTCTTAACTCTAACAAATTAAATACGCTTTTTAAATCCTAACATTTAATGACAGCAATAAAACACAATACAGAAAAAAATGGAATCCTGAAATTGTTAAGCATTGTTTTATCGAATTTGGGAAATTAATTAAATAAAATTGAAAAAAATCTTAGGTCCTTAATGGTATAAAATTATTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38081
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Nonsense 239 774 6 18
ENSDART00000137612 Nonsense 53 584 2 14
Genomic Location (Zv9):
Chromosome 25 (position 24340290)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23519403
GRCz11 25 23616951
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACTTTAAATAAATTTGTTTCACACTTTCAGGTCAGCGACTGGTGGGAA[G/T]AGTACATTTACCTCAGAGGTCGAAGTCCAATCATGGTCAACAGCAATTAC
Long Flanking Sequence:
AGCATCATACAGTAAAAATCCGTCATCTTGACATGCAACACTTTCTGGTTCAAAGCGTGTAAAGATTTTGGACATCTTCTTAGACACTTTTAATGCTTCTAAACAGTATGCTGCAATTATAAAGTGCCCATGTCTTGAGGTAGTTCAGTATGATGCGATTTACCTATGTGCGATTTAAATTGACAGGAATCACATGACTGATTTTGCTAATCCCCGTAGACAAGAAAAAATAAAGTAGTGACTGCAGGTCGAAGGAAATAGTGAAGTAAAAGTACCAATACAGCCCTAAAAATGTACTCAGGTGAAAGTAAAAGTACACCGTTTTTAAAACTACTTATTCCTGAGAAAAACTACTCAATTACTGTAGTGAGTATTTGTCATTTGTTATTTTACACCACTGGCCATACTTTAAATAATACATACATTAAATAATTAATAATACATTAAATAATACTTTAAATAAATTTGTTTCACACTTTCAGGTCAGCGACTGGTGGGAA[G/T]AGTACATTTACCTCAGAGGTCGAAGTCCAATCATGGTCAACAGCAATTACTATGCAATGGTAAGGCTGCTATGCACTCCATAAGCTCACTGACACGAAAACAGTTGATGGGGTATACAACTTGTAAATTATTCAGTCACAAGATTATGCCAAACAGTCAAAAACGCATATCAAATGACAGCAATTACTCAAATGCCCACAAACGTCTAAACAAAGAGTCGCTGTCATTTCTGAAGGAGATTCGCCAGCATGACCAAGTTGTGGATTACTTCAGAAGACTAACTCAATCTGACGATGCATTATTTAGAGGATGATAAGTCATCCAAAGAATCCAAAAGTAATCCATCATAATATGAGAGAAATCAACAGTTTTATGTTGGTGTCACATTCTTTTTGTGTAGTGATTTCTAAAAAATGTTGTTTGCGTTTTTGTTTTTATAAGGACTTCCTGTATGTGAATCCCACTTCACTCCAAGCTGCTCGAGCTGGTAATTCCATCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38082
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Nonsense 256 774 6 18
ENSDART00000137612 Nonsense 70 584 2 14
Genomic Location (Zv9):
Chromosome 25 (position 24340343)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23519456
GRCz11 25 23617004
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACATTTACCTCAGAGGTCGAAGTCCAATCATGGTCAACAGCAATTACTA[T/A]GCAATGGTAAGGCTGCTATGCACTCCATAAGCTCACTGACACGAAAACAG
Long Flanking Sequence:
AGCGTGTAAAGATTTTGGACATCTTCTTAGACACTTTTAATGCTTCTAAACAGTATGCTGCAATTATAAAGTGCCCATGTCTTGAGGTAGTTCAGTATGATGCGATTTACCTATGTGCGATTTAAATTGACAGGAATCACATGACTGATTTTGCTAATCCCCGTAGACAAGAAAAAATAAAGTAGTGACTGCAGGTCGAAGGAAATAGTGAAGTAAAAGTACCAATACAGCCCTAAAAATGTACTCAGGTGAAAGTAAAAGTACACCGTTTTTAAAACTACTTATTCCTGAGAAAAACTACTCAATTACTGTAGTGAGTATTTGTCATTTGTTATTTTACACCACTGGCCATACTTTAAATAATACATACATTAAATAATTAATAATACATTAAATAATACTTTAAATAAATTTGTTTCACACTTTCAGGTCAGCGACTGGTGGGAAGAGTACATTTACCTCAGAGGTCGAAGTCCAATCATGGTCAACAGCAATTACTA[T/A]GCAATGGTAAGGCTGCTATGCACTCCATAAGCTCACTGACACGAAAACAGTTGATGGGGTATACAACTTGTAAATTATTCAGTCACAAGATTATGCCAAACAGTCAAAAACGCATATCAAATGACAGCAATTACTCAAATGCCCACAAACGTCTAAACAAAGAGTCGCTGTCATTTCTGAAGGAGATTCGCCAGCATGACCAAGTTGTGGATTACTTCAGAAGACTAACTCAATCTGACGATGCATTATTTAGAGGATGATAAGTCATCCAAAGAATCCAAAAGTAATCCATCATAATATGAGAGAAATCAACAGTTTTATGTTGGTGTCACATTCTTTTTGTGTAGTGATTTCTAAAAAATGTTGTTTGCGTTTTTGTTTTTATAAGGACTTCCTGTATGTGAATCCCACTTCACTCCAAGCTGCTCGAGCTGGTAATTCCATCCATGCCATGATGATGTACAGGAGAAAACTGGACAGAGCACAGATCAAACCTGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24683
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Essential Splice Site 626 774 15 18
ENSDART00000137612 Essential Splice Site 436 584 11 14
Genomic Location (Zv9):
Chromosome 25 (position 24359359)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23538472
GRCz11 25 23636020
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGCAAATTTCAGTAATCATTCTATTTCATGAATCTTTTTTTTTTCCTC[A/T]GAGAGAAGAGAGACTGAAGCTGCTGAAGGCGGCCACAGAAAAGCACCAGA
Long Flanking Sequence:
TATTTAACCGACTATATTTTCGATGCAGTAAAAGATACTCCATGAACTTGAAAATAGCCAATCTTTTGCCGGACGTGTTCAGTTGCTAAACAGCACTTCTGTGCATATAAACCAATTCATAAATAAGAACACGGTTTACATAAGTTCTGCTTGGCTAAAATAGTTTTAAAACATACCTGTCTAAAAGAAGTACTTCAGCCAAGTTGTGAACCTTCAGATCGTTGTTTTGAACTGCATAGCGTCATTTCTGTCCAGCCTGCAAAAGTAATTCTGATATTGATCCTGGTTGATGCAAGTTAAACCATTCTAAGAAAAGAAAAAGTCAAACATATATATTTTCTTAATAGATCTATCATGATGCATGCAGTAGTTAGTATTCTGAATGATCCTCGTTACCTGGGGATAAACTTGCCTTGCTACTGTACAGTAGTTCTAGTGAGTGTGTTTGTTTCTGCAAATTTCAGTAATCATTCTATTTCATGAATCTTTTTTTTTTCCTC[A/T]GAGAGAAGAGAGACTGAAGCTGCTGAAGGCGGCCACAGAAAAGCACCAGAATTTATACAAACTGGCCATGACTGGAAAAGGCATTGACCGTCATCTTTTCTGCCTCTACTTAGTGTCCAAGTACCTCGGTGAAGATTCACCTTTCCTCAAAGAGGTTTGTGAGCGACCTGTAACAAAACAATCTGCAAATCTATCAGTTTTGTAGCCTAGAAACATTACATAGTCTGTAACGAGCTGGGTTTGATCCAGGTTTTGTCAGAGCCCTGGAGGTTGTCCACCAGTCAGACTCCTCTCCAGCAGATGGAACTCTTTGACTTGAAGAAACATCCAGAATATGTCACCAGTGGAGGTGGATTTGGACCTGTAAGTTCATTTTGTATCAATATTTTATCCTGCCTAGACAAGGTGCAATGACAACTGGTGTTCAGATTATTCTTCAAAAGTGTTGTTTTTTTTTTTTTGAAAGGAAACAGACGCATTGCAAGTTTTTATTGTTTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25226
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000089199 Nonsense 643 774 15 18
ENSDART00000137612 Nonsense 453 584 11 14
Genomic Location (Zv9):
Chromosome 25 (position 24359413)
Other Location(s):
Assembly Chromosome Position
GRCz10 25 23538526
GRCz11 25 23636074
KASP Assay ID:
554-7594.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAAGAGAGACTGAAGCTGCTGAAGGCGGCCACAGAAAAGCACCAGAATT[T/A]ATACAAACTGGCCATGACTGGAAAAGGCATTGACCGTCATCTTTTCTGCC
Long Flanking Sequence:
TAGCCAATCTTTTGCCGGACGTGTTCAGTTGCTAAACAGCACTTCTGTGCATATAAACCAATTCATAAATAAGAACACGGTTTACATAAGTTCTGCTTGGCTAAAATAGTTTTAAAACATACCTGTCTAAAAGAAGTACTTCAGCCAAGTTGTGAACCTTCAGATCGTTGTTTTGAACTGCATAGCGTCATTTCTGTCCAGCCTGCAAAAGTAATTCTGATATTGATCCTGGTTGATGCAAGTTAAACCATTCTAAGAAAAGAAAAAGTCAAACATATATATTTTCTTAATAGATCTATCATGATGCATGCAGTAGTTAGTATTCTGAATGATCCTCGTTACCTGGGGATAAACTTGCCTTGCTACTGTACAGTAGTTCTAGTGAGTGTGTTTGTTTCTGCAAATTTCAGTAATCATTCTATTTCATGAATCTTTTTTTTTTCCTCAGAGAGAAGAGAGACTGAAGCTGCTGAAGGCGGCCACAGAAAAGCACCAGAATT[T/A]ATACAAACTGGCCATGACTGGAAAAGGCATTGACCGTCATCTTTTCTGCCTCTACTTAGTGTCCAAGTACCTCGGTGAAGATTCACCTTTCCTCAAAGAGGTTTGTGAGCGACCTGTAACAAAACAATCTGCAAATCTATCAGTTTTGTAGCCTAGAAACATTACATAGTCTGTAACGAGCTGGGTTTGATCCAGGTTTTGTCAGAGCCCTGGAGGTTGTCCACCAGTCAGACTCCTCTCCAGCAGATGGAACTCTTTGACTTGAAGAAACATCCAGAATATGTCACCAGTGGAGGTGGATTTGGACCTGTAAGTTCATTTTGTATCAATATTTTATCCTGCCTAGACAAGGTGCAATGACAACTGGTGTTCAGATTATTCTTCAAAAGTGTTGTTTTTTTTTTTTTGAAAGGAAACAGACGCATTGCAAGTTTTTATTGTTTTATAATATTGGTGTAAATGTTTTTTTTTTTTTATTTAAATACAAATTTATATAATAT
Associated Phenotype:
Not determined