Busch Lab

ZMP

si:ch211-197g15.12

Ensembl ID:
ENSDARG00000061757
ZFIN ID:
ZDB-GENE-050208-389
Description:
Novel GTPase activating protein [Source:UniProtKB/TrEMBL;Acc:Q1LVY2]
Human Orthologue:
RABGAP1L
Human Description:
RAB GTPase activating protein 1-like [Source:HGNC Symbol;Acc:24663]
Mouse Orthologue:
Rabgap1l
Mouse Description:
RAB GTPase activating protein 1-like Gene [Source:MGI Symbol;Acc:MGI:1352507]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa10812 Nonsense Available for shipment Available now
sa24140 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa10812
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088460 Nonsense 63 1043 2 26
ENSDART00000139523 None None 302 None 8
ENSDART00000145769 None None 475 None 13
ENSDART00000088460 Nonsense 63 1043 2 26
ENSDART00000139523 None None 302 None 8
ENSDART00000145769 None None 475 None 13

The following transcripts of ENSDARG00000061757 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 22 (position 17537373)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 17288409
GRCz11 22 17313398
KASP Assay ID:
2261-6682.1 (used for ordering genotyping assays)
KASP Sequence:
GATGTCGTGGAATGGGAGTGAGCAGCTGGAGCGGGCGATGGAGGAGGTGT[T/A]GGATGATGTTGCTGATGGAGCAGGAGCTGAAMAGGAGAAGGGATGCACTC
Long Flanking Sequence:
AGAAGTGATAAAGAGATCCCCAAAATGTCATCTGTAAAAGCCTGTAATATTTCAGACAAGCTGTATAGAAGTGTTTTGAAAAATATCCAGTCAAATAATATTTACTGTCATCAGGGCAAAGATAAAATAAATCAGTTATTAGAAATGAGTTATTAAAACTATTATGTTTAGAAATGTGTTGACAAAATCTTCTCTCTGTTAAACAGAAATTGAGGAAAACAATAAACAGGGGCTAAAAATTCAGGGGGGCTTATAATTCTTTCGGAGCGTTCAGATTTCATCTTAAAAAAACTTTATTTGAAGACAAACAAAAGTCTCAAGGGATTGAAACAACATGATGTTCGCTAATTAATAACAGAATTTCCCTTTTTGTTTAAAGTACCCCTTTACTCTGATTTTATCCTGTGTTTGAGAATGTTGTGTTGTGTAACCTGCATTGTGTTTGTCTCAGATGTCGTGGAATGGGAGTGAGCAGCTGGAGCGGGCGATGGAGGAGGTGT[T/A]GGATGATGTTGCTGATGGAGCAGGAGCTGAACAGGAGAAGGGATGCACTCAGATCAGACCGCCCAGTCTGGACACAGCTCCACACGGTACATGCTGCTCAAAGACACAACAGCAAATCTTCATCATTGTTATGTCAATTCTTTATGAAAAGCCGACAAAATTATATTGATTTTATGAATCAACCTGACATTGCTTTGACTTTGTTTTCCTCGATATAACGCATTATACAAATAACATGTAATGCATTTTACAAATAAACAAAAAAATTGTAACCTTTAAAAATCAGACAAAATGATATGTTGGGAATATTAATATTTAGTTATAGATGTAAATTAATGCATATATTATACATTTTATATGTTTGTGTAAATTATTAAATATTTTCAGGATACTTTTGCTGGTTCAACTGATTGATCAGCCAGATTTTTTTTATGCTAAACTTGTAATGCATTAATTGATCCATTAATTGATAATACCTATTCATTATATTTATTTTTTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24140
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088460 Essential Splice Site 244 1043 6 26
ENSDART00000139523 None None 302 None 8
ENSDART00000145769 None None 475 None 13

The following transcripts of ENSDARG00000061757 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 22 (position 17542261)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 17293297
GRCz11 22 17318286
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACATTAAACCCAATCTTTCAAACCCTTTTTTTATTTATTTATATTTTT[A/T]GGTTAGTCGCATCCTCTATAGCTTCTCGACGGCCTTCAAGCGTTCGGCAA
Long Flanking Sequence:
GTGTGTGTGTACATACATATATACATCACATTGTAGTAATTTTGGACTGTATGTGCATGCTCGCTTTATGGAGATCCTTGCATAATTGTATTTTGTATGCAAAATAATTGTATACATATAACTCTTTGCTTTATTTATGTGCTATGTTAAGTTAAAAGTAAACCTTTGCATGTACCTGGAAACTCTAGGTTTCACACACAGTTTTAGTTATAGGTCTGTTATGTTTTTAATGATTCCAGGATCGTGGACCAGGCCAGCGGAACAGAAATAGCGTCTTTTCCCATCTATAAGGTGTTGTTTTGCGCACGAGGATGCGAGGGATCTGTTGAGAGTGACTGCTTTTCTTTCACTGAGAGCTACCGCAGCTCTGAGGACTTTCAGATTCACGTCTTTTCCTGCCATATCAAAGAGGCGGTGAGTTTCATCTCTTCATTAAAGTAGTCTTGAAACCCACATTAAACCCAATCTTTCAAACCCTTTTTTTATTTATTTATATTTTT[A/T]GGTTAGTCGCATCCTCTATAGCTTCTCGACGGCCTTCAAGCGTTCGGCAAAAGCTGCCACAGAGATGCAAGACTCGCCGTTGCCACTTTCCCCTGACAGCGACGTTTTCACTTTTAGTGTTTCTCTAGAAGTGAGAGAAGATGATGGGAAAGGAAACTTCAGGTCGCTCTTTACTCGCTTCTGAAAAAGCTTGTTTCTGCTTTTGTCTCATGCTTTCAGCACTGTTGCTTTATTTAAATTTCTGGCCAACCAAATGTAAGTGACACTTTTTATTTTTGTATTCTTCTTTTAACTTGTAGTCCAGTTCCCAAAGACAGAGATAAATATTACTTCAAGCTGCGGCAGGGCGTACAGAAGAAAGTGTCTGTGGTTGTCCAGCAGCTAAACAATAAGGAGCTGGTCATAGAGCGGTGGGTTATGAGACGCTGTTTCCAGAGCGACAAATTCACACCTTTTCTCCCTTTTCAGAACTGGATTTTGTGTTATAATGGCTAAACTTA
Associated Phenotype:
Not determined