ZMP
zgc:153086
Ensembl ID:
ZFIN ID:
Description:
Protein FAM55C [Source:UniProtKB/Swiss-Prot;Acc:Q08BN9]
Human Orthologue:
FAM55C
Human Description:
family with sequence similarity 55, member C [Source:HGNC Symbol;Acc:28238]
Mouse Orthologue:
Fam55c
Mouse Description:
family with sequence similarity 55, member C Gene [Source:MGI Symbol;Acc:MGI:2686598]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa1755 | Essential Splice Site | Available for shipment | Available now |
sa21533 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1755
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088261 | Essential Splice Site | None | 566 | 1 | 6 |
ENSDART00000132836 | Essential Splice Site | None | 567 | 1 | 6 |
ENSDART00000139157 | None | None | 156 | None | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 35204049)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 34423560 |
GRCz11 | 9 | 34232745 |
KASP Assay ID:
554-1748.1 (used for ordering genotyping assays)
KASP Sequence:
ACGCTGTCAGCAGCAGCGGCGCTKCAGTACTGCAACATCGTTGCAGATGG[T/G]GAGTATATTMAGTCACCATATTTGGCTATAGCCCCCAACATTTAGACAAA
Long Flanking Sequence:
TGTAATTTTACAGAACTACACGTGGTGTCTTTGGCTTATACTTGTAGACAAAGCATTTTATGTTTTCAAATGTAAAATTTCAAAGAATGTTACATTTGTGGCTGTTTAACTTAATGTGACTCGTTTTAATGCAGAGTAGCGTTCTTAGACGTAAATTCACCGTATTTTAGTAAACAATCCAACCTAAAACGCGATGAAAATGCGTGATGTTATTTCCCGCGGAAGCGTAATATGTGACATCACGATAATCTGCTTTCCGCTGCTTTCTTCTGTTTACACATGGGGCGGAAATGAGGATGCGTGCTTGAGTGTTAGCAAAGCGTCTGGACGTATATAGGCTGCTCGTTGTTCTTTAATCTTATCTACTGATGTCCGCTTAAGGCACTGGATTATTTAGTTAATATCTGGTGGACTGTTGTTCTTGATGTTGGCGTCATGAGGGATAAAACAACGCTGTCAGCAGCAGCGGCGCTGCAGTACTGCAACATCGTTGCAGATGG[T/G]GAGTATATTCAGTCACCATATTTGGCTATAGCCCCCAACATTTAGACAAATGCTTACATGAGAAACAGTTGCAAGCTTACAGCGTTGTATACCTCCTTTTAATATCTGCGGAATCTTAACAGCATCCTTGATTCGGTCTTGCAACAAAATAAAGTTGACTTGGCACTTGGTGTTTTTAACATGCAAGAGCTATATGGGAGGCTGAGAGCTAAGTTGTTTGGCAAATTTGAATTGTTTAGCGACAGTTAGATTTGCTGGTTTATTCCACCTTGATGTATTGTTCTGAAGCAAGACAGACCAAAGAACAACAACACGAAGAGAAACAATGTTCAGTCAGTTCTAAAATCTGAAATTAATACTAAATTATACATACATAAAGCACATCTATCTATCTATCTATCTATGAAGTGTTTTTGTTGCCTTTTCCTTTTTTTGCATTATCCTTCTCCTAATCGCCTTTCTACAACTTTATCCCAAAGGTCTTTTGAAAGCATGTTGTA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa21533
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000088261 | Nonsense | 29 | 566 | 2 | 6 |
ENSDART00000132836 | Nonsense | 30 | 567 | 2 | 6 |
ENSDART00000139157 | Nonsense | 30 | 156 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 9 (position 35208148)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 34427659 |
GRCz11 | 9 | 34236844 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGTCTGCTGGCGCTGTCAGGACTGCTGTATCTGCTGTGGAGCATCACCT[C/A]GCTGGAGGTGAGCAGAAGTCTCAGCTTGACTTTTAGATGGTGGTTTGTGG
Long Flanking Sequence:
GTAAAGTGCTGCACTGTACTGTATGTTGTACACTCAAATGTTTTACTAGTACTTTGTGTTTGCTTTTGGGAAAAGTTCATCTTGACACATCTGTCATAAGAGCAATTTAATTTTTACTGGAGTTAATCTTTAACATGTGCCACTGGAGTGTAGCTTTAGCTTGCCATGCCTAATTTGCATTTTAATTAGAGAATTTATTAACTATTGAATTTTGAATAGAGAGAGAGCAGCTTGATGGAATGATGATTACCTCTTTTTAAGTGTTTCTGTGGACCTGCACCCATTGTAAGTTGAATACTGCTGCTTACATGTTTTTTTGGTCTGTCTTTTTCTTTTTCTTTTTGCTTAGCATGCAATAATGGCCAGCCATGAGCAACTGTAGTGGTGGACAGAAGGATGACCGAGAGAGGAAATGATGGAGAAATACTTTCCCAAATACGTCCCTTTCTTCAGTCTGCTGGCGCTGTCAGGACTGCTGTATCTGCTGTGGAGCATCACCT[C/A]GCTGGAGGTGAGCAGAAGTCTCAGCTTGACTTTTAGATGGTGGTTTGTGGCTATACAGTACAACAACAGGATGTACAGTGTCAATTCAGTATGCAGCAGATATTCATTTAGGATGATGTGATTTAGCACGCCATTGAAGTAGAATTAGATTTATTTATTAGGTTCTGGTTTTGTTTGTACAGAAACATATGAGGTTGGACAGGAATTTACTTTTTAAAGCATTTTTATGTTTTTTTAAATACATAAATTCATATTTACTTTATACTTTAATAAACAGCACATTTCTCTTAGACTCAGTAAAAAAAATAATAATAAAAAACGCATAACATGAGATTTTAAAGACTCTTCGAGGTCGTTTGACATTTAAAATACCAATGGACACTGGCATAACTCCTTATGTTGATTACTTTTACACAAGGAATTCCTGCTTCATCGCTTTTCAATGGAAGTACTTCATACATTGGAAATAAAACATGATTCAAATTGCATTACTTGTGCAT
Associated Phenotype:
Not determined